Author results

1I9B
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X-RAY STRUCTURE OF ACETYLCHOLINE BINDING PROTEIN (ACHBP)
分子名称:ACETYLCHOLINE BINDING PROTEIN, CALCIUM ION, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
著者Brejc, K., van Dijk, W.J., Klaassen, R., Schuurmans, M., van der Oost, J., Smit, A.B., Sixma, T.K.
登録日2001-03-18
公開日2001-05-16
最終更新日2018-03-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of an ACh-binding protein reveals the ligand-binding domain of nicotinic receptors.
Nature, 411, 2001
2HTN
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E. COLI BACTERIOFERRITIN IN ITS AS-ISOLATED FORM
分子名称:Bacterioferritin, FE (III) ION, PROTOPORPHYRIN IX CONTAINING FE
著者van Eerde, A., Wolterink-Van Loo, S., Van Der Oost, J., Dijkstra, B.W.
登録日2006-07-26
公開日2006-11-21
最終更新日2014-11-12
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Fortuitous structure determination of 'as-isolated' Escherichia coli bacterioferritin in a novel crystal form.
Acta Crystallogr.,Sect.F, 62, 2006
3JUR
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THE CRYSTAL STRUCTURE OF A HYPERTHERMOACTIVE EXOPOLYGALACTURONASE FROM THERMOTOGA MARITIMA
分子名称:Exo-poly-alpha-D-galacturonosidase
著者Pijning, T., van Pouderoyen, G., Kluskens, L.D., van der Oost, J., Dijkstra, B.W.
登録日2009-09-15
公開日2009-11-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献The crystal structure of a hyperthermoactive exopolygalacturonase from Thermotoga maritima reveals a unique tetramer
Febs Lett., 2009
3DOH
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CRYSTAL STRUCTURE OF A THERMOSTABLE ESTERASE
分子名称:esterase, SULFATE ION
著者Levisson, M., Sun, L., Hendriks, S., Dijkstra, B.W., Van der Oost, J., Kengen, S.W.M.
登録日2008-07-04
公開日2009-02-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure and biochemical properties of a novel thermostable esterase containing an immunoglobulin-like domain.
J.Mol.Biol., 385, 2009
3DOI
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CRYSTAL STRUCTURE OF A THERMOSTABLE ESTERASE COMPLEX WITH PARAOXON
分子名称:esterase, DIETHYL PHOSPHONATE
著者Levisson, M., Sun, L., Hendriks, S., Dijkstra, B.W., Van der Oost, J., Kengen, S.W.M.
登録日2008-07-04
公開日2009-02-17
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure and biochemical properties of a novel thermostable esterase containing an immunoglobulin-like domain.
J.Mol.Biol., 385, 2009
1I1G
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CRYSTAL STRUCTURE OF THE LRP-LIKE TRANSCRIPTIONAL REGULATOR FROM THE ARCHAEON PYROCOCCUS FURIOSUS
分子名称:TRANSCRIPTIONAL REGULATOR LRPA
著者Leonard, P.M., Smits, S.H.J., Sedelnikova, S.E., Brinkman, A.B., de Vos, W.M., van der Oost, J., Rice, D.W., Rafferty, J.B.
登録日2001-02-01
公開日2002-02-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of the Lrp-like transcriptional regulator from the archaeon Pyrococcus furiosus.
EMBO J., 20, 2001
1X7N
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THE CRYSTAL STRUCTURE OF PYROCOCCUS FURIOSUS PHOSPHOGLUCOSE ISOMERASE WITH BOUND 5-PHOSPHO-D-ARABINONATE AND MANGANESE
分子名称:Glucose-6-phosphate isomerase, MANGANESE (II) ION, 5-PHOSPHOARABINONIC ACID
著者Berrisford, J.M., Akerboom, J., Brouns, S., Sedelnikova, S.E., Turnbull, A.P., van der Oost, J., Salmon, L., Hardre, R., Murray, I.A., Blackburn, G.M., Rice, D.W., Baker, P.J.
