F7R
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| OP2 | P | doub | 1.48Å | 1.68Å | |
| C3' | O3' | sing | 1.43Å | 1.43Å | |
| C3' | C2' | sing | 1.53Å | 1.50Å | |
| O3' | P | sing | 1.61Å | 1.61Å | |
| P | OP1 | sing | 1.61Å | 1.62Å | |
| C1' | C2' | sing | 1.53Å | 1.52Å | |
| C1' | O1' | sing | 1.43Å | 1.44Å | |
| C2' | N2' | sing | 1.47Å | 1.48Å | |
| N2' | C2A | sing | 1.35Å | 1.35Å | |
| O2A | C2A | doub | 1.21Å | 1.24Å | |
| C2A | C2B | sing | 1.51Å | 1.51Å | |
| C2B | N1 | sing | 1.46Å | 1.48Å | |
| O2 | C2 | doub | 1.22Å | 1.23Å | |
| N1 | C2 | sing | 1.35Å | 1.34Å | |
| N1 | C6 | sing | 1.36Å | 1.40Å | |
| C2 | N3 | sing | 1.33Å | 1.38Å | |
| C6 | C5 | doub | 1.35Å | 1.39Å | |
| N3 | C4 | doub | 1.33Å | 1.36Å | |
| C5 | C4 | sing | 1.41Å | 1.40Å | |
| C4 | N4 | sing | 1.37Å | 1.34Å | |
| P | OP3 | sing | 1.61Å | 1.50Å | |
| C6 | H1 | sing | 1.08Å | 1.08Å | |
| C5 | H2 | sing | 1.08Å | 1.08Å | |
| OP1 | H3 | sing | 0.97Å | 0.95Å | |
| C3' | H4 | sing | 1.09Å | 1.10Å | |
| C3' | H5 | sing | 1.09Å | 1.10Å | |
| C2' | H6 | sing | 1.09Å | 1.10Å | |
| C1' | H7 | sing | 1.09Å | 1.10Å | |
| C1' | H8 | sing | 1.09Å | 1.10Å | |
| O1' | H9 | sing | 0.97Å | 0.95Å | |
| N2' | H10 | sing | 0.97Å | 1.00Å | |
| C2B | H11 | sing | 1.09Å | 1.10Å | |
| C2B | H12 | sing | 1.09Å | 1.10Å | |
| N4 | H13 | sing | 0.97Å | 1.00Å | |
| N4 | H14 | sing | 0.97Å | 1.00Å | |
| OP3 | H15 | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| OP2 | P | O3' | 123.4° | 109.5° |
| OP2 | P | OP1 | 118.7° | 109.4° |
| OP2 | P | OP3 | 99.6° | 109.5° |
| O3' | C3' | C2' | 101.2° | 109.4° |
| C3' | O3' | P | 117.3° | 123.0° |
| O3' | C3' | H4 | 111.5° | 109.5° |
| O3' | C3' | H5 | 111.5° | 109.5° |
| C3' | C2' | C1' | 114.3° | 109.5° |
| C3' | C2' | N2' | 105.6° | 109.5° |
| C2' | C3' | H4 | 111.5° | 109.4° |
| C2' | C3' | H5 | 111.5° | 109.5° |
| C3' | C2' | H6 | 106.1° | 109.5° |
| O3' | P | OP1 | 112.0° | 109.5° |
| O3' | P | OP3 | 103.2° | 109.5° |
| OP1 | P | OP3 | 91.2° | 109.5° |
| P | OP1 | H3 | 109.5° | 114.0° |
| C2' | C1' | O1' | 106.0° | 109.5° |
| C1' | C2' | N2' | 117.9° | 109.5° |
| C1' | C2' | H6 | 105.9° | 109.5° |
| C2' | C1' | H7 | 110.4° | 109.4° |
| C2' | C1' | H8 | 110.4° | 109.5° |
| O1' | C1' | H7 | 110.3° | 109.4° |
| O1' | C1' | H8 | 110.3° | 109.5° |
| C1' | O1' | H9 | 109.5° | 114.0° |
| C2' | N2' | C2A | 130.1° | 120.0° |
| N2' | C2' | H6 | 106.3° | 109.5° |
| C2' | N2' | H10 | 115.0° | 120.0° |
| N2' | C2A | O2A | 129.5° | 120.0° |
| N2' | C2A | C2B | 111.5° | 120.0° |
| C2A | N2' | H10 | 115.0° | 120.0° |
| O2A | C2A | C2B | 118.2° | 120.0° |
| C2A | C2B | N1 | 98.3° | 109.4° |
| C2A | C2B | H11 | 112.2° | 109.4° |
