|
|
eF-site ID
|
1aoi-D |
|
PDB Code
|
1aoi |
|
Chain
|
D |
|
click to enlarge
|
|
|
Title
|
COMPLEX BETWEEN NUCLEOSOME CORE PARTICLE (H3,H4,H2A,H2B) AND 146 BP LONG DNA FRAGMENT |
|
Classification
|
DNA BINDING PROTEIN/DNA |
|
Compound
|
PALINDROMIC 146 BP DNA REPEAT 8/9 FROM HUMAN X-CHROMOSOME ALPHA SATELLITE DNA |
|
Source
|
Xenopus laevis (African clawed frog) (1AOI) |
|
|
Sequence
|
D: |
KKRRKTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFV
NDVFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGEL
AKHAVSEGTKAVTKYTSAK
|
|
|
Description
|
|
Functional site
|
|
|
1)
|
chain |
D |
| residue |
110 |
| type |
CARBOHYD |
| sequence |
E
|
| description |
O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
2)
|
chain |
D |
| residue |
118 |
| type |
CROSSLNK |
| sequence |
Y
|
| description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0C1H4
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
3)
|
chain |
D |
| residue |
89-111 |
| type |
prosite |
| sequence |
REIQTAVRLLLPGELAKHAVSEG
|
| description |
HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG
|
| source |
prosite : PS00357
|
|
|
|