登録日2004-08-16
公開日2004-10-12
最終更新日2018-06-27
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis.
J.Mol.Biol., 343, 2004
1X82
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CRYSTAL STRUCTURE OF PHOSPHOGLUCOSE ISOMERASE FROM PYROCOCCUS FURIOSUS WITH BOUND 5-PHOSPHO-D-ARABINONATE
分子名称:Glucose-6-phosphate isomerase, 5-PHOSPHOARABINONIC ACID
著者Berrisford, J.M., Akerboom, J., Brouns, S., Sedelnikova, S.E., Turnbull, A.P., van der Oost, J., Salmon, L., Hardre, R., Murray, I.A., Blackburn, G.M., Rice, D.W., Baker, P.J.
登録日2004-08-17
公開日2004-10-12
最終更新日2014-09-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis.
J.Mol.Biol., 343, 2004
1X8E
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CRYSTAL STRUCTURE OF PYROCOCCUS FURIOSUS PHOSPHOGLUCOSE ISOMERASE FREE ENZYME
分子名称:Glucose-6-phosphate isomerase
著者Berrisford, J.M., Akerboom, J., Brouns, S., Sedelnikova, S.E., Turnbull, A.P., van der Oost, J., Salmon, L., Hardre, R., Murray, I.A., Blackburn, G.M., Rice, D.W., Baker, P.J.
登録日2004-08-18
公開日2004-10-12
最終更新日2014-09-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献The structures of inhibitor complexes of Pyrococcus furiosus phosphoglucose isomerase provide insights into substrate binding and catalysis.
J.Mol.Biol., 343, 2004
1XRK
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CRYSTAL STRUCTURE OF A MUTANT BLEOMYCIN BINDING PROTEIN FROM STREPTOALLOTEICHUS HINDUSTANUS DISPLAYING INCREASED THERMOSTABILITY
分子名称:Bleomycin resistance protein, SULFATE ION, BLEOMYCIN A2
著者Brouns, S.J.J., Wu, H., Akerboom, J., Turnbull, A.P., de Vos, W.M., Van der Oost, J.
登録日2004-10-15
公開日2005-01-11
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Engineering a selectable marker for hyperthermophiles
J.Biol.Chem., 280, 2005
2CG4
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STRUCTURE OF E.COLI ASNC
分子名称:REGULATORY PROTEIN ASNC, ASPARAGINE, MAGNESIUM ION
著者Thaw, P., Sedelnikova, S.E., Muranova, T., Wiese, S., Ayora, S., Alonso, J.C., Brinkman, A.B., Akerboom, J., van der Oost, J., Rafferty, J.B.
登録日2006-02-27
公開日2006-04-04
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural Insight Into Gene Transcriptional Regulation and Effector Binding by the Lrp/Asnc Family.
Nucleic Acids Res., 34, 2006
2H6E
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CRYSTAL STRUCTURE OF THE D-ARABINOSE DEHYDROGENASE FROM SULFOLOBUS SOLFATARICUS
分子名称:D-arabinose 1-dehydrogenase, ZINC ION
著者Brouns, S.J.J., Turnbull, A.P., Akerboom, J., Willemen, H.L.D.M., De Vos, W.M., Van der Oost, J.
登録日2006-05-31
公開日2007-06-05
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal Structure and Biochemical Properties of the d-Arabinose Dehydrogenase from Sulfolobus solfataricus
J.Mol.Biol., 371, 2007
2QTF
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CRYSTAL STRUCTURE OF A GTP-BINDING PROTEIN FROM THE HYPERTHERMOPHILIC ARCHAEON SULFOLOBUS SOLFATARICUS
分子名称:GTP-binding protein, CADMIUM ION, SULFATE ION, ...
著者Wu, H., Sun, L., Brouns, S.J., Fu, S., Rao, Z., Van der Oost, J.
