eF-site ID 1bya-A
PDB Code 1bya
Chain A

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Title CRYSTAL STRUCTURES OF SOYBEAN BETA-AMYLASE REACTED WITH BETA-MALTOSE AND MALTAL: ACTIVE SITE COMPONENTS AND THEIR APPARENT ROLE IN CATALYSIS
Classification HYDROLASE(O-GLYCOSYL)
Compound BETA-AMYLASE
Source (AMYB_SOYBN)
Sequence A:  SNMLLNYVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRA
AGVDGVMVDVWWGIIELKGPKQYDWRAYRSLFQLVQECGL
TLQAIMSFHQCGGNVGDIVNIPIPQWVLDIGESNHDIFYT
NRSGTRNKEYLTVGVDNEPIFHGRTAIEIYSDYMKSFREN
MSDFLESGLIIDIEVGLGPAGELRYPSYPQSQGWEFPRIG
EFQCYDKYLKADFKAAVARAGHPEWELPDDAGKYNDVPES
TGFFKSNGTYVTEKGKFFLTWYSNKLLNHGDQILDEANKA
FLGCKVKLAIKVSGIHWWYKVENHAAELTAGYYNLNDRDG
YRPIARMLSRHHAILNFTCLEMRDSEQPSDAKSGPQELVQ
QVLSGGWREDIRVAGENALPRYDATAYNQIILNAKPQGVN
NNGPPKLSMFGVTYLRLSDDLLQKSNFNIFKKFVLKMHAD
QDYCANPQKYNHAITPLKPSAPKIPIEVLLEATKPTLPFP
WLPETDMKVDG
Description


Functional site

1) chain A
residue 146
type
sequence H
description BINDING SITE FOR RESIDUE SO4 A 951
source : AC1

2) chain A
residue 326
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 951
source : AC1

3) chain A
residue 372
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 951
source : AC1

4) chain A
residue 102
type catalytic
sequence I
description 436
source MCSA : MCSA1

5) chain A
residue 187
type catalytic
sequence L
description 436
source MCSA : MCSA1

6) chain A
residue 343
type catalytic
sequence C
description 436
source MCSA : MCSA1

7) chain A
residue 381
type catalytic
sequence N
description 436
source MCSA : MCSA1

8) chain A
residue 384
type catalytic
sequence P
description 436
source MCSA : MCSA1

9) chain A
residue 187
type ACT_SITE
sequence L
description Proton donor => ECO:0000255|PROSITE-ProRule:PRU10050, ECO:0000269|PubMed:15178253, ECO:0000269|PubMed:2474529, ECO:0000269|PubMed:8011643, ECO:0000269|PubMed:8174545
source Swiss-Prot : SWS_FT_FI1

10) chain A
residue 381
type ACT_SITE
sequence N
description Proton acceptor => ECO:0000269|PubMed:15178253, ECO:0000269|PubMed:8011643
source Swiss-Prot : SWS_FT_FI2

11) chain A
residue 54
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:15178253
source Swiss-Prot : SWS_FT_FI3

12) chain A
residue 94
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:15178253
source Swiss-Prot : SWS_FT_FI3

13) chain A
residue 102
type BINDING
sequence I
description BINDING => ECO:0000269|PubMed:15178253
source Swiss-Prot : SWS_FT_FI3

14) chain A
residue 296
type BINDING
sequence V
description BINDING => ECO:0000269|PubMed:15178253
source Swiss-Prot : SWS_FT_FI3

15) chain A
residue 301
type BINDING
sequence W
description BINDING => ECO:0000269|PubMed:15178253
source Swiss-Prot : SWS_FT_FI3

16) chain A
residue 343
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:15178253
source Swiss-Prot : SWS_FT_FI3

17) chain A
residue 382
type BINDING
sequence A
description BINDING => ECO:0000269|PubMed:15178253
source Swiss-Prot : SWS_FT_FI3

18) chain A
residue 421
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:15178253
source Swiss-Prot : SWS_FT_FI3

19) chain A
residue 93-101
type prosite
sequence HQCGGNVGD
description BETA_AMYLASE_1 Beta-amylase active site 1. HqCGGNVGD
source prosite : PS00506

20) chain A
residue 182-192
type prosite
sequence GPAGELRYPSY
description BETA_AMYLASE_2 Beta-amylase active site 2. GpAGELRYPSY
source prosite : PS00679


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