eF-site ID 1bmf-D
PDB Code 1bmf
Chain D

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Title BOVINE MITOCHONDRIAL F1-ATPASE
Classification ATP PHOSPHORYLASE
Compound BOVINE MITOCHONDRIAL F1-ATPASE
Source ORGANISM_COMMON: cattle; ORGANISM_SCIENTIFIC: Bos taurus;
Sequence D:  TTGRIVAVIGAVVDVQFDEGLPPILNALEVQGRETRLVLE
VAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIRIPVGP
ETLGRIMNVIGEPIDERGPIKTKQFAAIHAEAPEFVEMSV
EQEILVTGIKVVDLLAPYAKGGKIGLFGGAGVGKTVLIME
LINNVAKAHGGYSVFAGVGERTREGNDLYHEMIESGVINL
KDATSKVALVYGQMNEPPGARARVALTGLTVAEYFRDQEG
QDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATD
MGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAH
LDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIVGSEHY
DVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRAR
KIQRFLSQPFQVAEVFTGHLGKLVPLKETIKGFQQILAGE
YDHLPEQAFYMVGPIEEAVAKADKLAE
Description


Functional site

1) chain D
residue 162
type
sequence K
description LYSINE WITHIN THE P-LOOP (PHOSPHATE BINDING) MOTIF, GXXXXGKT/S.
source : PLP

2) chain D
residue 188
type
sequence E
description THE CARBOXYLATE GROUP OF THE GLUTAMIC ACID RESIDUE IS BELIEVED TO ACTIVATE A WATER MOLECULE FOR INLINE ATTACK ON THE GAMMA PHOSPHATE DURING ATP HYDROLYSIS. THE ARGININE RESIDUE (WHICH IS LOCATED ON AN ADJACENT ALPHA SUBUNIT) COULD HELP TO STABLIZE THE NEGATIVE CHARGE THAT DEVELOPS ON THE TERMINAL PHOSPHATE IN THE PUTATIVE PENTACOORDINATED TRANSITION STATE.
source : CAT

3) chain D
residue 163
type
sequence T
description BINDING SITE FOR RESIDUE MG D 601
source : AC4

4) chain D
residue 159
type
sequence G
description BINDING SITE FOR RESIDUE ADP D 600
source : AC9

5) chain D
residue 160
type
sequence V
description BINDING SITE FOR RESIDUE ADP D 600
source : AC9

6) chain D
residue 161
type
sequence G
description BINDING SITE FOR RESIDUE ADP D 600
source : AC9

7) chain D
residue 162
type
sequence K
description BINDING SITE FOR RESIDUE ADP D 600
source : AC9

8) chain D
residue 163
type
sequence T
description BINDING SITE FOR RESIDUE ADP D 600
source : AC9

9) chain D
residue 164
type
sequence V
description BINDING SITE FOR RESIDUE ADP D 600
source : AC9

10) chain D
residue 345
type
sequence Y
description BINDING SITE FOR RESIDUE ADP D 600
source : AC9

11) chain D
residue 418
type
sequence F
description BINDING SITE FOR RESIDUE ADP D 600
source : AC9

12) chain D
residue 424
type
sequence F
description BINDING SITE FOR RESIDUE ADP D 600
source : AC9

13) chain D
residue 425
type
sequence T
description BINDING SITE FOR RESIDUE ADP D 600
source : AC9

14) chain D
residue 162
type catalytic
sequence K
description 178
source MCSA : MCSA1

15) chain D
residue 188
type catalytic
sequence E
description 178
source MCSA : MCSA1

16) chain D
residue 189
type catalytic
sequence R
description 178
source MCSA : MCSA1

17) chain D
residue 209
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P36542
source Swiss-Prot : SWS_FT_FI3

18) chain D
residue 214
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P36542
source Swiss-Prot : SWS_FT_FI3

19) chain D
residue 472
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P36542
source Swiss-Prot : SWS_FT_FI3

20) chain D
residue 365
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P06576
source Swiss-Prot : SWS_FT_FI6

21) chain D
residue 383
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P10719
source Swiss-Prot : SWS_FT_FI7

22) chain D
residue 430
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P56480
source Swiss-Prot : SWS_FT_FI8

23) chain D
residue 435
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0000250|UniProtKB:P56480
source Swiss-Prot : SWS_FT_FI8

24) chain D
residue 56
type CARBOHYD
sequence S
description O-linked (GlcNAc) serine => ECO:0000250
source Swiss-Prot : SWS_FT_FI9

25) chain D
residue 346-355
type prosite
sequence PAVDPLDSTS
description ATPASE_ALPHA_BETA ATP synthase alpha and beta subunits signature. PAINVGLSVS
source prosite : PS00152


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