登録日2007-08-02
公開日2008-08-19
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a GTP-binding protein from the hyperthermophilic archaeon Sulfolobus solfataricus.
To be Published
2QTH
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CRYSTAL STRUCTURE OF A GTP-BINDING PROTEIN FROM THE HYPERTHERMOPHILIC ARCHAEON SULFOLOBUS SOLFATARICUS IN COMPLEX WITH GDP
分子名称:GTP-binding protein, CADMIUM ION, MAGNESIUM ION, ...
著者Wu, H., Sun, L., Brouns, S.J., Fu, S., Rao, Z., Van der Oost, J.
登録日2007-08-02
公開日2008-08-19
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a GTP-binding protein from the hyperthermophilic archaeon Sulfolobus solfataricus.
To be Published
4Q2C
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CRYSTAL STRUCTURE OF CRISPR-ASSOCIATED PROTEIN
分子名称:CRISPR-associated helicase Cas3, NICKEL (II) ION
著者Gong, B., Shin, M., Sun, J., van der Oost, J., Kim, J.-S.
登録日2014-04-07
公開日2014-11-19
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Molecular insights into DNA interference by CRISPR-associated nuclease-helicase Cas3
Proc.Natl.Acad.Sci.USA, 2014
4Q2D
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CRYSTAL STRUCTURE OF CRISPR-ASSOCIATED PROTEIN IN COMPLEX WITH 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE
分子名称:CRISPR-associated helicase Cas3, NICKEL (II) ION, MAGNESIUM ION, ...
著者Gong, B., Shin, M., Sun, J., van der Oost, J., Kim, J.-S.
登録日2014-04-07
公開日2014-11-19
実験手法X-RAY DIFFRACTION (2.771 Å)
主引用文献Molecular insights into DNA interference by CRISPR-associated nuclease-helicase Cas3
Proc.Natl.Acad.Sci.USA, 2014
6QZK
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STRUCTURE OF CLOSTRIDIUM BUTYRICUM ARGONAUTE BOUND TO A GUIDE DNA (5' DEOXYCYTIDINE) AND A 19-MER TARGET DNA
分子名称:Clostridium butyricum Argonaute, siDNA guide (5'-D(P*CP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*TP*GP*TP*AP*TP*AP*GP*T)-3'), DNA target (5'-D(T*AP*TP*AP*CP*AP*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*T)-3'), ...
著者Swarts, D.C., Jinek, M., Hegge, J.W., Van der Oost, J.
登録日2019-03-11
公開日2019-04-24
最終更新日2019-05-22
実験手法X-RAY DIFFRACTION (3.548 Å)
主引用文献DNA-guided DNA cleavage at moderate temperatures by Clostridium butyricum Argonaute.
Nucleic Acids Res., 2019
1B3B
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THERMOTOGA MARITIMA GLUTAMATE DEHYDROGENASE MUTANT N97D, G376K
分子名称:PROTEIN (GLUTAMATE DEHYDROGENASE)
著者Knapp, S., Lebbink, J.H.G., Van Der Oost, J., Devos, W.M., Rice, D., Ladenstein, R.
登録日1998-12-07
公開日1999-12-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Engineering activity and stability of Thermotoga maritima glutamate dehydrogenase. I. Introduction of a six-residue ion-pair network in the hinge region.
J.Mol.Biol., 280, 1998
1R6V
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CRYSTAL STRUCTURE OF FERVIDOLYSIN FROM FERVIDOBACTERIUM PENNIVORANS, A KERATINOLYTIC ENZYME RELATED TO SUBTILISIN
分子名称:subtilisin-like serine protease, CALCIUM ION
著者Kim, J.S., Kluskens, L.D., de Vos, W.M., Huber, R., van der Oost, J.
登録日2003-10-17
公開日2004-10-19
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of fervidolysin from Fervidobacterium pennivorans, a keratinolytic enzyme related to subtilisin.
