eF-site ID 1cl8-B
PDB Code 1cl8
Chain B

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Title A PRE-TRANSITION STATE ECO RI ENDONUCLEASE/COGNATE DNA (TCGCGAPTTCGCG) COMPLEX WITH DNA BASE ANALOG PURINE (P)
Classification PROTEIN/DNA
Compound DNA (5'-D(*TP*CP*GP*CP*GP*AP*(PRN)P*TP*TP*CP*GP*CP*G)-3')
Source ORGANISM_SCIENTIFIC: Escherichia coli;
Sequence B:  TCGCGAXTTCGCG
Description


Functional site

1) chain B
residue 6
type
sequence A
description PROTEIN RECOGNTION RESIDUES INVOLVED IN HYDROGEN BONDING CONTACTS AT THE SITE OF PERTURBATION
source : PER

2) chain B
residue 7
type
sequence X
description PROTEIN RECOGNTION RESIDUES INVOLVED IN HYDROGEN BONDING CONTACTS AT THE SITE OF PERTURBATION
source : PER

3) chain B
residue 8
type
sequence T
description PROTEIN RECOGNTION RESIDUES INVOLVED IN HYDROGEN BONDING CONTACTS AT THE SITE OF PERTURBATION
source : PER

4) chain B
residue 9
type
sequence T
description PROTEIN RECOGNTION RESIDUES INVOLVED IN HYDROGEN BONDING CONTACTS AT THE SITE OF PERTURBATION
source : PER

5) chain B
residue 5
type
sequence G
description DNA RECOGNITION SEQUENCE
source : DNA

6) chain B
residue 6
type
sequence A
description DNA RECOGNITION SEQUENCE
source : DNA

7) chain B
residue 7
type
sequence X
description DNA RECOGNITION SEQUENCE
source : DNA

8) chain B
residue 8
type
sequence T
description DNA RECOGNITION SEQUENCE
source : DNA

9) chain B
residue 9
type
sequence T
description DNA RECOGNITION SEQUENCE
source : DNA

10) chain B
residue 10
type
sequence C
description DNA RECOGNITION SEQUENCE
source : DNA


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