eF-site ID 1a0i-A
PDB Code 1a0i
Chain A

click to enlarge
Title ATP-DEPENDENT DNA LIGASE FROM BACTERIOPHAGE T7 COMPLEX WITH ATP
Classification LIGASE
Compound DNA LIGASE
Source null (DNLI_BPT7)
Sequence A:  VNIKTNPFKAVSFVESAIKKALDNAGYLIAEIKYDGVRGN
ICVDNTANSYWLSRVSKTIPALEHLNGFDVRWKRLLNDDR
CFYKDGFMLDGELMVKGVDFNTGSGLLRTKWTDTKNQEFH
RKKDKVPFKLHTGHLHIKLYAILPLHIVESGEDCDVMTLL
MQEHVKNMLPLLQEYFPEIEWQAAESYEVYDMVELQQLYE
QKRAEGHEGLIVKDPMCIYKRGKKSGWWKMKPENEADGII
QGLVWGTKGLANEGKVIGFEVLLESGRLVNATNISRALMD
EFTETVKEATLSQWGFFDACTINPYDGWACQISYMEETPD
GSLRHPSFVMFR
Description


Functional site

1) chain A
residue 32
type
sequence E
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

2) chain A
residue 33
type
sequence I
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

3) chain A
residue 34
type
sequence K
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

4) chain A
residue 35
type
sequence Y
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

5) chain A
residue 39
type
sequence R
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

6) chain A
residue 55
type
sequence R
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

7) chain A
residue 93
type
sequence E
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

8) chain A
residue 149
type
sequence Y
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

9) chain A
residue 220
type
sequence I
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

10) chain A
residue 222
type
sequence K
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

11) chain A
residue 232
type
sequence K
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

12) chain A
residue 236
type
sequence W
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

13) chain A
residue 238
type
sequence K
description BINDING SITE FOR RESIDUE ATP A 1
source : AC1

14) chain A
residue 34
type catalytic
sequence K
description 202
source MCSA : MCSA1

15) chain A
residue 238
type catalytic
sequence K
description 202
source MCSA : MCSA1

16) chain A
residue 240
type catalytic
sequence K
description 202
source MCSA : MCSA1

17) chain A
residue 34
type ACT_SITE
sequence K
description N6-AMP-lysine intermediate => ECO:0000255|PROSITE-ProRule:PRU10135
source Swiss-Prot : SWS_FT_FI1

18) chain A
residue 32
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:8653795
source Swiss-Prot : SWS_FT_FI2

19) chain A
residue 39
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:8653795
source Swiss-Prot : SWS_FT_FI2

20) chain A
residue 55
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:8653795
source Swiss-Prot : SWS_FT_FI2

21) chain A
residue 93
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:8653795
source Swiss-Prot : SWS_FT_FI2

22) chain A
residue 232
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:8653795
source Swiss-Prot : SWS_FT_FI2

23) chain A
residue 217
type BINDING
sequence E
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

24) chain A
residue 217-240
type prosite
sequence EGLIVKDPMCIYKRGKKSGWWKMK
description DNA_LIGASE_A2 ATP-dependent DNA ligase signature 2. EGLIVKdpmci...YKrgk...Ksgww.KMK
source prosite : PS00333

25) chain A
residue 32-40
type prosite
sequence EIKYDGVRG
description DNA_LIGASE_A1 ATP-dependent DNA ligase AMP-binding site. EIKYDGVRG
source prosite : PS00697

26) chain A
residue 238
type BINDING
sequence K
description BINDING => ECO:0000305|PubMed:8653795
source Swiss-Prot : SWS_FT_FI4


Display surface

Download
Links