J.Mol.Biol., 335, 2004
1S4E
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PYROCOCCUS FURIOSUS GALACTOKINASE IN COMPLEX WITH GALACTOSE, ADP AND MAGNESIUM
分子名称:Galactokinase, ALPHA D-GALACTOSE, MAGNESIUM ION, ...
著者Hartley, A., Glynn, S.E., Barynin, V., Baker, P.J., Sedelnikova, S.E., Verhees, C., de Geus, D., van der Oost, J., Timson, D.J., Reece, R.J., Rice, D.W.
登録日2004-01-16
公開日2004-04-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Substrate specificity and mechanism from the structure of Pyrococcus furiosus galactokinase
J.Mol.Biol., 337, 2004
2TMG
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THERMOTOGA MARITIMA GLUTAMATE DEHYDROGENASE MUTANT S128R, T158E, N117R, S160E
分子名称:PROTEIN (GLUTAMATE DEHYDROGENASE)
著者Knapp, S., Lebbink, J.H.G., van der Oost, J., de Vos, W.M., Rice, D., Ladenstein, R.
登録日1998-12-04
公開日1999-12-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Engineering activity and stability of Thermotoga maritima glutamate dehydrogenase. II: construction of a 16-residue ion-pair network at the subunit interface.
J.Mol.Biol., 289, 1999
5FRD
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STRUCTURE OF A THERMOPHILIC ESTERASE
分子名称:CARBOXYLESTERASE (EST-2), COENZYME A, CHLORIDE ION, ...
著者Sayer, C., Finnigan, W., Isupov, M.N., Levisson, M., Kengen, S.W.M., van der Oost, J., Harmer, N., Littlechild, J.A.
登録日2015-12-17
公開日2016-05-25
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural and Biochemical Characterisation of Archaeoglobus Fulgidus Esterase Reveals a Bound Coa Molecule in the Vicinity of the Active Site.
Sci.Rep., 6, 2016
5NFV
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CRYSTAL STRUCTURE OF CATALYTICALLY INACTIVE FNCAS12 MUTANT BOUND TO AN R-LOOP STRUCTURE CONTAINING A PRE-CRRNA MIMIC AND FULL-LENGTH DNA TARGET
分子名称:CRISPR-associated endonuclease Cpf1, pre-crRNA, DNA target strand, ...
著者Swarts, D.C., van der Oost, J., Jinek, M.
登録日2017-03-16
公開日2017-06-14
実験手法X-RAY DIFFRACTION (2.501 Å)
主引用文献Structural Basis for Guide RNA Processing and Seed-Dependent DNA Targeting by CRISPR-Cas12a.
Mol. Cell, 66, 2017
5NG6
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CRYSTAL STRUCTURE OF FNCAS12A BOUND TO A CRRNA
分子名称:CRISPR-associated endonuclease Cpf1, crRNA, MAGNESIUM ION
著者Swarts, D.C., van der Oost, J., Jinek, M.
登録日2017-03-16
公開日2017-06-14
実験手法X-RAY DIFFRACTION (3.342 Å)
主引用文献Structural Basis for Guide RNA Processing and Seed-Dependent DNA Targeting by CRISPR-Cas12a.
Mol. Cell, 66, 2017
2MEZ
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FLEXIBLE ANCHORING OF ARCHAEAL MBF1 ON RIBOSOMES SUGGESTS ROLE AS RECRUITMENT FACTOR
分子名称:Multiprotein Bridging Factor (MBP-like)
著者Launay, H., Blombarch, F., Camilloni, C., Vendruscolo, M., van des Oost, J., Christodoulou, J.
登録日2013-10-03
公開日2014-06-25
最終更新日2014-08-20
実験手法SOLUTION NMR
主引用文献Archaeal MBF1 binds to 30S and 70S ribosomes via its helix-turn-helix domain.
Biochem.J., 462, 2014
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