eF-site ID 1cdw-ABC
PDB Code 1cdw
Chain A, B, C

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Title HUMAN TBP CORE DOMAIN COMPLEXED WITH DNA
Classification TRANSCRIPTION/DNA
Compound DNA (5'-D(*CP*TP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*CP*TP*G)-3')
Source (1CDW)
Sequence A:  SGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFA
AVIMRIREPRTTALIFSSGKMVCTGAKSEENSRLAARKYA
RVVQKLGFPAKFLDFKIQNMVGSCDVKFPIRLEGLVLTHQ
QFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVR
AEIYEAFENIYPILKGFRK
B:  CTGCTATAAAAGGCTG
C:  CAGCCTTTTATAGCAG
Description


Functional site

1) chain A
residue 188-237
type prosite
sequence YNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEENSR
LAARKYARVV
description TFIID Transcription factor TFIID repeat signature. YnPkrFaaVImRirePRttaLIFsSGKMvctGAKseensrlAarkyarvV
source prosite : PS00351

2) chain A
residue 279-328
type prosite
sequence YEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIY
EAFENIYPIL
description TFIID Transcription factor TFIID repeat signature. YnPkrFaaVImRirePRttaLIFsSGKMvctGAKseensrlAarkyarvV
source prosite : PS00351

3) chain A
residue 163
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:27193682, ECO:0007744|PDB:5IYD
source Swiss-Prot : SWS_FT_FI1

4) chain A
residue 199
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27193682, ECO:0007744|PDB:5IYD
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 214
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:27193682, ECO:0007744|PDB:5IYD
source Swiss-Prot : SWS_FT_FI1

6) chain A
residue 253
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:27193682, ECO:0007744|PDB:5IYD
source Swiss-Prot : SWS_FT_FI1

7) chain A
residue 290
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:27193682, ECO:0007744|PDB:5IYD
source Swiss-Prot : SWS_FT_FI1


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