Author results

3LGD
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CRYSTAL STRUCTURE OF HUMAN ADENOSINE DEAMINASE GROWTH FACTOR, ADENOSINE DEAMINASE TYPE 2 (ADA2)
Descriptor:Adenosine deaminase CECR1, N-ACETYL-D-GLUCOSAMINE, ZINC ION, ...
Authors:Zavialov, A.V.
Deposit date:2010-01-20
Release date:2010-02-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis for the growth factor activity of human adenosine deaminase ADA2.
J.Biol.Chem., 285, 2010
3LGG
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CRYSTAL STRUCTURE OF HUMAN ADENOSINE DEAMINASE GROWTH FACTOR, ADENOSINE DEAMINASE TYPE 2 (ADA2) COMPLEXED WITH TRANSITION STATE ANALOGUE, COFORMYCIN
Descriptor:Adenosine deaminase CECR1, N-ACETYL-D-GLUCOSAMINE, ZINC ION, ...
Authors:Zavialov, A.V.
Deposit date:2010-01-20
Release date:2010-02-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the growth factor activity of human adenosine deaminase ADA2.
J.Biol.Chem., 285, 2010
1P5U
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X-RAY STRUCTURE OF THE TERNARY CAF1M:CAF1:CAF1 CHAPERONE:SUBUNIT:SUBUNIT COMPLEX
Descriptor:Chaperone protein Caf1M, F1 capsule antigen
Authors:Zavialov, A.V., Berglund, J., Pudney, A.F., Fooks, L.J., Ibrahim, T.M., MacIntyre, S., Knight, S.D.
Deposit date:2003-04-28
Release date:2003-06-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structure and Biogenesis of the Capsular F1 Antigen from Yersinia pestis. Preserved Folding Energy Drives Fiber Formation
Cell(Cambridge,Mass.), 113, 2003
1P5V
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X-RAY STRUCTURE OF THE CAF1M:CAF1 CHAPERONE:SUBUNIT PREASSEMBLY COMPLEX
Descriptor:Chaperone protein Caf1M, F1 capsule antigen
Authors:Zavialov, A.V., Berglund, J., Pudney, A.F., Fooks, L.J., Ibrahim, T.M., MacIntyre, S., Knight, S.D.
Deposit date:2003-04-28
Release date:2003-06-24
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structure and Biogenesis of the Capsular F1 Antigen from Yersinia pestis. Preserved Folding Energy Drives Fiber Formation
Cell(Cambridge,Mass.), 113, 2003
1Z9S
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CRYSTAL STRUCTURE OF THE NATIVE CHAPERONE:SUBUNIT:SUBUNIT CAF1M:CAF1:CAF1 COMPLEX
Descriptor:Chaperone protein Caf1M, F1 capsule antigen
Authors:Zavialov, A.V., Tischenko, V.M., Fooks, L.J., Brandsdal, B.O., Aqvist, J., Zav'yalov, V.P., Macintyre, S., Knight, S.D.
Deposit date:2005-04-04
Release date:2005-06-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Resolving the energy paradox of chaperone/usher-mediated fibre assembly
Biochem.J., 389, 2005
2RDO
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50S SUBUNIT WITH EF-G(GDPNP) AND RRF BOUND
Descriptor:5S RIBOSOMAL RNA, 23S RIBOSOMAL RNA, 50S ribosomal protein L25, ...
Authors:Gao, N., Zavialov, A.V., Ehrenberg, M., Frank, J.
Deposit date:2007-09-24
Release date:2008-03-04
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9.1 Å)
Cite:Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits.
J.Mol.Biol., 374, 2007
1ZN0
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COORDINATES OF RRF AND EF-G FITTED INTO CRYO-EM MAP OF THE 50S SUBUNIT BOUND WITH BOTH EF-G (GDPNP) AND RRF
Descriptor:16S RIBOSOMAL RNA, Ribosome recycling factor, ELONGATION FACTOR G
Authors:Gao, N., Zavialov, A.V., Li, W., Sengupta, J., Valle, M., Gursky, R.P., Ehrenberg, M., Frank, J.
Deposit date:2005-05-11
Release date:2005-06-14
Last modified:2011-07-13
Method:ELECTRON MICROSCOPY (15.5 Å)
Cite:Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.
