eF-site ID 1blf-A
PDB Code 1blf
Chain A

click to enlarge
Title STRUCTURE OF DIFERRIC BOVINE LACTOFERRIN AT 2.8 ANGSTROMS RESOLUTION
Classification IRON-BINDING PROTEIN
Compound LACTOFERRIN
Source ORGANISM_COMMON: cattle; ORGANISM_SCIENTIFIC: Bos taurus;
Sequence A:  NVRWCTISQPEWFKCRRWQWRMKKLGAPSITCVRRAFALE
CIRAIAEKKADAVTLDGGMVFEAGRDPYKLRPVAAEIYGT
KESPQTHYYAVAVVKKGSNFQLDQLQGRKSCHTGLGRSAG
WIIPMGILRPYLSWTESLEPLQGAVAKFFSASCVPCIDRQ
AYPNLCQLCKGEGENQCACSSREPYFGYSGAFKCLQDGAG
DVAFVKETTVFENLPEKADRDQYELLCLNNSRAPVDAFKE
CHLAQVPSHAVVARSVDGKEDLIWKLLSKAQEKFGKNKSR
SFQLFGSPPGQRDLLFKDSALGFLRIPSKVDSALYLGSRY
LTTLKNLRETAEEVKARYTRVVWCAVGPEEQKKCQQWSQQ
SGQNVTCATASTTDDCIVLVLKGEADALNLDGGYIYTAGK
CGLVPVLAENRKSSKHSSLDCVLRPTEGYLAVAVVKKANE
GLTWNSLKDKKSCHTAVDRTAGWNIPMGLIVNQTGSCAFD
EFFSQSCAPGADPKSRLCALCAGDDQGLDKCVPNSKEKYY
GYTGAFRCLAEDVGDVAFVKNDTVWENTNGESTADWAKNL
NREDFRLLCLDGTRKPVTEAQSCHLAVAPNHAVVSRSDRA
AHVKQVLLHQQALFGKNGKNCPDKFCLFKSETKNLLFNDN
TECLAKLGGRPTYEEYLGTEYVTAIANLKKCSTSPLLEAC
AFLTR
Description


Functional site

1) chain A
residue 60
type
sequence D
description FE+3 BINDING SITE.
source : FE1

2) chain A
residue 92
type
sequence Y
description FE+3 BINDING SITE.
source : FE1

3) chain A
residue 192
type
sequence Y
description FE+3 BINDING SITE.
source : FE1

4) chain A
residue 253
type
sequence H
description FE+3 BINDING SITE.
source : FE1

5) chain A
residue 395
type
sequence D
description FE+3 BINDING SITE.
source : FE2

6) chain A
residue 433
type
sequence Y
description FE+3 BINDING SITE.
source : FE2

7) chain A
residue 526
type
sequence Y
description FE+3 BINDING SITE.
source : FE2

8) chain A
residue 595
type
sequence H
description FE+3 BINDING SITE.
source : FE2

9) chain A
residue 92-101
type prosite
sequence YYAVAVVKKG
description TRANSFERRIN_LIKE_1 Transferrin-like domain signature 1. YyAVAVVKKG
source prosite : PS00205

10) chain A
residue 433-442
type prosite
sequence YLAVAVVKKA
description TRANSFERRIN_LIKE_1 Transferrin-like domain signature 1. YyAVAVVKKG
source prosite : PS00205

11) chain A
residue 192-208
type prosite
sequence YSGAFKCLQDGAGDVAF
description TRANSFERRIN_LIKE_2 Transferrin-like domain signature 2. YsGAFKCLqdgaGDVAF
source prosite : PS00206

12) chain A
residue 526-542
type prosite
sequence YTGAFRCLAEDVGDVAF
description TRANSFERRIN_LIKE_2 Transferrin-like domain signature 2. YsGAFKCLqdgaGDVAF
source prosite : PS00206

13) chain A
residue 226-256
type prosite
sequence QYELLCLNNSRAPVDAFKECHLAQVPSHAVV
description TRANSFERRIN_LIKE_3 Transferrin-like domain signature 3. QYeLLClNnsrap...VdafkeChlAqvpsHaVV
source prosite : PS00207

14) chain A
residue 568-598
type prosite
sequence DFRLLCLDGTRKPVTEAQSCHLAVAPNHAVV
description TRANSFERRIN_LIKE_3 Transferrin-like domain signature 3. QYeLLClNnsrap...VdafkeChlAqvpsHaVV
source prosite : PS00207

15) chain A
residue 73
type ACT_SITE
sequence K
description ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU00741
source Swiss-Prot : SWS_FT_FI1

