eF-site ID 117e-A
PDB Code 117e
Chain A

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Title THE R78K AND D117E ACTIVE SITE VARIANTS OF SACCHAROMYCES CEREVISIAE SOLUBLE INORGANIC PYROPHOSPHATASE: STRUCTURAL STUDIES AND MECHANISTIC IMPLICATIONS
Classification HYDROLASE
Compound PROTEIN (INORGANIC PYROPHOSPHATASE)
Source Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (IPYR_YEAST)
Sequence A:  TYTTRQIGAKNTLEYKVYIEKDGKPVSAFHDIPLYADKEN
NIFNMVVEIPRWTNAKLEITKEETLNPIIQDTKKGKLRFV
RNCFPHHGYIHNYGAFPQTWEDPNVSHPETKAVGDNEPID
VLEIGETIAYTGQVKQVKALGIMALLDEGETDWKVIAIDI
NDPLAPKLNDIEDVEKYFPGLLRATNEWFRIYKIPDGKPE
NQFAFSGEAKNKKYALDIIKETHDSWKQLIAGKSSDSKGI
DLTNVTLPDTPTYSKAASDAIPPASLKADAPIDKSIDKWF
FI
Description


Functional site

1) chain A
residue 117
type
sequence E
description
source : MN1

2) chain A
residue 152
type
sequence D
description
source : MN1

3) chain A
residue 115
type
sequence D
description
source : MN1

4) chain A
residue 120
type
sequence D
description
source : MN1

5) chain A
residue 117
type
sequence E
description
source : MN2

6) chain A
residue 93
type
sequence Y
description
source : MN2

7) chain A
residue 120
type
sequence D
description
source : MN2

8) chain A
residue 152
type
sequence D
description
source : MN4

9) chain A
residue 147
type
sequence D
description
source : MN4

10) chain A
residue 115
type
sequence D
description BINDING SITE FOR RESIDUE MN A 2001
source : AC1

11) chain A
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MN A 2001
source : AC1

12) chain A
residue 120
type
sequence D
description BINDING SITE FOR RESIDUE MN A 2001
source : AC1

13) chain A
residue 152
type
sequence D
description BINDING SITE FOR RESIDUE MN A 2001
source : AC1

14) chain A
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE MN A 2002
source : AC2

15) chain A
residue 120
type
sequence D
description BINDING SITE FOR RESIDUE MN A 2002
source : AC2

16) chain A
residue 147
type
sequence D
description BINDING SITE FOR RESIDUE MN A 2004
source : AC4

17) chain A
residue 152
type
sequence D
description BINDING SITE FOR RESIDUE MN A 2004
source : AC4

18) chain A
residue 56
type
sequence K
description BINDING SITE FOR RESIDUE PO4 A 3001
source : AC9

19) chain A
residue 78
type
sequence R
description BINDING SITE FOR RESIDUE PO4 A 3001
source : AC9

20) chain A
residue 147
type
sequence D
description BINDING SITE FOR RESIDUE PO4 A 3001
source : AC9

21) chain A
residue 192
type
sequence Y
description BINDING SITE FOR RESIDUE PO4 A 3001
source : AC9

22) chain A
residue 193
type
sequence K
description BINDING SITE FOR RESIDUE PO4 A 3001
source : AC9

23) chain A
residue 56
type
sequence K
description BINDING SITE FOR RESIDUE PO4 A 3002
source : BC1

24) chain A
residue 93
type
sequence Y
description BINDING SITE FOR RESIDUE PO4 A 3002
source : BC1

25) chain A
residue 115
type
sequence D
description BINDING SITE FOR RESIDUE PO4 A 3002
source : BC1

26) chain A
residue 117
type
sequence E
description BINDING SITE FOR RESIDUE PO4 A 3002
source : BC1

27) chain A
residue 120
type
sequence D
description BINDING SITE FOR RESIDUE PO4 A 3002
source : BC1

28) chain A
residue 152
type
sequence D
description BINDING SITE FOR RESIDUE PO4 A 3002
source : BC1

29) chain A
residue 90
type ACT_SITE
sequence I
description Proton donor => ECO:0000269|PubMed:1322842
source Swiss-Prot : SWS_FT_FI1

30) chain A
residue 79
type BINDING
sequence F
description
source Swiss-Prot : SWS_FT_FI2

31) chain A
residue 116
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI2

32) chain A
residue 121
type BINDING
sequence V
description
source Swiss-Prot : SWS_FT_FI2

33) chain A
residue 153
type BINDING
sequence W
description
source Swiss-Prot : SWS_FT_FI2

34) chain A
residue 65
type MOD_RES
sequence L
description Phosphothreonine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI3

35) chain A
residue 251
type MOD_RES
sequence P
description Phosphothreonine => ECO:0007744|PubMed:15665377, ECO:0007744|PubMed:17330950
source Swiss-Prot : SWS_FT_FI4

36) chain A
residue 266
type MOD_RES
sequence L
description Phosphoserine => ECO:0007744|PubMed:18407956, ECO:0007744|PubMed:19779198
source Swiss-Prot : SWS_FT_FI5

37) chain A
residue 239
type CROSSLNK
sequence G
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
source Swiss-Prot : SWS_FT_FI7

38) chain A
residue 279
type CROSSLNK
sequence W
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0007744|PubMed:22106047
source Swiss-Prot : SWS_FT_FI7


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