Mol.Cell, 18, 2005
1ZN1
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COORDINATES OF RRF FITTED INTO CRYO-EM MAP OF THE 70S POST-TERMINATION COMPLEX
Descriptor:ribosomal 23S RNA, ribosomal 16S RNA, Ribosome recycling factor, ...
Authors:Gao, N., Zavialov, A.V., Li, W., Sengupta, J., Valle, M., Gursky, R.P., Ehrenberg, M., Frank, J.
Deposit date:2005-05-11
Release date:2005-06-14
Last modified:2018-01-31
Method:ELECTRON MICROSCOPY (14.1 Å)
Cite:Mechanism for the disassembly of the posttermination complex inferred from cryo-EM studies.
Mol.Cell, 18, 2005
4PH8
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CRYSTAL STRUCTURE OF AGGA, THE MAJOR SUBUNIT OF AGGREGATIVE ADHERENCE FIMBRIAE TYPE I (AAF/I) FROM THE ESCHERICHIA COLI O4H104
Descriptor:Aggregative adherence fimbrial subunit AggA, GLYCEROL
Authors:Pakharukova, N.A., Tuitilla, M., Zavialov, A.V.
Deposit date:2014-05-05
Release date:2014-10-01
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural Insight into Host Recognition by Aggregative Adherence Fimbriae of Enteroaggregative Escherichia coli.
Plos Pathog., 10, 2014
6FJY
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CRYSTAL STRUCTURE OF CSUC-CSUE CHAPERONE-TIP ADHESION SUBUNIT PRE-ASSEMBLY COMPLEX FROM ARCHAIC CHAPERONE-USHER CSU PILI OF ACINETOBACTER BAUMANNII
Descriptor:CsuC, Protein CsuE
Authors:Pakharukova, N.A., Tuitilla, M., Paavilainen, S., Zavialov, A.V.
Deposit date:2018-01-23
Release date:2018-05-16
Last modified:2018-09-19
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis forAcinetobacter baumanniibiofilm formation.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1MI6
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DOCKING OF THE MODIFIED RF2 X-RAY STRUCTURE INTO THE LOW RESOLUTION CRYO-EM MAP OF RF2 E.COLI 70S RIBOSOME
Descriptor:peptide chain release factor RF-2
Authors:Rawat, U.B.S., Zavialov, A.V., Sengupta, J., Valle, M., Grassucci, R.A., Linde, J., Vestergaard, B., Ehrenberg, M., Frank, J.
Deposit date:2002-08-22
Release date:2003-01-14
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (10.9 Å)
Cite:A cryo-electron microscopic study of ribosome-bound termination factor RF2
Nature, 421, 2003
1ML5
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STRUCTURE OF THE E. COLI RIBOSOMAL TERMINATION COMPLEX WITH RELEASE FACTOR 2
Descriptor:30S 16S RIBOSOMAL RNA, T-RNA(PHE), A- AND P-SITE MESSENGER RNA CODONS, ...
Authors:Klaholz, B.P., Pape, T., Zavialov, A.V., Myasnikov, A.G., Orlova, E.V., Vestergaard, B., Ehrenberg, M., van Heel, M.
Deposit date:2002-08-30
Release date:2003-01-14
Last modified:2011-07-13
Method:ELECTRON MICROSCOPY (14 Å)
Cite:Structure of the Escherichia coli ribosomal termination complex with release factor 2
Nature, 421, 2003
1MVR
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DECODING CENTER & PEPTIDYL TRANSFERASE CENTER FROM THE X-RAY STRUCTURE OF THE THERMUS THERMOPHILUS 70S RIBOSOME, ALIGNED TO THE LOW RESOLUTION CRYO-EM MAP OF E.COLI 70S RIBOSOME
Descriptor:mRNA, triplet codon (A-site), Helix 34 of 16S rRNA, ...
Authors:Rawat, U.B., Zavialov, A.V., Sengupta, J., Valle, M., Grassucci, R.A., Linde, J., Vestergaard, B., Ehrenberg, M., Frank, J.
