eF-site ID 1aoi-C
PDB Code 1aoi
Chain C

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Title COMPLEX BETWEEN NUCLEOSOME CORE PARTICLE (H3,H4,H2A,H2B) AND 146 BP LONG DNA FRAGMENT
Classification DNA BINDING PROTEIN/DNA
Compound PALINDROMIC 146 BP DNA REPEAT 8/9 FROM HUMAN X-CHROMOSOME ALPHA SATELLITE DNA
Source Xenopus laevis (African clawed frog) (1AOI)
Sequence C:  GKQGGKTRAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERV
GAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHL
QLAVRNDEELNKLLGRVTIAQGGVLPNIQSVLLPK
Description


Functional site

1) chain C
residue 96
type CROSSLNK
sequence L
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0C1H4
source Swiss-Prot : SWS_FT_FI2

2) chain C
residue 105
type MOD_RES
sequence G
description N5-methylglutamine => ECO:0000250
source Swiss-Prot : SWS_FT_FI5

3) chain C
residue 14
type CROSSLNK
sequence A
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250
source Swiss-Prot : SWS_FT_FI7

4) chain C
residue 16
type CROSSLNK
sequence T
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250
source Swiss-Prot : SWS_FT_FI7

5) chain C
residue 21-27
type prosite
sequence AGLQFPV
description HISTONE_H2A Histone H2A signature. AGLqFPV
source prosite : PS00046

6) chain C
residue 37
type MOD_RES
sequence G
description N6-(2-hydroxyisobutyryl)lysine; alternate => ECO:0000250|UniProtKB:P0C0S8
source Swiss-Prot : SWS_FT_FI3

7) chain C
residue 75
type MOD_RES
sequence K
description N6-(2-hydroxyisobutyryl)lysine => ECO:0000250|UniProtKB:P0C0S8
source Swiss-Prot : SWS_FT_FI4

8) chain C
residue 76
type MOD_RES
sequence T
description N6-(2-hydroxyisobutyryl)lysine => ECO:0000250|UniProtKB:P0C0S8
source Swiss-Prot : SWS_FT_FI4


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