eF-site ID 1a5v-A
PDB Code 1a5v
Chain A

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Title ASV INTEGRASE CORE DOMAIN WITH HIV-1 INTEGRASE INHIBITOR Y3 AND MN CATION
Classification HYDROLASE
Compound INTEGRASE
Source Rous sarcoma virus (strain Prague C) (RSV-PrC) (POL_RSVP)
Sequence A:  GLGPLQIWQTDFTLEPRMAPRSWLAVTVDTASSAIVVTQH
GRVTSVAAQHHWATAIAVLGRPKAIKTDNGSCFTSKSTRE
WLARWGIAHTTGIPGNSQGQAMVERANRLLKDKIRVLAEG
DGFMKRIPTSKQGELLAKAMYALNHF
Description


Functional site

1) chain A
residue 64
type
sequence D
description ACTIVE SITE.
source : ACT

2) chain A
residue 121
type
sequence D
description ACTIVE SITE.
source : ACT

3) chain A
residue 157
type
sequence E
description ACTIVE SITE.
source : ACT

4) chain A
residue 64
type
sequence D
description BINDING SITE FOR RESIDUE MN A 2
source : AC1

5) chain A
residue 121
type
sequence D
description BINDING SITE FOR RESIDUE MN A 2
source : AC1

6) chain A
residue 62
type
sequence Q
description BINDING SITE FOR RESIDUE Y3 A 1
source : AC2

7) chain A
residue 119
type
sequence K
description BINDING SITE FOR RESIDUE Y3 A 1
source : AC2

8) chain A
residue 119
type
sequence K
description BINDING SITE FOR RESIDUE Y3 A 1
source : AC2

9) chain A
residue 145
type
sequence G
description BINDING SITE FOR RESIDUE Y3 A 1
source : AC2

10) chain A
residue 146
type
sequence I
description BINDING SITE FOR RESIDUE Y3 A 1
source : AC2

11) chain A
residue 154
type
sequence A
description BINDING SITE FOR RESIDUE Y3 A 1
source : AC2

12) chain A
residue 155
type
sequence M
description BINDING SITE FOR RESIDUE Y3 A 1
source : AC2

13) chain A
residue 136
type SITE
sequence A
description Cleavage; by viral protease p15 => ECO:0000303|PubMed:15102858
source Swiss-Prot : SWS_FT_FI1

14) chain A
residue 64
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00457, ECO:0000269|PubMed:8805516, ECO:0000269|PubMed:9218451
source Swiss-Prot : SWS_FT_FI2

15) chain A
residue 121
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00457, ECO:0000269|PubMed:8805516, ECO:0000269|PubMed:9218451
source Swiss-Prot : SWS_FT_FI2

16) chain A
residue 157
type BINDING
sequence E
description BINDING => ECO:0000250|UniProtKB:P03354, ECO:0000269|PubMed:8805516, ECO:0000269|PubMed:9218451
source Swiss-Prot : SWS_FT_FI3


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