16) chain A
residue 259
type ACT_SITE
sequence S
description Nucleophile => ECO:0000255|PROSITE-ProRule:PRU00741
source Swiss-Prot : SWS_FT_FI2

17) chain A
residue 60
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741, ECO:0000269|PubMed:9398529, ECO:0007744|PDB:1BLF
source Swiss-Prot : SWS_FT_FI3

18) chain A
residue 92
type BINDING
sequence Y
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741, ECO:0000269|PubMed:9398529, ECO:0007744|PDB:1BLF
source Swiss-Prot : SWS_FT_FI3

19) chain A
residue 192
type BINDING
sequence Y
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741, ECO:0000269|PubMed:9398529, ECO:0007744|PDB:1BLF
source Swiss-Prot : SWS_FT_FI3

20) chain A
residue 253
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741, ECO:0000269|PubMed:9398529, ECO:0007744|PDB:1BLF
source Swiss-Prot : SWS_FT_FI3

21) chain A
residue 395
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741, ECO:0000269|PubMed:9398529, ECO:0007744|PDB:1BLF
source Swiss-Prot : SWS_FT_FI3

22) chain A
residue 433
type BINDING
sequence Y
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741, ECO:0000269|PubMed:9398529, ECO:0007744|PDB:1BLF
source Swiss-Prot : SWS_FT_FI3

23) chain A
residue 526
type BINDING
sequence Y
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741, ECO:0000269|PubMed:9398529, ECO:0007744|PDB:1BLF
source Swiss-Prot : SWS_FT_FI3

24) chain A
residue 595
type BINDING
sequence H
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741, ECO:0000269|PubMed:9398529, ECO:0007744|PDB:1BLF
source Swiss-Prot : SWS_FT_FI3

25) chain A
residue 117
type BINDING
sequence T
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741
source Swiss-Prot : SWS_FT_FI4

26) chain A
residue 121
type BINDING
sequence R
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741
source Swiss-Prot : SWS_FT_FI4

27) chain A
residue 123
type BINDING
sequence A
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741
source Swiss-Prot : SWS_FT_FI4

28) chain A
residue 124
type BINDING
sequence G
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741
source Swiss-Prot : SWS_FT_FI4

29) chain A
residue 459
type BINDING
sequence T
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741
source Swiss-Prot : SWS_FT_FI4

30) chain A
residue 463
type BINDING
sequence R
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741
source Swiss-Prot : SWS_FT_FI4

31) chain A
residue 465
type BINDING
sequence A
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741
source Swiss-Prot : SWS_FT_FI4

32) chain A
residue 466
type BINDING
sequence G
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00741
source Swiss-Prot : SWS_FT_FI4

33) chain A
residue 233
type CARBOHYD
sequence N
description N-linked (GlcNAc...) (high mannose) asparagine => ECO:0000255|PROSITE-ProRule:PRU00498, ECO:0000269|DOI:10.1016/j.idairyj.2021.104999
source Swiss-Prot : SWS_FT_FI5

34) chain A
residue 281
type CARBOHYD
sequence N
description N-linked (GlcNAc...) (complex) asparagine => ECO:0000255|PROSITE-ProRule:PRU00498, ECO:0000269|DOI:10.1016/j.idairyj.2021.104999
source Swiss-Prot : SWS_FT_FI6

35) chain A
residue 368
type CARBOHYD
sequence N
description N-linked (GlcNAc...) (hybrid) asparagine; alternate => ECO:0000255|PROSITE-ProRule:PRU00498, ECO:0000269|PubMed:9398529, ECO:0000269|DOI:10.1016/j.idairyj.2021.104999, ECO:0007744|PDB:1BLF
source Swiss-Prot : SWS_FT_FI7

36) chain A
residue 476
type CARBOHYD
sequence N
description N-linked (GlcNAc...) (hybrid) asparagine; alternate => ECO:0000255|PROSITE-ProRule:PRU00498, ECO:0000269|PubMed:9398529, ECO:0000269|DOI:10.1016/j.idairyj.2021.104999, ECO:0007744|PDB:1BLF
source Swiss-Prot : SWS_FT_FI7

37) chain A
residue 545
type CARBOHYD
sequence N
description N-linked (GlcNAc...) (high mannose) asparagine => ECO:0000255|PROSITE-ProRule:PRU00498, ECO:0000269|PubMed:9398529, ECO:0000269|DOI:10.1016/j.idairyj.2021.104999, ECO:0007744|PDB:1BLF
source Swiss-Prot : SWS_FT_FI8


Display surface

Download
Links