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3DXS
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BU of 3dxs by Molmil
Crystal structure of a copper binding domain from HMA7, a P-type ATPase
Descriptor: Copper-transporting ATPase RAN1, LITHIUM ION, ZINC ION
Authors:Zimmermann, M, Xiao, Z, Clarke, O.B, Gulbis, J.M, Wedd, A.G.
Deposit date:2008-07-25
Release date:2009-08-11
Last modified:2021-11-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Metal binding affinities of Arabidopsis zinc and copper transporters: selectivities match the relative, but not the absolute, affinities of their amino-terminal domains.
Biochemistry, 48, 2009
2M37
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BU of 2m37 by Molmil
Structure of lasso peptide astexin-1
Descriptor: ASTEXIN-1
Authors:Zimmermann, M, Hegemann, J.D, Xie, X, Marahiel, M.A.
Deposit date:2013-01-14
Release date:2013-05-01
Method:SOLUTION NMR
Cite:The astexin-1 lasso peptides: biosynthesis, stability, and structural studies.
Chem.Biol., 20, 2013
2MLJ
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BU of 2mlj by Molmil
Structure of Lasso Peptide Caulonodin V
Descriptor: Caulonodin V
Authors:Zimmermann, M, Hegemann, J.D, Xie, X, Marahiel, M.A.
Deposit date:2014-02-28
Release date:2015-01-14
Method:SOLUTION NMR
Cite:Characterization of caulonodin lasso peptides revealed unprecedented N-terminal residues and a precursor motif essential for peptide maturation
CHEM SCI, 5, 2014
8CQS
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BU of 8cqs by Molmil
Flavin mononucleotide-dependent nitroreductase B.thetaiotaomicron (BT_0217)
Descriptor: FLAVIN MONONUCLEOTIDE, Nitroreductase-like protein, PHOSPHATE ION
Authors:Blaha, J, Gratzl, S, Mortensen, S.A, Beckham, K.S.H, Chojnowski, G, Wilmanns, M, Zimmermann, M.
Deposit date:2023-03-07
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into the diversity of nitroreductase enzymes in Bacteroides thetaiotaomicron
To Be Published
8CQT
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BU of 8cqt by Molmil
Flavin mononucleotide-dependent nitroreductase B.thetaiotaomicron (BT_1316)
Descriptor: CHLORIDE ION, FLAVIN MONONUCLEOTIDE, Putative NADH dehydrogenase/NAD(P)H nitroreductase
Authors:Blaha, J, Adam, L, Beckham, K.S.H, Chojnowski, G, Wilmanns, M, Zimmermann, M.
Deposit date:2023-03-07
Release date:2024-03-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the diversity of nitroreductase enzymes in Bacteroides thetaiotaomicron
To Be Published
8CQU
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BU of 8cqu by Molmil
Flavin mononucleotide-dependent nitroreductase B.thetaiotaomicron (BT_1680)
Descriptor: CITRIC ACID, Putative NADH dehydrogenase/NAD(P)H nitroreductase, TERTIARY-BUTYL ALCOHOL
Authors:Blaha, J, Adam, L, Beckham, K.S.H, Chojnowski, G, Wilmanns, M, Zimmermann, M.
Deposit date:2023-03-07
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the diversity of nitroreductase enzymes in Bacteroides thetaiotaomicron
To Be Published
8CQV
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BU of 8cqv by Molmil
Flavin mononucleotide-dependent nitroreductase B.thetaiotaomicron (BT_3392)
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FLAVIN MONONUCLEOTIDE, ...
Authors:Blaha, J, Adam, L, Beckham, K.S.H, Chojnowski, G, Wilmanns, M, Zimmermann, M.
Deposit date:2023-03-07
Release date:2024-03-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into the diversity of nitroreductase enzymes in Bacteroides thetaiotaomicron
To Be Published
6EQC
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BU of 6eqc by Molmil
Cryo-EM reconstruction of a complex of a binding protein and human adenovirus C5 hexon
Descriptor: Hexon protein, scFv of 9C12 antibody
Authors:Schmid, M, Ernst, P, Honegger, A, Suomalainen, M, Zimmermann, M, Braun, L, Stauffer, S, Thom, C, Dreier, B, Eibauer, M, Kipar, A, Vogel, V, Greber, U.F, Medalia, O, Plueckthun, A.
