Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2OBL
DownloadVisualize
BU of 2obl by Molmil
Structural and biochemical analysis of a prototypical ATPase from the type III secretion system of pathogenic bacteria
Descriptor: ACETATE ION, CALCIUM ION, EscN, ...
Authors:Zarivach, R, Vuckovic, M, Deng, W, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2006-12-19
Release date:2007-01-30
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural analysis of a prototypical ATPase from the type III secretion system.
Nat.Struct.Mol.Biol., 14, 2007
2OBM
DownloadVisualize
BU of 2obm by Molmil
Structural and biochemical analysis of a prototypical ATPase from the type III secretion system of pathogenic bacteria
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CALCIUM ION, EscN
Authors:Zarivach, R, Vuckovic, M, Deng, W, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2006-12-19
Release date:2007-01-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural analysis of a prototypical ATPase from the type III secretion system.
Nat.Struct.Mol.Biol., 14, 2007
3C00
DownloadVisualize
BU of 3c00 by Molmil
Crystal structural of the mutated G247T EscU/SpaS C-terminal domain
Descriptor: EscU
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3BZT
DownloadVisualize
BU of 3bzt by Molmil
Crystal structural of the mutated P263A EscU C-terminal domain
Descriptor: EscU
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3C03
DownloadVisualize
BU of 3c03 by Molmil
Crystal structure of the EscU C-terminal domain with P263A mutation,space group P 1 21 1
Descriptor: EscU, PROLINE
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3BZL
DownloadVisualize
BU of 3bzl by Molmil
Crystal structural of native EscU C-terminal domain
Descriptor: EscU, FORMIC ACID, SODIUM ION
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3BZX
DownloadVisualize
BU of 3bzx by Molmil
Crystal structure of the mutated H265A EscU C-terminal domain
Descriptor: EscU, SULFATE ION
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3C01
DownloadVisualize
BU of 3c01 by Molmil
Crystal structural of native SpaS C-terminal domain
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CYSTEINE, SULFATE ION, ...
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3BZZ
DownloadVisualize
BU of 3bzz by Molmil
Crystal structural of the mutated R313T EscU/SpaS C-terminal domain
Descriptor: EscU
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.407 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3BZO
DownloadVisualize
BU of 3bzo by Molmil
Crystal structural of native EscU C-terminal domain
Descriptor: EscU, SULFATE ION
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3BZV
DownloadVisualize
BU of 3bzv by Molmil
Crystal structural of the mutated T264A EscU C-terminal domain
Descriptor: EscU
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3BZS
DownloadVisualize
BU of 3bzs by Molmil
Crystal structure of EscU C-terminal domain with N262D mutation, Space group P 21 21 21
Descriptor: EscU
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3BZP
DownloadVisualize
BU of 3bzp by Molmil
Crystal structural of the mutated N262A EscU C-terminal domain
Descriptor: EscU
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.499 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3BZR
DownloadVisualize
BU of 3bzr by Molmil
Crystal structure of EscU C-terminal domain with N262D mutation, Space group P 41 21 2
Descriptor: EscU
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.646 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3BZY
DownloadVisualize
BU of 3bzy by Molmil
Crystal structure of the mutated Y316D EscU C-terminal domain
Descriptor: EscU, SULFATE ION
Authors:Zarivach, R, Deng, W, Vuckovic, M, Felise, H.B, Nguyen, H.V, Miller, S.I, Finlay, B.B, Strynadka, N.C.J.
Deposit date:2008-01-18
Release date:2008-04-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural analysis of the essential self-cleaving type III secretion proteins EscU and SpaS.
Nature, 453, 2008
3WNW
DownloadVisualize
BU of 3wnw by Molmil
Structure of Mouse H-chain modified ferritin
Descriptor: FE (III) ION, Ferritin heavy chain, GLYCEROL, ...
Authors:Zarivach, R, Lewin, L.
Deposit date:2013-12-17
