eF-site ID 1cl8-AB PDB Code 1cl8 Chain A, B click to enlarge Title A PRE-TRANSITION STATE ECO RI ENDONUCLEASE/COGNATE DNA (TCGCGAPTTCGCG) COMPLEX WITH DNA BASE ANALOG PURINE (P) Classification PROTEIN/DNA Compound DNA (5'-D(*TP*CP*GP*CP*GP*AP*(PRN)P*TP*TP*CP*GP*CP*G)-3') Source ORGANISM_SCIENTIFIC: Escherichia coli; Sequence A:  SQGVIGIFGDYAKAHDLAVGEVSKLVKKALSNEYPQLSFR YRDSIKKTEINEALKKIDPDLGGTLFVSNSSIKPDGGIVE VKDDYGEWRVVLVAEAKHQGKDIINIRNGLLVGKRGDQDL MAAGNAIERSHKNISEIANFMLSESHFPYVLFLEGSNFLT ENISITRPDGRVVNLEYNSGILNRLDRLTAANYGMPINSN LCINKFVNHKDKSIMLQAASIYTQGDGREWDSKIMFEIMF DISTTSLRVLGRDLFEQLTSK B:  TCGCGAXTTCGCG Description Functional site 1) chain A residue 142 type sequence A description PROTEIN RECOGNTION RESIDUES INVOLVED IN HYDROGEN BONDING CONTACTS AT THE SITE OF PERTURBATION source : PER 2) chain A residue 141 type sequence N description PROTEIN RECOGNTION RESIDUES INVOLVED IN HYDROGEN BONDING CONTACTS AT THE SITE OF PERTURBATION source : PER 3) chain B residue 6 type sequence A description PROTEIN RECOGNTION RESIDUES INVOLVED IN HYDROGEN BONDING CONTACTS AT THE SITE OF PERTURBATION source : PER 4) chain B residue 7 type sequence X description PROTEIN RECOGNTION RESIDUES INVOLVED IN HYDROGEN BONDING CONTACTS AT THE SITE OF PERTURBATION source : PER 5) chain B residue 8 type sequence T description PROTEIN RECOGNTION RESIDUES INVOLVED IN HYDROGEN BONDING CONTACTS AT THE SITE OF PERTURBATION source : PER 6) chain B residue 9 type sequence T description PROTEIN RECOGNTION RESIDUES INVOLVED IN HYDROGEN BONDING CONTACTS AT THE SITE OF PERTURBATION source : PER 7) chain B residue 5 type sequence G description DNA RECOGNITION SEQUENCE source : DNA 8) chain B residue 6 type sequence A description DNA RECOGNITION SEQUENCE source : DNA 9) chain B residue 7 type sequence X description DNA RECOGNITION SEQUENCE source : DNA 10) chain B residue 8 type sequence T description DNA RECOGNITION SEQUENCE source : DNA 11) chain B residue 9 type sequence T description DNA RECOGNITION SEQUENCE source : DNA 12) chain B residue 10 type sequence C description DNA RECOGNITION SEQUENCE source : DNA 13) chain A residue 92 type BINDING sequence G description source Swiss-Prot : SWS_FT_FI2 14) chain A residue 112 type BINDING sequence A description source Swiss-Prot : SWS_FT_FI2 15) chain A residue 92 type ACT_SITE sequence G description source Swiss-Prot : SWS_FT_FI1 16) chain A residue 112 type ACT_SITE sequence A description source Swiss-Prot : SWS_FT_FI1 17) chain A residue 114 type ACT_SITE sequence H description source Swiss-Prot : SWS_FT_FI1

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