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4WQN
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BU of 4wqn by Molmil
Crystal structure of N6-methyladenosine RNA reader YTHDF2
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, YTH domain-containing family protein 2
Authors:Zhu, T, Roundtree, I.A, Wang, P, Wang, X, Wang, L, Sun, C, Tian, Y, Li, J, He, C, Xu, Y.
Deposit date:2014-10-22
Release date:2014-11-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.121 Å)
Cite:Crystal structure of the YTH domain of YTHDF2 reveals mechanism for recognition of N6-methyladenosine.
Cell Res., 24, 2014
3WZS
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BU of 3wzs by Molmil
Crystal structure of Trx3 domain of UGGT (detergent-bound form)
Descriptor: 3,6,12,15,18,21,24-HEPTAOXAHEXATRIACONTAN-1-OL, UDP-glucose-glycoprotein glucosyltransferase-like protein
Authors:Zhu, T, Satoh, T, Kato, K.
Deposit date:2014-10-03
Release date:2014-12-03
Last modified:2014-12-31
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insight into substrate recognition by the endoplasmic reticulum folding-sensor enzyme: crystal structure of third thioredoxin-like domain of UDP-glucose:glycoprotein glucosyltransferase
Sci Rep, 4, 2014
3WZT
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BU of 3wzt by Molmil
Crystal structure of Trx3 domain of UGGT (detergent-unbound form)
Descriptor: UDP-glucose-glycoprotein glucosyltransferase-like protein
Authors:Zhu, T, Satoh, T, Kato, K.
Deposit date:2014-10-03
Release date:2014-12-03
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural insight into substrate recognition by the endoplasmic reticulum folding-sensor enzyme: crystal structure of third thioredoxin-like domain of UDP-glucose:glycoprotein glucosyltransferase
Sci Rep, 4, 2014
5XSQ
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BU of 5xsq by Molmil
Crystal Structure of the Marburg Virus Nucleoprotein Core Domain Chaperoned by a VP35 Peptide
Descriptor: Nucleoprotein, Peptide from Polymerase cofactor VP35
Authors:Zhu, T, Song, H, Shi, Y, Qi, J, Gao, G.F.
Deposit date:2017-06-15
Release date:2017-06-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of the Marburg Virus Nucleoprotein Core Domain Chaperoned by a VP35 Peptide Reveals a Conserved Drug Target for Filovirus
J. Virol., 91, 2017
5H18
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BU of 5h18 by Molmil
Crystal structure of catalytic domain of UGGT (UDP-glucose-bound form) from Thermomyces dupontii
Descriptor: CALCIUM ION, GLYCEROL, UGGT, ...
Authors:Satoh, T, Zhu, T, Toshimori, T, Kamikubo, H, Uchihashi, T, Kato, K.
Deposit date:2016-10-08
Release date:2017-09-27
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Visualisation of a flexible modular structure of the ER folding-sensor enzyme UGGT.
Sci Rep, 7, 2017
4QG6
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BU of 4qg6 by Molmil
crystal structure of PKM2-Y105E mutant
Descriptor: PROLINE, Pyruvate kinase PKM
Authors:Wang, P, Sun, C, Zhu, T, Xu, Y.
Deposit date:2014-05-22
Release date:2015-02-25
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (3.207 Å)
Cite:Structural insight into mechanisms for dynamic regulation of PKM2.
Protein Cell, 6, 2015
4QG8
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BU of 4qg8 by Molmil
crystal structure of PKM2-K305Q mutant
Descriptor: GLYCEROL, MAGNESIUM ION, MALONATE ION, ...
Authors:Wang, P, Sun, C, Zhu, T, Xu, Y.
Deposit date:2014-05-22
Release date:2015-02-25
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insight into mechanisms for dynamic regulation of PKM2.
Protein Cell, 6, 2015
4QG9
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BU of 4qg9 by Molmil
crystal structure of PKM2-R399E mutant
Descriptor: ACETATE ION, MAGNESIUM ION, Pyruvate kinase PKM
Authors:Wang, P, Sun, C, Zhu, T, Xu, Y.
Deposit date:2014-05-22
Release date:2015-02-25
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.381 Å)
Cite:Structural insight into mechanisms for dynamic regulation of PKM2.
Protein Cell, 6, 2015
4RPP
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BU of 4rpp by Molmil
crystal structure of PKM2-K422R mutant bound with FBP
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, Pyruvate kinase PKM
Authors:Wang, P, Sun, C, Zhu, T, Xu, Y.