| C2A | C2B | H12 | 112.2° | 109.5° |
| C2B | N1 | C2 | 119.8° | 119.8° |
| C2B | N1 | C6 | 119.4° | 119.9° |
| N1 | C2B | H11 | 112.2° | 109.5° |
| N1 | C2B | H12 | 112.2° | 109.5° |
| O2 | C2 | N1 | 119.8° | 119.5° |
| O2 | C2 | N3 | 119.9° | 119.5° |
| C2 | N1 | C6 | 120.6° | 120.3° |
| N1 | C2 | N3 | 120.2° | 121.1° |
| N1 | C6 | C5 | 119.8° | 119.3° |
| N1 | C6 | H1 | 120.1° | 120.4° |
| C2 | N3 | C4 | 120.7° | 120.7° |
| C6 | C5 | C4 | 118.5° | 119.0° |
| C5 | C6 | H1 | 120.1° | 120.3° |
| C6 | C5 | H2 | 120.8° | 120.5° |
| N3 | C4 | C5 | 120.2° | 119.6° |
| N3 | C4 | N4 | 114.0° | 120.2° |
| C5 | C4 | N4 | 125.9° | 120.2° |
| C4 | C5 | H2 | 120.8° | 120.5° |
| C4 | N4 | H13 | 120.0° | 120.0° |
| C4 | N4 | H14 | 120.0° | 120.0° |
| P | OP3 | H15 | 109.5° | 114.0° |
| H4 | C3' | H5 | 109.5° | 109.5° |
| H7 | C1' | H8 | 109.5° | 109.5° |
| H11 | C2B | H12 | 109.4° | 109.5° |
| H13 | N4 | H14 | 120.0° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| OP2 | P | O3' | C3' | 16.3° | 55.0° |
| OP2 | P | O3' | OP1 | 152.2° | 120.0° |
| OP2 | P | O3' | OP3 | 111.0° | 120.0° |
| OP2 | P | OP1 | OP3 | 101.6° | 120.0° |
| OP2 | P | OP1 | H3 | 0.0° | 180.0° |
| OP2 | P | OP3 | H15 | 0.0° | 60.0° |
| O3' | C3' | C2' | H4 | 118.6° | 120.0° |
| O3' | C3' | C2' | H5 | 118.7° | 120.0° |
| C3' | O3' | P | OP1 | 168.5° | 65.0° |
| O3' | C3' | C2' | C1' | 161.6° | 55.0° |
| O3' | C3' | C2' | N2' | 67.3° | 65.0° |
| C3' | O3' | P | OP3 | 94.7° | 175.0° |
| O3' | C3' | H4 | H5 | 123.9° | 120.1° |
| O3' | C3' | C2' | H6 | 45.3° | 175.0° |
| C2' | C3' | O3' | P | 88.6° | 180.0° |
| C3' | C2' | C1' | N2' | 124.8° | 120.0° |
| C3' | C2' | C1' | H6 | 116.4° | 120.0° |
| C3' | C2' | C1' | O1' | 151.4° | 55.0° |
| C3' | C2' | N2' | H6 | 112.5° | 120.0° |
| C3' | C2' | N2' | C2A | 114.7° | 155.0° |
| C2' | C3' | H4 | H5 | 123.8° | 120.0° |
| C3' | C2' | C1' | H7 | 31.9° | 175.0° |
| C3' | C2' | C1' | H8 | 89.2° | 65.0° |
| C3' | C2' | N2' | H10 | 65.3° | 25.1° |
| O3' | P | OP1 | OP3 | 104.7° | 120.0° |
| O3' | P | OP1 | H3 | 153.7° | 60.0° |
| P | O3' | C3' | H4 | 30.0° | 60.1° |
| P | O3' | C3' | H5 | 152.7° | 60.0° |
| O3' | P | OP3 | H15 | 127.8° | 180.0° |
| OP1 | P | OP3 | H15 | 119.3° | 60.0° |
| C2' | C1' | O1' | H7 | 119.5° | 120.0° |
| C2' | C1' | O1' | H8 | 119.5° | 120.1° |
| C1' | C2' | N2' | H6 | 118.5° | 120.0° |
| C1' | C2' | N2' | C2A | 14.3° | 85.0° |
| C1' | C2' | C3' | H4 | 43.0° | 175.0° |
| C1' | C2' | C3' | H5 | 79.7° | 65.0° |
| C2' | C1' | H7 | H8 | 121.6° | 120.0° |
| C2' | C1' | O1' | H9 | 180.0° | 180.0° |
| C1' | C2' | N2' | H10 | 165.7° | 94.9° |
| O1' | C1' | C2' | N2' | 83.8° | 65.0° |
| O1' | C1' | C2' | H6 | 34.9° | 175.0° |