Deposit date:2017-10-12
Release date:2018-02-07
Last modified:2018-02-14
Method:ELECTRON MICROSCOPY (7.4 Å)
Cite:Adenoviral vector with shield and adapter increases tumor specificity and escapes liver and immune control.
Nat Commun, 9, 2018
5OGI
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BU of 5ogi by Molmil
Complex of a binding protein and human adenovirus C 5 hexon
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ...
Authors:Schmid, M, Ernst, P, Honegger, A, Suomalainen, M, Zimmermann, M, Braun, L, Stauffer, S, Thom, C, Dreier, B, Eibauer, M, Kipar, A, Vogel, V, Greber, U.F, Medalia, O, Plueckthun, A.
Deposit date:2017-07-13
Release date:2018-02-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Adenoviral vector with shield and adapter increases tumor specificity and escapes liver and immune control.
Nat Commun, 9, 2018
4NAG
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BU of 4nag by Molmil
Xanthomonins I III are a New Class of Lasso Peptides Featuringa Seven-Membered Macrolactam Ring
Descriptor: HEXANE-1,6-DIOL, Xanthomonin I
Authors:Hegemann, J.D, Zimmermann, M, Zhu, S, Steuber, H, Harms, K, Xie, X, Marahiel, M.A.
Deposit date:2013-10-22
Release date:2014-04-30
Last modified:2014-05-21
Method:X-RAY DIFFRACTION (0.81 Å)
Cite:Xanthomonins I-III: A New Class of Lasso Peptides with a Seven-Residue Macrolactam Ring.
Angew.Chem.Int.Ed.Engl., 53, 2014
2MMT
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BU of 2mmt by Molmil
Lasso peptide-based integrin inhibitor: Microcin J25 variant with RGDF substitution of Gly12-Ile13-Gly14-Thr15
Descriptor: Microcin J25 RGDF mutant
Authors:Hegemann, J.D, Zimmermann, M, Knappe, T.A, Xie, X, Marahiel, M.A.
Deposit date:2014-03-18
Release date:2014-07-02
Last modified:2014-07-23
Method:SOLUTION NMR
Cite:Rational improvement of the affinity and selectivity of integrin binding of grafted lasso peptides.
J.Med.Chem., 57, 2014
2L41
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BU of 2l41 by Molmil
Nab3 RRM - UCUU complex
Descriptor: RNA (5'-R(P*UP*CP*UP*U)-3'), RRM domain from Nuclear polyadenylated RNA-binding protein 3
Authors:Stefl, R, Pergoli, R, Hobor, F, Kubicek, K, Zimmermann, M, Pasulka, J, Hofr, C.
Deposit date:2010-09-28
Release date:2010-11-17
Last modified:2012-05-30
Method:SOLUTION NMR
Cite:Recognition of transcription termination signal by the nuclear polyadenylated RNA-binding (NAB) 3 protein
J.Biol.Chem., 286, 2011
2LX6
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BU of 2lx6 by Molmil
Structure of Lasso Peptide Caulosegnin I
Descriptor: Putative uncharacterized protein
Authors:Hegemann, J.D, Zimmermann, M, Xie, X, Marahiel, M.A.
Deposit date:2012-08-15
Release date:2012-12-26
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Caulosegnins I-III: A Highly Diverse Group of Lasso Peptides Derived from a Single Biosynthetic Gene Cluster.
J.Am.Chem.Soc., 135, 2013
2MFV
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BU of 2mfv by Molmil
Structure of lasso peptide xanthomonin ii
Descriptor: Xanthomonin II
Authors:Hegemann, J.D, Zimmermann, M, Harms, K, Xie, X, Marahiel, M.A.
Deposit date:2013-10-23
Release date:2014-10-29
Method:SOLUTION NMR
Cite:Xanthomonin I-III are Lasso Peptides Featuring Macrolactam Rings Consisting of Only Seven Amino Acids
To be Published
2KKH
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BU of 2kkh by Molmil
Structure of the zinc binding domain of the ATPase HMA4
Descriptor: Putative heavy metal transporter, ZINC ION
Authors:Zimmerman, M, Clarke, O, Gulbis, J.M, Keizer, D.W, Jarvis, R.S, Cobbett, C.S, Hinds, M.G, Xiao, Z, Wedd, A.G.