Deposit date:2014-10-31
Release date:2015-02-25
Last modified:2023-04-05
Method:X-RAY DIFFRACTION (2.585 Å)
Cite:Structural insight into mechanisms for dynamic regulation of PKM2.
Protein Cell, 6, 2015
4QGC
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BU of 4qgc by Molmil
crystal structure of PKM2-K422R mutant
Descriptor: GLYCEROL, POTASSIUM ION, Pyruvate kinase PKM, ...
Authors:Wang, P, Sun, C, Zhu, T, Xu, Y.
Deposit date:2014-05-22
Release date:2015-02-25
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.296 Å)
Cite:Structural insight into mechanisms for dynamic regulation of PKM2.
Protein Cell, 6, 2015
4GY5
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BU of 4gy5 by Molmil
Crystal structure of the tandem tudor domain and plant homeodomain of UHRF1 with Histone H3K9me3
Descriptor: E3 ubiquitin-protein ligase UHRF1, Peptide from Histone H3.3, ZINC ION
Authors:Cheng, J, Yang, Y, Fang, J, Xiao, J, Zhu, T, Chen, F, Wang, P, Xu, Y.
Deposit date:2012-09-05
Release date:2012-11-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.956 Å)
Cite:Structural insight into coordinated recognition of trimethylated histone H3 lysine 9 (H3K9me3) by the plant homeodomain (PHD) and tandem tudor domain (TTD) of UHRF1 (ubiquitin-like, containing PHD and RING finger domains, 1) protein
J.Biol.Chem., 288, 2013
4GU0
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BU of 4gu0 by Molmil
Crystal structure of LSD2 with H3
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Histone H3.3, Lysine-specific histone demethylase 1B, ...
Authors:Chen, F, Yang, H, Dong, Z, Fang, J, Zhu, T, Gong, W, Xu, Y.
Deposit date:2012-08-29
Release date:2013-02-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.103 Å)
Cite:Structural insight into substrate recognition by histone demethylase LSD2/KDM1b
Cell Res., 23, 2013
5Y7F
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BU of 5y7f by Molmil
Crystal structure of catalytic domain of UGGT (UDP-bound form) from Thermomyces dupontii
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, UGGT, ...
Authors:Satoh, T, Song, C, Zhu, T, Toshimori, T, Murata, K, Hayashi, Y, Kamikubo, H, Uchihashi, T, Kato, K.
Deposit date:2017-08-17
Release date:2017-09-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Visualisation of a flexible modular structure of the ER folding-sensor enzyme UGGT.
Sci Rep, 7, 2017
5Y7O
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BU of 5y7o by Molmil
Crystal structure of folding sensor region of UGGT from Thermomyces dupontii
Descriptor: UGGT
Authors:Satoh, T, Song, C, Zhu, T, Toshimori, T, Murata, K, Hayashi, Y, Kamikubo, H, Uchihashi, T, Kato, K.
Deposit date:2017-08-17
Release date:2017-09-27
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Visualisation of a flexible modular structure of the ER folding-sensor enzyme UGGT.
Sci Rep, 7, 2017
7XN2
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BU of 7xn2 by Molmil
Crystal structure of CvkR, a novel MerR-type transcriptional regulator
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Alr3614 protein, DI(HYDROXYETHYL)ETHER
Authors:Liang, Y.J, Zhu, T, Ma, H.L, Lu, X.F, Hess, W.R.
Deposit date:2022-04-27
Release date:2023-03-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:CvkR is a MerR-type transcriptional repressor of class 2 type V-K CRISPR-associated transposase systems.
Nat Commun, 14, 2023
6UFF
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BU of 6uff by Molmil
Structure of Ene-reductase 1 NostocER1 from cyanobacteria
Descriptor: CALCIUM ION, Ene-reductase 1, FLAVIN MONONUCLEOTIDE
Authors:Sandoval, B, Jeffrey, P.D, Hyster, T.
Deposit date:2019-09-24
Release date:2020-03-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.007 Å)
Cite:Photoenzymatic Hydrogenation of Heteroaromatic Olefins Using 'Ene'-Reductases with Photoredox Catalysts.
Angew.Chem.Int.Ed.Engl., 59, 2020
2V5A
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BU of 2v5a by Molmil
CRYSTAL STRUCTURE OF BIOTIN CARBOXYLASE FROM E.COLI IN COMPLEX WITH POTENT INHIBITOR 3
Descriptor: 7-(2,5-dihydropyrrol-1-yl)-6-phenyl-pyrido[6,5-d]pyrimidin-2-amine, BIOTIN CARBOXYLASE, CHLORIDE ION
Authors:Mochalkin, I, Miller, J.R.
