eF-site ID 1dbt-ABC
PDB Code 1dbt
Chain A, B, C

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Title CRYSTAL STRUCTURE OF OROTIDINE 5'-MONOPHOSPHATE DECARBOXYLASE FROM BACILLUS SUBTILIS COMPLEXED WITH UMP
Classification LYASE
Compound OROTIDINE 5'-PHOSPHATE DECARBOXYLASE
Source Bacillus subtilis (PYRF_BACSU)
Sequence A:  MKNNLPIIALDFASAEETLAFLAPFQQEPLFVKVGMELFY
QEGPSIVKQLKERNCELFLDLKLHDIPTTVNKAMKRLASL
GVDLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIAVT
QLTSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVV
CSVHEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATP
AIAREKGSSAIVVGRSITKAEDPVKAYKAVRLEWEGI
B:  NNLPIIALDFASAEETLAFLAPFQQEPLFVKVGMELFYQE
GPSIVKQLKERNCELFLDLKLHDIPTTVNKAMKRLASLGV
DLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIAVTQL
TSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCS
VHEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAI
AREKGSSAIVVGRSITKAEDPVKAYKAVRLEWEG
C:  NNLPIIALDFASAEETLAFLAPFQQEPLFVKVGMELFYQE
GPSIVKQLKERNCELFLDLKLHDIPTTVNKAMKRLASLGV
DLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIAVTQL
TSTSEQIMKDELLIEKSLIDTVVHYSKQAEESGLDGVVCS
VHEAKAIYQAVSPSFLTVTPGIRMSEDAANDQVRVATPAI
AREKGSSAIVVGRSITKAEDPVKAYKAVRLEWEG
Description


Functional site

1) chain A
residue 11
type
sequence D
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

2) chain A
residue 33
type
sequence K
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

3) chain A
residue 62
type
sequence K
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

4) chain A
residue 122
type
sequence L
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

5) chain A
residue 123
type
sequence T
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

6) chain A
residue 160
type
sequence V
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

7) chain A
residue 182
type
sequence P
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

8) chain A
residue 185
type
sequence R
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

9) chain A
residue 194
type
sequence Q
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

10) chain A
residue 212
type
sequence V
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

11) chain A
residue 214
type
sequence G
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

12) chain A
residue 215
type
sequence R
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

13) chain B
residue 65
type
sequence D
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

14) chain B
residue 66
type
sequence I
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

15) chain B
residue 69
type
sequence T
description BINDING SITE FOR RESIDUE U5P A 250
source : AC1

16) chain A
residue 65
type
sequence D
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

17) chain A
residue 66
type
sequence I
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

18) chain A
residue 69
type
sequence T
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

19) chain B
residue 11
type
sequence D
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

20) chain B
residue 33
type
sequence K
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

21) chain B
residue 62
type
sequence K
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

22) chain B
residue 122
type
sequence L
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

23) chain B
residue 123
type
sequence T
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

24) chain B
residue 160
type
sequence V
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

25) chain B
residue 182
type
sequence P
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

26) chain B
residue 185
type
sequence R
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

27) chain B
residue 194
type
sequence Q
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

28) chain B
residue 212
type
sequence V
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

29) chain B
residue 214
type
sequence G
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

30) chain B
residue 215
type
sequence R
description BINDING SITE FOR RESIDUE U5P B 251
source : AC2

31) chain C
residue 11
type
sequence D
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

32) chain C
residue 33
type
sequence K
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

33) chain C
residue 62
type
sequence K
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

34) chain C
residue 65
type
sequence D
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

35) chain C
residue 66
type
sequence I
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

36) chain C
residue 69
type
sequence T
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

37) chain C
residue 122
type
sequence L
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

38) chain C
residue 123
type
sequence T
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

39) chain C
residue 160
type
sequence V
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

40) chain C
residue 182
type
sequence P
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

41) chain C
residue 185
type
sequence R
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

