eF-site ID 1avq-ABC
PDB Code 1avq
Chain A, B, C

click to enlarge
Title TOROIDAL STRUCTURE OF LAMBDA EXONUCLEASE DETERMINED AT 2.4 ANGSTROMS
Classification DEOXYRIBONUCLEASE
Compound LAMBDA EXONUCLEASE
Source (EXO_LAMBD)
Sequence A:  SHMTPDIILQRTGIDVRAVEQGDDAWHKLRLGVITASEVH
NVIAKPRSGKKWPDMKMSYFHTLLAEVCTGVAPEVNAKAL
AWGKQYENDARTLFEFTSGVNVTESPIIYRDESMRTACSP
DGLCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQV
QYSMWVTRKNAWYFANYDPRMKREGLHYVVIERDEKYMAS
FDEIVPEFIEKMDEALAEIGFVFGEQWR
B:  SHMTPDIILQRTGIDVRAVEQGDDAWHKLRLGVITASEVH
NVIAKPRSGKKWPDMKMSYFHTLLAEVCTGVAPEVNAKAL
AWGKQYENDARTLFEFTSGVNVTESPIIYRDESMRTACSP
DGLCSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQV
QYSMWVTRKNAWYFANYDPRMKREGLHYVVIERDEKYMAS
FDEIVPEFIEKMDEALAEIGFVFGEQWR
C:  TPDIILQRTGIDVRAVEQGDDAWHKLRLGVITASEVHNVI
AKPRSGKKWPDMKMSYFHTLLAEVCTGVAPEVNAKALAWG
KQYENDARTLFEFTSGVNVTESPIIYRDESMRTACSPDGL
CSDGNGLELKCPFTSRDFMKFRLGGFEAIKSAYMAQVQYS
MWVTRKNAWYFANYDPRMKREGLHYVVIERDEKYMASFDE
IVPEFIEKMDEALAEIGFVFGEQWR
Description


Functional site

1) chain A
residue 28
type
sequence R
description BINDING SITE FOR RESIDUE PO4 A 227
source : AC1

2) chain A
residue 33
type
sequence T
description BINDING SITE FOR RESIDUE PO4 A 227
source : AC1

3) chain A
residue 34
type
sequence A
description BINDING SITE FOR RESIDUE PO4 A 227
source : AC1

4) chain A
residue 35
type
sequence S
description BINDING SITE FOR RESIDUE PO4 A 227
source : AC1

5) chain A
residue 116
type
sequence C
description BINDING SITE FOR RESIDUE PO4 A 227
source : AC1

6) chain A
residue 117
type
sequence S
description BINDING SITE FOR RESIDUE PO4 A 227
source : AC1

7) chain A
residue 157
type
sequence Q
description BINDING SITE FOR RESIDUE PO4 A 227
source : AC1

8) chain B
residue 28
type
sequence R
description BINDING SITE FOR RESIDUE PO4 B 227
source : AC2

9) chain B
residue 33
type
sequence T
description BINDING SITE FOR RESIDUE PO4 B 227
source : AC2

10) chain B
residue 34
type
sequence A
description BINDING SITE FOR RESIDUE PO4 B 227
source : AC2

11) chain B
residue 35
type
sequence S
description BINDING SITE FOR RESIDUE PO4 B 227
source : AC2

12) chain B
residue 116
type
sequence C
description BINDING SITE FOR RESIDUE PO4 B 227
source : AC2

13) chain B
residue 117
type
sequence S
description BINDING SITE FOR RESIDUE PO4 B 227
source : AC2

14) chain B
residue 157
type
sequence Q
description BINDING SITE FOR RESIDUE PO4 B 227
source : AC2

15) chain C
residue 28
type
sequence R
description BINDING SITE FOR RESIDUE PO4 C 227
source : AC3

16) chain C
residue 33
type
sequence T
description BINDING SITE FOR RESIDUE PO4 C 227
source : AC3

17) chain C
residue 34
type
sequence A
description BINDING SITE FOR RESIDUE PO4 C 227
source : AC3

18) chain C
residue 35
type
sequence S
description BINDING SITE FOR RESIDUE PO4 C 227
source : AC3

19) chain C
residue 116
type
sequence C
description BINDING SITE FOR RESIDUE PO4 C 227
source : AC3

20) chain C
residue 117
type
sequence S
description BINDING SITE FOR RESIDUE PO4 C 227
source : AC3

21) chain A
residue 198
type
sequence S
description BINDING SITE FOR RESIDUE ACT A 228
source : AC4

22) chain B
residue 198
type
sequence S
description BINDING SITE FOR RESIDUE ACT B 228
source : AC5

23) chain C
residue 194
type
sequence K
description BINDING SITE FOR RESIDUE ACT C 228
source : AC6

24) chain C
residue 195
type
sequence Y
description BINDING SITE FOR RESIDUE ACT C 228
source : AC6

25) chain C
residue 198
type
sequence S
description BINDING SITE FOR RESIDUE ACT C 228
source : AC6

26) chain C
residue 2
type
sequence T
description BINDING SITE FOR RESIDUE ACT C 229
source : AC7

27) chain C
residue 5
type
sequence I
description BINDING SITE FOR RESIDUE ACT C 229
source : AC7

28) chain C
residue 6
type
sequence I
description BINDING SITE FOR RESIDUE ACT C 229
source : AC7

29) chain C
residue 109
type
sequence D
description BINDING SITE FOR RESIDUE ACT C 229
source : AC7

30) chain C
residue 110
type
sequence E
description BINDING SITE FOR RESIDUE ACT C 229
source : AC7

31) chain A
residue 93
type catalytic
sequence E
description 836
source MCSA : MCSA1

32) chain A
residue 102
type catalytic
sequence E
description 836
source MCSA : MCSA1

33) chain A
residue 109
type catalytic
sequence D
description 836
source MCSA : MCSA1

34) chain A
residue 129
type catalytic
sequence E
description 836
source MCSA : MCSA1

35) chain A
residue 130
type catalytic
sequence L
description 836
source MCSA : MCSA1

36) chain A
residue 131
type catalytic
sequence K
description 836
source MCSA : MCSA1

37) chain B
residue 93
type catalytic
sequence E
description 836
source MCSA : MCSA2

38) chain B
residue 102
type catalytic
sequence E
description 836
source MCSA : MCSA2

39) chain B
residue 109
type catalytic
sequence D
description 836
source MCSA : MCSA2

40) chain B
residue 129
type catalytic
sequence E
description 836
source MCSA : MCSA2

41) chain B
residue 130
type catalytic
sequence L
description 836
source MCSA : MCSA2

42) chain B
residue 131
type catalytic
sequence K
description 836
source MCSA : MCSA2

43) chain C
residue 93
type catalytic
sequence E
description 836
source MCSA : MCSA3

44) chain C
residue 102
type catalytic
sequence E
description 836
source MCSA : MCSA3

45) chain C
residue 109
type catalytic
sequence D
description 836
source MCSA : MCSA3

46) chain C
residue 129
type catalytic
sequence E
description 836
source MCSA : MCSA3

47) chain C
residue 130
type catalytic
sequence L
description 836
source MCSA : MCSA3

48) chain C
residue 131
type catalytic
sequence K
description 836
source MCSA : MCSA3

49) chain A
residue 119
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

50) chain A
residue 129
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

51) chain B
residue 119
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

52) chain B
residue 129
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

53) chain C
residue 119
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1

54) chain C
residue 129
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1


Display surface

Download
Links