Release date:2015-01-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Studies of ferritin-M6A
To be Published
4Z29
DownloadVisualize
BU of 4z29 by Molmil
Crystal structure of the magnetobacterial protein MtxA C-terminal domain
Descriptor: Magnetotaxis protein MtxA
Authors:Zarivach, R, Davidov, G.
Deposit date:2015-03-29
Release date:2015-06-03
Last modified:2015-06-24
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure of the magnetobacterial protein MtxA C-terminal domain reveals a new sequence-structure relationship.
Front Mol Biosci, 2, 2015
5LFM
DownloadVisualize
BU of 5lfm by Molmil
MamA RS-1 ArsTM double mutant
Descriptor: ACETATE ION, CHLORIDE ION, Magnetosome protein MamA
Authors:Zarivach, R, Cronin, S.L.
Deposit date:2016-07-03
Release date:2017-08-02
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (3.28 Å)
Cite:Differing self-assembling protein nanostructures in soluble and crystal form reveal dynamic behaviour
To Be Published
5LFL
DownloadVisualize
BU of 5lfl by Molmil
MamA RS-1 ArsTM double mutant
Descriptor: CHLORIDE ION, Magnetosome protein MamA
Authors:Zarivach, R, Cronin, S.L.
Deposit date:2016-07-03
Release date:2017-08-02
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (3.37 Å)
Cite:Differing self-assembling protein nanostructures in soluble and crystal form reveal dynamic behaviour
To Be Published
4XI0
DownloadVisualize
BU of 4xi0 by Molmil
MamA 41-end from Desulfovibrio magneticus RS-1
Descriptor: Magnetosome protein MamA
Authors:Zarivach, R, Zeytuni, N, Cronin, S, Davidov, G, Baran, D, Stein, T.
Deposit date:2015-01-06
Release date:2015-08-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:MamA as a Model Protein for Structure-Based Insight into the Evolutionary Origins of Magnetotactic Bacteria.
Plos One, 10, 2015
7OCK
DownloadVisualize
BU of 7ock by Molmil
MAT in complex with SAMH
Descriptor: S-adenosylmethionine synthase, SAM hydrolase
Authors:Simon, H, Kleiner, D, Shmulevich, F, Zarivach, R, Zalk, R, Tang, H, Ding, F, Bershtein, S.
Deposit date:2021-04-27
Release date:2021-07-21
Last modified:2021-10-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:SAMase of Bacteriophage T3 Inactivates Escherichia coli's Methionine S -Adenosyltransferase by Forming Heteropolymers.
Mbio, 12, 2021
5HO3
DownloadVisualize
BU of 5ho3 by Molmil
MamB
Descriptor: Magnetosome protein MamB
Authors:Zeytuni, N, Keren, N, Davidov, G, Zarivach, R.
Deposit date:2016-01-19
Release date:2017-02-01
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The dual role of MamB in magnetosome membrane assembly and magnetite biomineralization.
Mol. Microbiol., 107, 2018
6AEZ
DownloadVisualize
BU of 6aez by Molmil
Crystal structure of human CCL5 trimer
Descriptor: C-C motif chemokine 5, SULFATE ION
Authors:Chen, Y.C, Li, K.M, Chen, P.J, Zarivach, R, Sun, Y.J, Sue, S.C.
Deposit date:2018-08-07
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Integrative Model to Coordinate the Oligomerization and Aggregation Mechanisms of CCL5.
J.Mol.Biol., 432, 2020
6QHD
DownloadVisualize
BU of 6qhd by Molmil
Lysine acetylated and tyrosine phosphorylated STAT3 in a complex with DNA
Descriptor: DNA (5'-D(*AP*AP*GP*AP*TP*TP*TP*AP*CP*GP*GP*GP*AP*AP*AP*TP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*AP*TP*TP*TP*CP*CP*CP*GP*TP*AP*AP*AP*TP*CP*T)-3'), Signal transducer and activator of transcription 3
Authors:Arbely, E, Belo, Y, Shahar, A, Zarivach, R.
Deposit date:2019-01-16
Release date:2019-06-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Unexpected implications of STAT3 acetylation revealed by genetic encoding of acetyl-lysine.
Biochim Biophys Acta Gen Subj, 1863, 2019
6ZH5
DownloadVisualize
BU of 6zh5 by Molmil
Folding of an iron binding peptide in response to sedimentation is resolved using ferritin as a nano-reactor
Descriptor: FE (III) ION, Ferritin
Authors:Davidov, G, Abelya, G, Zalk, R, Izbicki, B, Shaibi, S, Spektor, L, Meyron Holtz, E.G, Zarivach, R, Frank, G.A.
Deposit date:2020-06-21
Release date:2021-04-28
Last modified:2022-02-02
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Folding of an Intrinsically Disordered Iron-Binding Peptide in Response to Sedimentation Revealed by Cryo-EM.
J.Am.Chem.Soc., 142, 2020

217157

PDB entries from 2024-03-13

PDB statisticsPDBj update infoContact PDBjnumon