Deposit date:2002-09-26
Release date:2003-04-01
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (12.8 Å)
Cite:A cryo-electron microscopic study of ribosome-bound termination factor RF2
Nature, 421, 2003
2MPV
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STRUCTURAL INSIGHT INTO HOST RECOGNITION AND BIOFILM FORMATION BY AGGREGATIVE ADHERENCE FIMBRIAE OF ENTEROAGGREGATIVE ESHERICHIA COLI
Descriptor:Major fimbrial subunit of aggregative adherence fimbria II AafA
Authors:Matthews, S.J., Yang, Y., Berry, A.A., Pakharukova, N., Garnett, J.A., Lee, W., Cota, E., Liu, B., Roy, S., Tuittila, M., Marchant, J., Inman, K.G., Ruiz-Perez, F., Mandomando, I., Nataro, J.P., Zavialov, A.V.
Deposit date:2014-06-04
Release date:2014-10-29
Method:SOLUTION NMR
Cite:Structural insight into host recognition by aggregative adherence fimbriae of enteroaggregative Escherichia coli.
Plos Pathog., 10, 2014
3DOS
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CRYSTAL STRUCTURE OF THE COMPLEX OF THE CAF1M CHAPERONE WITH THE MINI-FIBER OF TWO CAF1 SUBUNITS (CAF1:CAF1), CARRYING THE THR7PHE AND ALA9VAL MUTATIONS IN THE GD DONOR STRAND
Descriptor:Chaperone protein caf1M, F1 capsule antigen
Authors:Fooks, L.J., Yu, X., Moslehi-Mohebi, E., Tischenko, V., Knight, S.D., MacIntyre, S., Zavialov, A.V.
Deposit date:2008-07-06
Release date:2009-07-14
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Hydrophobicity and rigidity of binding segments enable CAF1M chaperone to act as assembly catalyst
TO BE PUBLISHED
3DPB
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CRYSTAL STRUCTURE OF THE COMPLEX OF THE CAF1M CHAPERONE WITH THE MINI-FIBER OF TWO CAF1 SUBUNITS (CAF1:CAF1), CARRYING THE ALA9VAL, ALA11VAL, AND LEU13VAL MUTATIONS IN THE GD DONOR STRAND
Descriptor:Chaperone protein caf1M, F1 capsule antigen
Authors:Fooks, L.J., Yu, X., Moslehi-Mohebi, E., Tischenko, V., Knight, S.D., MacIntyre, S., Zavialov, A.V.
Deposit date:2008-07-07
Release date:2009-07-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Hydrophobicity and rigidity of binding segments enable CAF1M chaperone to act as assembly catalyst
To be published
3DSN
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CRYSTAL STRUCTURE OF THE COMPLEX OF THE CAF1M CHAPERONE WITH THE MINI-FIBER OF TWO CAF1 SUBUNITS (CAF1:CAF1), CARRYING THE THR7PHE MUTATION IN THE GD DONOR STRAND
Descriptor:Chaperone protein caf1M, F1 capsule antigen
Authors:Fooks, L.J., Yu, X., Moslehi-Mohebi, E., Tischenko, V., Knight, S.D., MacIntyre, S., Zavialov, A.V.
Deposit date:2008-07-13
Release date:2009-07-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Hydrophobicity and rigidity of binding segments enable CAF1M chaperone to act as assembly catalyst
To be Published
3FCG
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CRYSTAL STRUCTURE ANALYSIS OF THE MIDDLE DOMAIN OF THE CAF1A USHER
Descriptor:F1 capsule-anchoring protein, CHLORIDE ION
Authors:Yu, X., Visweswaran, G.R., Duck, Z., Marupakula, S., MacIntyre, S., Knight, S., Zavialov, A.V.
Deposit date:2008-11-21
Release date:2008-12-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Caf1A usher possesses a Caf1 subunit-like domain that is crucial for Caf1 fibre secretion
Biochem.J., 418, 2009
4AY0
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HIGH RESOLUTION CRYSTAL STRUCTURE OF THE MONOMERIC SUBUNIT-FREE CAF1M CHAPERONE
Descriptor:CHAPERONE PROTEIN CAF1M
Authors:Yu, X.D., Dubnovitsky, A., Pudney, A.F., MacIntyre, S., Knight, S.D., Zavialov, A.V.
Deposit date:2012-06-16
Release date:2012-09-26
Last modified:2012-11-21
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Allosteric Mechanism Controls Traffic in the Chaperone/Usher Pathway.
