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4OHB
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CRYSTAL STRUCTURE OF MILB E103A IN COMPLEX WITH 5-HYDROXYMETHYLCYTIDINE 5'-MONOPHOSPHATE (HMCMP) FROM STREPTOMYCES RIMOFACIENS
Descriptor:CMP/hydroxymethyl CMP hydrolase
Authors:Zhao, G., Zhang, Y., Liu, G., Wu, G., He, X.
Deposit date:2014-01-17
Release date:2014-06-25
Last modified:2016-10-19
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of the N-glycosidase MilB in complex with hydroxymethyl CMP reveals its Arg23 specifically recognizes the substrate and controls its entry
Nucleic Acids Res., 42, 2014
4OHR
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CRYSTAL STRUCTURE OF MILB FROM STREPTOMYCES RIMOFACIENS
Descriptor:CMP/hydroxymethyl CMP hydrolase
Authors:Zhao, G., Zhang, Y., Liu, G., Wu, G., He, X.
Deposit date:2014-01-17
Release date:2014-06-25
Last modified:2016-10-19
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the N-glycosidase MilB in complex with hydroxymethyl CMP reveals its Arg23 specifically recognizes the substrate and controls its entry
Nucleic Acids Res., 42, 2014
2HPJ
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CRYSTAL STRUCTURE OF THE PUB DOMAIN OF MOUSE PNGASE
Descriptor:PNGase (E.C.3.5.1.52)
Authors:Zhao, G., Zhou, X., Wang, L., Li, G., Lennarz, W., Schindelin, H.
Deposit date:2006-07-17
Release date:2007-05-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Studies on peptide:N-glycanase-p97 interaction suggest that p97 phosphorylation modulates endoplasmic reticulum-associated degradation.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2HPL
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CRYSTAL STRUCTURE OF THE MOUSE P97/PNGASE COMPLEX
Descriptor:PNGase (E.C.3.5.1.52), C-terminal of mouse p97/VCP
Authors:Zhao, G., Zhou, X., Wang, L., Li, G., Lennarz, W., Schindelin, H.
Deposit date:2006-07-17
Release date:2007-05-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Studies on peptide:N-glycanase-p97 interaction suggest that p97 phosphorylation modulates endoplasmic reticulum-associated degradation.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2F4M
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THE MOUSE PNGASE-HR23 COMPLEX REVEALS A COMPLETE REMODULATION OF THE PROTEIN-PROTEIN INTERFACE COMPARED TO ITS YEAST ORTHOLOGS
Descriptor:peptide N-glycanase (E.C.3.5.1.52), UV excision repair protein RAD23 homolog B
Authors:Zhao, G., Zhou, X., Wang, L., Kisker, C., Lennarz, W.J., Schindelin, H.
Deposit date:2005-11-23
Release date:2006-03-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the mouse peptide N-glycanase-HR23 complex suggests co-evolution of the endoplasmic reticulum-associated degradation and DNA repair pathways.
J.Biol.Chem., 281, 2006
2F4O
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THE MOUSE PNGASE-HR23 COMPLEX REVEALS A COMPLETE REMODULATION OF THE PROTEIN-PROTEIN INTERFACE COMPARED TO ITS YEAST ORTHOLOGS
Descriptor:peptide N-glycanase (E.C.3.5.1.52), XP-C repair complementing complex 58 kDa protein, PHQ-VAL-ALA-ASP-CF0
Authors:Zhao, G., Zhou, X., Wang, L., Kisker, C., Lennarz, W.J., Schindelin, H.
Deposit date:2005-11-23
Release date:2006-03-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structure of the mouse peptide N-glycanase-HR23 complex suggests co-evolution of the endoplasmic reticulum-associated degradation and DNA repair pathways.
J.Biol.Chem., 281, 2006
3ESW
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COMPLEX OF YEAST PNGASE WITH GLCNAC2-IAC.
Descriptor:Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase (E.C.3.5.1.52), UV excision repair protein RAD23
Authors:Zhao, G., Zhou, X., Lennarz, W.J., Schindelin, H.
Deposit date:2008-10-06
Release date:2008-11-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural and mutational studies on the importance of oligosaccharide binding for the activity of yeast PNGase.
Glycobiology, 19, 2009
3GAE
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CRYSTAL STRUCTURE OF PUL
Descriptor:Protein DOA1
Authors:Zhao, G., Schindelin, H., Lennarz, W.J.
