|
|
eF-site ID
|
100d-AB |
|
PDB Code
|
100d |
|
Chain
|
A, B |
|
click to enlarge
|
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Title
|
CRYSTAL STRUCTURE OF THE HIGHLY DISTORTED CHIMERIC DECAMER R(C)D(CGGCGCCG)R(G)-SPERMINE COMPLEX-SPERMINE BINDING TO PHOSPHATE ONLY AND MINOR GROOVE TERTIARY BASE-PAIRING |
|
Classification
|
DNA-RNA HYBRID |
|
Compound
|
DNA/RNA (5'-R(*CP*)-D(*CP*GP*GP*CP*GP*CP*CP*GP*)-R(*G)-3') |
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Source
|
(100D) |
|
|
Sequence
|
A: |
CCGGCGCCGG
|
| B: |
CCGGCGCCGG
|
|
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Description
|
|
Functional site
|
|
|
1)
|
chain |
A |
| residue |
5 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE SPM A 21
|
| source |
: AC1
|
|
|
2)
|
chain |
A |
| residue |
6 |
| type |
|
| sequence |
G
|
| description |
BINDING SITE FOR RESIDUE SPM A 21
|
| source |
: AC1
|
|
|
3)
|
chain |
A |
| residue |
9 |
| type |
|
| sequence |
G
|
| description |
BINDING SITE FOR RESIDUE SPM A 21
|
| source |
: AC1
|
|
|
4)
|
chain |
B |
| residue |
13 |
| type |
|
| sequence |
G
|
| description |
BINDING SITE FOR RESIDUE SPM A 21
|
| source |
: AC1
|
|
|
5)
|
chain |
B |
| residue |
14 |
| type |
|
| sequence |
G
|
| description |
BINDING SITE FOR RESIDUE SPM A 21
|
| source |
: AC1
|
|
|
6)
|
chain |
B |
| residue |
19 |
| type |
|
| sequence |
G
|
| description |
BINDING SITE FOR RESIDUE SPM A 21
|
| source |
: AC1
|
|
|
7)
|
chain |
B |
| residue |
20 |
| type |
|
| sequence |
G
|
| description |
BINDING SITE FOR RESIDUE SPM A 21
|
| source |
: AC1
|
|
|
|