eF-site ID 1byu-B
PDB Code 1byu
Chain B

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Title CANINE GDP-RAN
Classification TRANSPORT PROTEIN
Compound PROTEIN (GTP-BINDING PROTEIN RAN)
Source Canis familiaris (Dog) (Canis lupus familiaris) (RAN_CANFA)
Sequence B:  AAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYVP
TLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYI
QAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCG
NKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPF
LWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDL
EVAQTTALPDEDDDL
Description


Functional site

1) chain B
residue 24
type
sequence T
description BINDING SITE FOR RESIDUE MG B 221
source : AC2

2) chain B
residue 20
type
sequence G
description BINDING SITE FOR RESIDUE GDP B 220
source : AC4

3) chain B
residue 21
type
sequence T
description BINDING SITE FOR RESIDUE GDP B 220
source : AC4

4) chain B
residue 22
type
sequence G
description BINDING SITE FOR RESIDUE GDP B 220
source : AC4

5) chain B
residue 23
type
sequence K
description BINDING SITE FOR RESIDUE GDP B 220
source : AC4

6) chain B
residue 24
type
sequence T
description BINDING SITE FOR RESIDUE GDP B 220
source : AC4

7) chain B
residue 25
type
sequence T
description BINDING SITE FOR RESIDUE GDP B 220
source : AC4

8) chain B
residue 122
type
sequence N
description BINDING SITE FOR RESIDUE GDP B 220
source : AC4

9) chain B
residue 123
type
sequence K
description BINDING SITE FOR RESIDUE GDP B 220
source : AC4

10) chain B
residue 125
type
sequence D
description BINDING SITE FOR RESIDUE GDP B 220
source : AC4

11) chain B
residue 151
type
sequence A
description BINDING SITE FOR RESIDUE GDP B 220
source : AC4

12) chain B
residue 152
type
sequence K
description BINDING SITE FOR RESIDUE GDP B 220
source : AC4

13) chain B
residue 36
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:15602554, ECO:0000269|PubMed:15864302, ECO:0000269|PubMed:19965479, ECO:0007744|PDB:1WA5, ECO:0007744|PDB:2BKU, ECO:0007744|PDB:3A6P, ECO:0007744|PDB:3W3Z
source Swiss-Prot : SWS_FT_FI2

14) chain B
residue 68
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:15602554, ECO:0000269|PubMed:15864302, ECO:0000269|PubMed:19965479, ECO:0007744|PDB:1WA5, ECO:0007744|PDB:2BKU, ECO:0007744|PDB:3W3Z
source Swiss-Prot : SWS_FT_FI3

15) chain B
residue 71
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P62826
source Swiss-Prot : SWS_FT_FI10

16) chain B
residue 69
type SITE
sequence Q
description Essential for GTP hydrolysis => ECO:0000250|UniProtKB:P62826
source Swiss-Prot : SWS_FT_FI4

17) chain B
residue 2
type MOD_RES
sequence A
description N-acetylalanine => ECO:0000250|UniProtKB:P62826
source Swiss-Prot : SWS_FT_FI5

18) chain B
residue 24
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:P62826
source Swiss-Prot : SWS_FT_FI6

19) chain B
residue 159
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P62827
source Swiss-Prot : SWS_FT_FI9

20) chain B
residue 18
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:15602554, ECO:0000269|PubMed:15864302, ECO:0000269|PubMed:19965479, ECO:0000269|PubMed:9533885, ECO:0000269|PubMed:9878368, ECO:0007744|PDB:1BYU, ECO:0007744|PDB:1WA5, ECO:0007744|PDB:2BKU, ECO:0007744|PDB:3A6P, ECO:0007744|PDB:3RAN, ECO:0007744|PDB:3W3Z, ECO:0007744|PDB:5BXQ
source Swiss-Prot : SWS_FT_FI1

21) chain B
residue 122
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:15602554, ECO:0000269|PubMed:15864302, ECO:0000269|PubMed:19965479, ECO:0000269|PubMed:9533885, ECO:0000269|PubMed:9878368, ECO:0007744|PDB:1BYU, ECO:0007744|PDB:1WA5, ECO:0007744|PDB:2BKU, ECO:0007744|PDB:3A6P, ECO:0007744|PDB:3RAN, ECO:0007744|PDB:3W3Z, ECO:0007744|PDB:5BXQ
source Swiss-Prot : SWS_FT_FI1

22) chain B
residue 150
type BINDING
sequence S
description BINDING => ECO:0000269|PubMed:15602554, ECO:0000269|PubMed:15864302, ECO:0000269|PubMed:19965479, ECO:0000269|PubMed:9533885, ECO:0000269|PubMed:9878368, ECO:0007744|PDB:1BYU, ECO:0007744|PDB:1WA5, ECO:0007744|PDB:2BKU, ECO:0007744|PDB:3A6P, ECO:0007744|PDB:3RAN, ECO:0007744|PDB:3W3Z, ECO:0007744|PDB:5BXQ
source Swiss-Prot : SWS_FT_FI1

23) chain B
residue 152
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0000250|UniProtKB:P62826
source Swiss-Prot : SWS_FT_FI11

24) chain B
residue 37
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P62826
source Swiss-Prot : SWS_FT_FI7

25) chain B
residue 60
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P62826
source Swiss-Prot : SWS_FT_FI7

26) chain B
residue 99
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P62826
source Swiss-Prot : SWS_FT_FI7

27) chain B
residue 134
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P62826
source Swiss-Prot : SWS_FT_FI7

28) chain B
residue 71
type MOD_RES
sequence K
description N6-acetyllysine; alternate => ECO:0000250|UniProtKB:P62826
source Swiss-Prot : SWS_FT_FI8


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