Deposit date:2008-10-02
Release date:2009-01-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:A Class of Selective Antibacterials Derived from a Protein Kinase Inhibitor Pharmacophore.
Proc.Natl.Acad.Sci.USA, 106, 2009
2V59
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BU of 2v59 by Molmil
CRYSTAL STRUCTURE OF BIOTIN CARBOXYLASE FROM E.COLI IN COMPLEX WITH POTENT INHIBITOR 2
Descriptor: 6-(2,6-DIMETHOXYPHENYL)PYRIDO[2,3-D]PYRIMIDINE-2,7-DIAMINE, BIOTIN CARBOXYLASE
Authors:Mochalkin, I, Miller, J.R.
Deposit date:2008-10-02
Release date:2009-01-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Class of Selective Antibacterials Derived from a Protein Kinase Inhibitor Pharmacophore.
Proc.Natl.Acad.Sci.USA, 106, 2009
2V58
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BU of 2v58 by Molmil
CRYSTAL STRUCTURE OF BIOTIN CARBOXYLASE FROM E.COLI IN COMPLEX WITH POTENT INHIBITOR 1
Descriptor: 6-(2,6-dibromophenyl)pyrido[2,3-d]pyrimidine-2,7-diamine, BIOTIN CARBOXYLASE, CHLORIDE ION
Authors:Mochalkin, I, Miller, J.R.
Deposit date:2008-10-02
Release date:2009-01-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Class of Selective Antibacterials Derived from a Protein Kinase Inhibitor Pharmacophore.
Proc.Natl.Acad.Sci.USA, 106, 2009
7KPT
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BU of 7kpt by Molmil
Crystal structure of CtdE in complex with FAD and substrate 4
Descriptor: (6aR,7aS,11S,13aS)-6,6,11-trimethyl-4-(3-methylbut-2-en-1-yl)-6,6a,7,8,9,10,11,14-octahydro-5H,13H-13a,7a-(epiminomethano)quinolizino[2,3-b]carbazol-16-one, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Zhao, B, Hu, L.
Deposit date:2020-11-12
Release date:2021-06-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural basis of the stereoselective formation of the spirooxindole ring in the biosynthesis of citrinadins.
Nat Commun, 12, 2021
7KPQ
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BU of 7kpq by Molmil
Crystal structure of CtdE in complex with FAD
Descriptor: FAD-dependent monooxygenase CtdE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Zhao, B, Hu, L.
Deposit date:2020-11-12
Release date:2021-06-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the stereoselective formation of the spirooxindole ring in the biosynthesis of citrinadins.
Nat Commun, 12, 2021
4HSU
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BU of 4hsu by Molmil
Crystal structure of LSD2-NPAC with H3(1-26)in space group P21
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Histone H3, Lysine-specific histone demethylase 1B, ...
Authors:Chen, F, Dong, Z, Fang, J, Xu, Y.
Deposit date:2012-10-30
Release date:2013-02-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.988 Å)
Cite:Structural insight into substrate recognition by histone demethylase LSD2/KDM1b.
Cell Res., 23, 2013
8I3X
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BU of 8i3x by Molmil
Rice APIP6-RING homodimer
Descriptor: RING-type domain-containing protein, ZINC ION
Authors:Zheng, Y, Zhang, X, Liu, Y, Liu, J, Wang, D.
Deposit date:2023-01-18
Release date:2023-11-29
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of rice APIP6 reveals a new dimerization mode of RING-type E3 ligases that facilities the construction of its working model
Phytopathol Res, 5, 2023
6LF5
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BU of 6lf5 by Molmil
The solution structure of ShSPI
Descriptor: ShSPI
Authors:Luan, N, Rong, M.Q, Liu, J.X, Lai, R.
Deposit date:2019-11-29
Release date:2020-12-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Identification and Characterization of ShSPI, a Kazal-Type Elastase Inhibitor from the Venom of Scolopendra Hainanum .
Toxins, 11, 2019
7WOQ
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BU of 7woq by Molmil
The state 1 of Omicron Spike with bispecific antibody FD01
Descriptor: 16L9 Fv, 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Zhang, X, Zhan, W.Q, Chen, Z.G, Sun, L.
Deposit date:2022-01-22
Release date:2022-11-30
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Combating the SARS-CoV-2 Omicron (BA.1) and BA.2 with potent bispecific antibodies engineered from non-Omicron neutralizing antibodies
Cell Discov, 8, 2022

 

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