Deposit date:2009-02-17
Release date:2009-12-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:An Armadillo motif in Ufd3 interacts with Cdc48 and is involved in ubiquitin homeostasis and protein degradation
Proc.Natl.Acad.Sci.USA, 106, 2009
5JNH
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CRYSTAL STRUCTURE OF CYTIDINE MONOPHOSPHATE HYDROXYMETHYLASE MILA
Descriptor:CMP 5-hydroxymethylase
Authors:Zhao, G., He, X.
Deposit date:2016-04-30
Release date:2017-01-25
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Structural basis of the substrate preference towards CMP for a thymidylate synthase MilA involved in mildiomycin biosynthesis
Sci Rep, 6, 2016
5JP9
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CRYSTAL STRUCTURE OF CYTIDINE MONOPHOSPHATE HYDROXYMETHYLASE MILA WITH DCMP
Descriptor:CMP 5-hydroxymethylase
Authors:Zhao, G., He, X.
Deposit date:2016-05-03
Release date:2017-03-15
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structural basis of the substrate preference towards CMP for a thymidylate synthase MilA involved in mildiomycin biosynthesis
Sci Rep, 6, 2016
1L9C
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ROLE OF HISTIDINE 269 IN CATALYSIS BY MONOMERIC SARCOSINE OXIDASE
Descriptor:Monomeric sarcosine oxidase (E.C.1.5.3.1)
Authors:Zhao, G., Song, H., Chen, Z.-w., Mathews, F.S., Jorns, M.S.
Deposit date:2002-03-22
Release date:2002-08-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Monomeric sarcosine oxidase: role of histidine 269 in catalysis.
Biochemistry, 41, 2002
1L9D
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ROLE OF HISTIDINE 269 IN CATALYSIS BY MONOMERIC SARCOSINE OXIDASE
Descriptor:Monomeric sarcosine oxidase (E.C.1.5.3.1)
Authors:Zhao, G., Song, H., Chen, Z.-w., Mathews, F.S., Jorns, M.S.
Deposit date:2002-03-22
Release date:2002-08-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Monomeric sarcosine oxidase: role of histidine 269 in catalysis.
Biochemistry, 41, 2002
1L9E
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ROLE OF HISTIDINE 269 IN CATALYSIS BY MONOMERIC SARCOSINE OXIDASE
Descriptor:Monomeric sarcosine oxidase (E.C.1.5.3.1)
Authors:Zhao, G., Song, H., Chen, Z.-w., Mathews, F.S., Jorns, M.S.
Deposit date:2002-03-22
Release date:2002-08-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Monomeric sarcosine oxidase: role of histidine 269 in catalysis.
Biochemistry, 41, 2002
2NWN
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NEW PHARMACOPHORE FOR SERINE PROTEASE INHIBITION REVEALED BY CRYSTAL STRUCTURE OF HUMAN UROKINASE-TYPE PLASMINOGEN ACTIVATOR COMPLEXED WITH A CYCLIC PEPTIDYL INHIBITOR, UPAIN-1
Descriptor:Plasminogen activator, urokinase, uPA
Authors:Zhao, G., Yuan, C., Wind, T., Andreasen, P.A., Huang, Z., Huang, M., Structural Genomics Consortium (SGC)
Deposit date:2006-11-16
Release date:2007-10-16
Last modified:2009-02-24
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis of specificity of a peptidyl urokinase inhibitor, upain-1
J.Struct.Biol., 160, 2007
2O8T
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CRYSTAL STRUCTURE AND BINDING EPITOPES OF UROKINASE-TYPE PLASMINOGEN ACTIVATOR (C122A/N145Q) IN COMPLEX WITH INHIBITORS
Descriptor:Urokinase plasminogen activator (E.C.3.4.21.73)
Authors:Zhao, G., Yuan, C., Jiang, L., Huang, Z., Huang, M.
Deposit date:2006-12-12
Release date:2007-12-25
Last modified:2009-02-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q/S195A) in complex with Inhibitors
To be Published
2O8U
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CRYSTAL STRUCTURE AND BINDING EPITOPES OF UROKINASE-TYPE PLASMINOGEN ACTIVATOR (C122A/N145Q/S195A) IN COMPLEX WITH INHIBITORS
Descriptor:Urokinase plasminogen activator (E.C.3.4.21.73)
Authors:Zhao, G., Yuan, C., Jiang, L., Huang, Z., Huang, M.
Deposit date:2006-12-12
Release date:2007-12-25
Last modified:2009-02-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q/S195A) in complex with Inhibitors
To be Published
2O8W
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CRYSTAL STRUCTURE AND BINDING EPITOPES OF UROKINASE-TYPE PLASMINOGEN ACTIVATOR (C122A/N145Q/S195A) IN COMPLEX WITH INHIBITORS
Descriptor:Urokinase plasminogen activator (E.C.3.4.21.73)
Authors:Zhao, G., Yuan, C., Jiang, L., Huang, Z., Huang, M.