| O1' | C1' | H7 | H8 | 121.6° | 120.0° |
| C2' | N2' | C2A | H10 | 180.0° | 179.9° |
| C2' | N2' | C2A | O2A | 6.9° | 0.0° |
| C2' | N2' | C2A | C2B | 176.1° | 180.0° |
| N2' | C2' | C3' | H4 | 174.1° | 55.0° |
| N2' | C2' | C3' | H5 | 51.4° | 175.0° |
| N2' | C2' | C1' | H7 | 156.8° | 55.0° |
| N2' | C2' | C1' | H8 | 35.7° | 175.0° |
| N2' | C2A | O2A | C2B | 168.6° | 180.0° |
| N2' | C2A | C2B | N1 | 126.8° | 180.0° |
| C2A | N2' | C2' | H6 | 132.8° | 35.0° |
| N2' | C2A | C2B | H11 | 115.1° | 60.0° |
| N2' | C2A | C2B | H12 | 8.6° | 60.0° |
| O2A | C2A | C2B | N1 | 43.8° | 0.0° |
| O2A | C2A | N2' | H10 | 173.0° | 180.0° |
| O2A | C2A | C2B | H11 | 74.4° | 120.0° |
| O2A | C2A | C2B | H12 | 161.9° | 120.0° |
| C2A | C2B | N1 | H11 | 118.1° | 119.9° |
| C2A | C2B | N1 | H12 | 118.1° | 120.0° |
| C2A | C2B | N1 | C2 | 110.2° | 90.0° |
| C2A | C2B | N1 | C6 | 64.6° | 90.0° |
| C2B | C2A | N2' | H10 | 3.9° | 0.0° |
| C2A | C2B | H11 | H12 | 125.2° | 120.0° |
| C2B | N1 | C2 | O2 | 2.7° | 0.0° |
| C2B | N1 | C2 | C6 | 174.7° | 180.0° |
| C2B | N1 | C2 | N3 | 178.6° | 180.0° |
| C2B | N1 | C6 | C5 | 178.6° | 180.0° |
| C2B | N1 | C6 | H1 | 1.4° | 0.2° |
| N1 | C2B | H11 | H12 | 125.3° | 120.0° |
| O2 | C2 | N1 | N3 | 178.7° | 180.0° |
| O2 | C2 | N1 | C6 | 177.4° | 180.0° |
| O2 | C2 | N3 | C4 | 179.6° | 179.8° |
| C2 | N1 | C6 | C5 | 3.8° | 0.0° |
| N1 | C2 | N3 | C4 | 1.7° | 0.3° |
| C2 | N1 | C6 | H1 | 176.2° | 179.8° |
| C2 | N1 | C2B | H11 | 8.0° | 150.0° |
| C2 | N1 | C2B | H12 | 131.7° | 30.0° |
| C6 | N1 | C2 | N3 | 3.9° | 0.0° |
| N1 | C6 | C5 | H1 | 180.0° | 179.8° |
| N1 | C6 | C5 | C4 | 1.5° | 0.2° |
| N1 | C6 | C5 | H2 | 178.5° | 179.8° |
| C6 | N1 | C2B | H11 | 177.3° | 30.0° |
| C6 | N1 | C2B | H12 | 53.5° | 150.0° |
| C2 | N3 | C4 | C5 | 0.6° | 0.5° |
| C2 | N3 | C4 | N4 | 179.0° | 180.0° |
| C6 | C5 | C4 | N3 | 0.6° | 0.5° |
| C6 | C5 | C4 | H2 | 180.0° | 180.0° |
| C6 | C5 | C4 | N4 | 178.8° | 180.0° |
| N3 | C4 | C5 | N4 | 178.2° | 179.5° |
| N3 | C4 | C5 | H2 | 179.4° | 179.5° |
| N3 | C4 | N4 | H13 | 0.0° | 179.5° |
| N3 | C4 | N4 | H14 | 180.0° | 0.5° |
| C4 | C5 | C6 | H1 | 178.5° | 180.0° |
| C5 | C4 | N4 | H13 | 178.3° | 0.0° |
| C5 | C4 | N4 | H14 | 1.7° | 180.0° |
| N4 | C4 | C5 | H2 | 1.2° | 0.0° |
| C4 | N4 | H13 | H14 | 180.0° | 180.0° |
| OP3 | P | OP1 | H3 | 101.6° | 60.0° |
| H1 | C6 | C5 | H2 | 1.5° | 0.0° |
| H4 | C3' | C2' | H6 | 73.3° | 65.0° |
| H5 | C3' | C2' | H6 | 164.0° | 55.0° |
| H6 | C2' | C1' | H7 | 84.5° | 65.0° |
| H6 | C2' | C1' | H8 | 154.4° | 54.9° |
| H6 | C2' | N2' | H10 | 47.2° | 145.1° |
| H7 | C1' | O1' | H9 | 60.5° | 60.0° |
| H8 | C1' | O1' | H9 | 60.5° | 59.9° |
