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eF-site ID
|
1cl8-A |
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PDB Code
|
1cl8 |
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Chain
|
A |
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click to enlarge
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Title
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A PRE-TRANSITION STATE ECO RI ENDONUCLEASE/COGNATE DNA (TCGCGAPTTCGCG) COMPLEX WITH DNA BASE ANALOG PURINE (P) |
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Classification
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PROTEIN/DNA |
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Compound
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DNA (5'-D(*TP*CP*GP*CP*GP*AP*(PRN)P*TP*TP*CP*GP*CP*G)-3') |
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Source
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ORGANISM_SCIENTIFIC: Escherichia coli; |
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Sequence
|
A: |
SQGVIGIFGDYAKAHDLAVGEVSKLVKKALSNEYPQLSFR
YRDSIKKTEINEALKKIDPDLGGTLFVSNSSIKPDGGIVE
VKDDYGEWRVVLVAEAKHQGKDIINIRNGLLVGKRGDQDL
MAAGNAIERSHKNISEIANFMLSESHFPYVLFLEGSNFLT
ENISITRPDGRVVNLEYNSGILNRLDRLTAANYGMPINSN
LCINKFVNHKDKSIMLQAASIYTQGDGREWDSKIMFEIMF
DISTTSLRVLGRDLFEQLTSK
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Description
|
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Functional site
|
|
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1)
|
chain |
A |
| residue |
142 |
| type |
|
| sequence |
A
|
| description |
PROTEIN RECOGNTION RESIDUES INVOLVED IN HYDROGEN BONDING CONTACTS AT THE SITE OF PERTURBATION
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| source |
: PER
|
|
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2)
|
chain |
A |
| residue |
141 |
| type |
|
| sequence |
N
|
| description |
PROTEIN RECOGNTION RESIDUES INVOLVED IN HYDROGEN BONDING CONTACTS AT THE SITE OF PERTURBATION
|
| source |
: PER
|
|
|
3)
|
chain |
A |
| residue |
92 |
| type |
BINDING |
| sequence |
G
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
4)
|
chain |
A |
| residue |
112 |
| type |
BINDING |
| sequence |
A
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
5)
|
chain |
A |
| residue |
92 |
| type |
ACT_SITE |
| sequence |
G
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
6)
|
chain |
A |
| residue |
112 |
| type |
ACT_SITE |
| sequence |
A
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
7)
|
chain |
A |
| residue |
114 |
| type |
ACT_SITE |
| sequence |
H
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|