Deposit date:2006-12-12
Release date:2007-12-25
Last modified:2009-02-24
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal Structure and Binding Epitopes of Urokinase-type Plasminogen Activator (C122A/N145Q/S195A) in complex with Inhibitors
To be Published
3J34
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STRUCTURE OF HIV-1 CAPSID PROTEIN BY CRYO-EM
Descriptor:capsid protein
Authors:Zhao, G., Perilla, J.R., Yufenyuy, E., Meng, X., Chen, B., Ning, J., Ahn, J., Gronenborn, A.M., Schulten, K., Aiken, C., Zhang, P.
Deposit date:2013-02-23
Release date:2013-05-29
Last modified:2013-06-19
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
3J4F
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STRUCTURE OF HIV-1 CAPSID PROTEIN BY CRYO-EM
Descriptor:capsid protein
Authors:Zhao, G., Perilla, J.R., Meng, X., Schulten, K., Zhang, P.
Deposit date:2013-07-11
Release date:2013-07-24
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
4KZT
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STRUCTURE MMNAGS BOUND WITH L-ARGININE
Descriptor:N-acetylglutamate kinase / N-acetylglutamate synthase (E.C.2.3.1.1, 2.7.2.8)
Authors:Zhao, G., Jin, Z., Allewell, N.M., Tuchman, M., Shi, D.
Deposit date:2013-05-30
Release date:2014-04-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of N-acetyl-L-glutamate synthase/kinase from Maricaulis maris with the allosteric inhibitor L-arginine bound.
Biochem.Biophys.Res.Commun., 437, 2013
4NEX
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STRUCTURE OF THE N-ACETYLTRANSFERASE DOMAIN OF X. FASTIDIOSA NAGS/K
Descriptor:Acetylglutamate kinase (E.C.2.7.2.8)
Authors:Zhao, G., Jin, Z., Allewell, N.M., Tuchman, M., Shi, D.
Deposit date:2013-10-30
Release date:2014-11-12
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (1.6955 Å)
Cite:Structures of the N-acetyltransferase domain of Xylella fastidiosaN-acetyl-L-glutamate synthase/kinase with and without a His tag bound to N-acetyl-L-glutamate.
Acta Crystallogr F Struct Biol Commun, 71, 2015
4NF1
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STRUCTURE OF N-ACETYLTRANSFERASE DOMAIN OF X. FASTIDIOSA NAGS/K WITHOUT HIS-TAG
Descriptor:Acetylglutamate kinase (E.C.2.7.2.8)
Authors:Zhao, G., Jin, Z., Allewell, N.M., Tuchman, M., Shi, D.
Deposit date:2013-10-30
Release date:2014-11-12
Last modified:2015-02-04
Method:X-RAY DIFFRACTION (1.3986 Å)
Cite:Structures of the N-acetyltransferase domain of Xylella fastidiosaN-acetyl-L-glutamate synthase/kinase with and without a His tag bound to N-acetyl-L-glutamate.
Acta Crystallogr F Struct Biol Commun, 71, 2015
3J3Q
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ATOMIC-LEVEL STRUCTURE OF THE ENTIRE HIV-1 CAPSID
Descriptor:HIV-1 capsid
Authors:Perilla, J.R., Zhao, G., Zhang, P., Schulten, K.J.
Deposit date:2013-04-12
Release date:2013-05-29
Last modified:2014-12-10
Method:ELECTRON MICROSCOPY
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
3J3Y
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ATOMIC-LEVEL STRUCTURE OF THE ENTIRE HIV-1 CAPSID (186 HEXAMERS + 12 PENTAMERS)
Descriptor:HIV-1 capsid
Authors:Perilla, J.R., Zhao, G., Zhang, P., Schulten, K.J.
Deposit date:2013-05-06
Release date:2013-05-29
Last modified:2014-12-10
Method:ELECTRON MICROSCOPY
Cite:Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.
Nature, 497, 2013
4I49
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STRUCTURE OF NGNAGS BOUND WITH BISUBSTRATE ANALOG COA-NAG
Descriptor:Amino-acid acetyltransferase (E.C.2.3.1.1)
Authors:Shi, D., Zhao, G., Allewell, N.M., Tuchman, M.
Deposit date:2012-11-27
Release date:2013-01-09
Last modified:2013-03-06
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure of the complex of Neisseria gonorrhoeae N-acetyl-l-glutamate synthase with a bound bisubstrate analog.
Biochem.Biophys.Res.Commun., 430, 2013
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