Structure, 20, 2012
4AYF
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CRYSTAL STRUCTURE OF THE COMPLEX OF THE CAF1M:CAF1 CHAPERONE:SUBUNIT PREASSEMBLY COMPLEX CARRYING THE TYR40ALA MUTATION IN THE CAF1M CHAPERONE
Descriptor:CHAPERONE PROTEIN CAF1M, F1 CAPSULE ANTIGEN
Authors:Yu, X.D., Dubnovitsky, A., Pudney, A.F., MacIntyre, S., Knight, S.D., Zavialov, A.V.
Deposit date:2012-06-20
Release date:2012-09-26
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Allosteric Mechanism Controls Traffic in the Chaperone/Usher Pathway.
Structure, 20, 2012
4AZ8
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CRYSTAL STRUCTURE OF THE COMPLEX OF THE CAF1M:CAF1 CHAPERONE:SUBUNIT PREASSEMBLY COMPLEX CARRYING THE KDKDTN INSERTION AT THE F1G1 LOOP REGION
Descriptor:CHAPERONE PROTEIN CAF1M, F1 CAPSULE ANTIGEN
Authors:Yu, X.D., Dubnovitsky, A., Pudney, A.F., MacIntyre, S., Knight, S.D., Zavialov, A.V.
Deposit date:2012-06-24
Release date:2012-09-26
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Allosteric Mechanism Controls Traffic in the Chaperone/Usher Pathway.
Structure, 20, 2012
4B0E
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CRYSTAL STRUCTURE OF THE CAF1A USHER PROTEIN N-TERMINAL DOMAIN FROM YERSINIA PESTIS
Descriptor:F1 CAPSULE-ANCHORING PROTEIN
Authors:Dubnovitsky, A., Yu, X.D., Pudney, A.F., MacIntyre, S., Knight, S.D., Zavialov, A.V.
Deposit date:2012-07-02
Release date:2012-09-26
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Allosteric Mechanism Controls Traffic in the Chaperone/Usher Pathway.
Structure, 20, 2012
4B0M
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COMPLEX OF THE CAF1AN USHER DOMAIN, CAF1M CHAPERONE AND CAF1 SUBUNIT FROM YERSINIA PESTIS
Descriptor:F1 CAPSULE-ANCHORING PROTEIN, F1 CAPSULE ANTIGEN, CHAPERONE PROTEIN CAF1M
Authors:Dubnovitsky, A., Yu, X.D., Pudney, A.F., MacIntyre, S., Knight, S.D., Zavialov, A.V.
Deposit date:2012-07-03
Release date:2012-09-26
Last modified:2019-05-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Allosteric Mechanism Controls Traffic in the Chaperone/Usher Pathway.
Structure, 20, 2012
4B9G
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STRUCTURE OF CSSB SUBUNIT COMPLEMENTED WITH DONOR STRAND FROM CSSA SUBUNIT OF ENTEROTOXIGENIC ESCHERICHIA COLI COLONIZATION FACTOR CS6
Descriptor:CS6 FIMBRIAL SUBUNIT B, CS6 FIMBRIAL SUBUNIT A
Authors:Roy, S.P., Rahman, M.M., Yu, X.D., Tuittila, M., Knight, S.D., Zavialov, A.V.
Deposit date:2012-09-04
Release date:2012-11-07
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Crystal Structure of Enterotoxigenic Escherichia Coli Colonization Factor Cs6 Reveals a Novel Type of Functional Assembly.
Mol.Microbiol., 86, 2012
4B9I
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STRUCTURE OF CSSA SUBUNIT COMPLEMENTED WITH DONOR STRAND FROM CSSB SUBUNIT OF ENTEROTOXIGENIC ESCHERICHIA COLI COLONIZATION FACTOR CS6
Descriptor:CS6 FIMBRIAL SUBUNIT A, CS6 FIMBRIAL SUBUNIT B
Authors:Roy, S.P., Rahman, M.M., Yu, X.D., Tuittila, M., Knight, S.D., Zavialov, A.V.
Deposit date:2012-09-04
Release date:2012-11-07
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure of Enterotoxigenic Escherichia Coli Colonization Factor Cs6 Reveals a Novel Type of Functional Assembly.
Mol.Microbiol., 86, 2012
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