Deposit date:2009-06-20
Release date:2010-01-26
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Metal binding affinities of Arabidopsis zinc and copper transporters: selectivities match the relative, but not the absolute, affinities of their amino-terminal domains
Biochemistry, 48, 2009
4OBV
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BU of 4obv by Molmil
Ruminococcus gnavus tryptophan decarboxylase RUMGNA_01526 (alpha-FMT)
Descriptor: Pyridoxal-dependent decarboxylase domain protein, alpha-(fluoromethyl)-D-tryptophan, {5-hydroxy-4-[(1E)-4-(1H-indol-3-yl)-3-oxobut-1-en-1-yl]-6-methylpyridin-3-yl}methyl dihydrogen phosphate
Authors:Fraser, J.S, Van Benschoten, A.H.
Deposit date:2014-01-07
Release date:2014-10-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Discovery and Characterization of Gut Microbiota Decarboxylases that Can Produce the Neurotransmitter Tryptamine.
Cell Host Microbe, 16, 2014
4OBU
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BU of 4obu by Molmil
Ruminococcus gnavus tryptophan decarboxylase RUMGNA_01526 (apo)
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Pyridoxal-dependent decarboxylase domain protein
Authors:Van Benschoten, A.H, Fraser, J.S.
Deposit date:2014-01-07
Release date:2014-10-29
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.804 Å)
Cite:Discovery and Characterization of Gut Microbiota Decarboxylases that Can Produce the Neurotransmitter Tryptamine.
Cell Host Microbe, 16, 2014
3UVQ
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BU of 3uvq by Molmil
Human p38 MAP Kinase in Complex with a Dibenzosuberone Derivative
Descriptor: Mitogen-activated protein kinase 14, N-{5-[(7-{[(2R)-2,3-dihydroxypropyl]oxy}-5-oxo-10,11-dihydro-5H-dibenzo[a,d][7]annulen-2-yl)amino]-2-fluorophenyl}benzamide, octyl beta-D-glucopyranoside
Authors:Mayer-Wrangowski, S.C, Richters, A, Gruetter, C, Rauh, D.
Deposit date:2011-11-30
Release date:2012-12-05
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Dibenzosuberones as p38 mitogen-activated protein kinase inhibitors with low ATP competitiveness and outstanding whole blood activity.
J.Med.Chem., 56, 2013
2L2K
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BU of 2l2k by Molmil
Solution NMR structure of the R/G STEM LOOP RNA-ADAR2 DSRBM2 Complex
Descriptor: Adenosine deaminase, RNA (42-MER)
Authors:Allain, F.H.-T, Oberstrass, F.C, Stefl, R.
Deposit date:2010-08-20
Release date:2010-10-27
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove.
Cell(Cambridge,Mass.), 143, 2010
2L3J
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BU of 2l3j by Molmil
The solution structure of the ADAR2 dsRBM-RNA complex reveals a sequence-specific read out of the minor groove
Descriptor: Double-stranded RNA-specific editase 1, RNA (71-MER)
Authors:Stefl, R, Oberstrass, F.C, Allain, F.H.-T.
Deposit date:2010-09-14
Release date:2010-10-27
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove.
Cell(Cambridge,Mass.), 143, 2010
2L3C
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BU of 2l3c by Molmil
Solution structure of ADAR2 dsRBM1 bound to LSL RNA
Descriptor: Double-stranded RNA-specific editase 1, RNA (34-MER)
Authors:Allain, F, Stefl, R, Oberstrass, F.
Deposit date:2010-09-12
Release date:2010-10-27
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove.
Cell(Cambridge,Mass.), 143, 2010
2L2J
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BU of 2l2j by Molmil
Solution NMR structure of the lower part of the R/G stem loop RNA
Descriptor: RNA (42-MER)
Authors:Oberstrass, F.F, Allain, F.H.-T, Stefl, R.
Deposit date:2010-08-20
Release date:2010-10-27
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove.
Cell(Cambridge,Mass.), 143, 2010

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