42) chain C
residue 194
type
sequence Q
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

43) chain C
residue 212
type
sequence V
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

44) chain C
residue 214
type
sequence G
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

45) chain C
residue 215
type
sequence R
description BINDING SITE FOR RESIDUE U5P C 252
source : AC3

46) chain A
residue 11
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

47) chain B
residue 33
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

48) chain B
residue 60
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

49) chain B
residue 123
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI2

50) chain B
residue 185
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

51) chain B
residue 194
type BINDING
sequence Q
description
source Swiss-Prot : SWS_FT_FI2

52) chain B
residue 214
type BINDING
sequence G
description
source Swiss-Prot : SWS_FT_FI2

53) chain B
residue 215
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

54) chain C
residue 11
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

55) chain C
residue 33
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

56) chain C
residue 60
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

57) chain A
residue 33
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

58) chain C
residue 123
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI2

59) chain C
residue 185
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

60) chain C
residue 194
type BINDING
sequence Q
description
source Swiss-Prot : SWS_FT_FI2

61) chain C
residue 214
type BINDING
sequence G
description
source Swiss-Prot : SWS_FT_FI2

62) chain C
residue 215
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

63) chain A
residue 60
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

64) chain A
residue 123
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI2

65) chain A
residue 185
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

66) chain A
residue 194
type BINDING
sequence Q
description
source Swiss-Prot : SWS_FT_FI2

67) chain A
residue 214
type BINDING
sequence G
description
source Swiss-Prot : SWS_FT_FI2

68) chain A
residue 215
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

69) chain B
residue 11
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI2

70) chain A
residue 62
type ACT_SITE
sequence K
description Proton donor
source Swiss-Prot : SWS_FT_FI1

71) chain B
residue 62
type ACT_SITE
sequence K
description Proton donor
source Swiss-Prot : SWS_FT_FI1

72) chain C
residue 62
type ACT_SITE
sequence K
description Proton donor
source Swiss-Prot : SWS_FT_FI1

73) chain A
residue 33
type catalytic
sequence K
description 50
source MCSA : MCSA1

74) chain A
residue 60
type catalytic
sequence D
description 50
source MCSA : MCSA1

75) chain A
residue 62
type catalytic
sequence K
description 50
source MCSA : MCSA1

76) chain A
residue 65
type catalytic
sequence D
description 50
source MCSA : MCSA1

77) chain A
residue 123
type catalytic
sequence T
description 50
source MCSA : MCSA1

78) chain A
residue 215
type catalytic
sequence R
description 50
source MCSA : MCSA1

79) chain B
residue 33
type catalytic
sequence K
description 50
source MCSA : MCSA2

80) chain B
residue 60
type catalytic
sequence D
description 50
source MCSA : MCSA2

81) chain B
residue 62
type catalytic
sequence K
description 50
source MCSA : MCSA2

82) chain B
residue 65
type catalytic
sequence D
description 50
source MCSA : MCSA2

83) chain B
residue 123
type catalytic
sequence T
description 50
source MCSA : MCSA2

84) chain B
residue 215
type catalytic
sequence R
description 50
source MCSA : MCSA2

85) chain C
residue 33
type catalytic
sequence K
description 50
source MCSA : MCSA3

86) chain C
residue 60
type catalytic
sequence D
description 50
source MCSA : MCSA3

87) chain C
residue 62
type catalytic
sequence K
description 50
source MCSA : MCSA3

88) chain C
residue 65
type catalytic
sequence D
description 50
source MCSA : MCSA3

89) chain C
residue 123
type catalytic
sequence T
description 50
source MCSA : MCSA3

90) chain C
residue 215
type catalytic
sequence R
description 50
source MCSA : MCSA3

91) chain A
residue 57-70
type prosite
sequence LFLDLKLHDIPTTV
description OMPDECASE Orotidine 5'-phosphate decarboxylase active site. LFlDlKlhDIPtTV
source prosite : PS00156


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