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6MS3
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BU of 6ms3 by Molmil
Crystal structure of the GH43 protein BlXynB mutant (K247S) from Bacillus licheniformis
Descriptor: CALCIUM ION, GLYCEROL, Glycoside Hydrolase Family 43, ...
Authors:Zanphorlin, L.M, Morais, M.A.B, Diogo, J.A, Murakami, M.T.
Deposit date:2018-10-16
Release date:2019-04-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43.
Biotechnol. Bioeng., 116, 2019
6MS2
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BU of 6ms2 by Molmil
Crystal structure of the GH43 BlXynB protein from Bacillus licheniformis
Descriptor: CALCIUM ION, Glycoside Hydrolase Family 43
Authors:Zanphorlin, L.M, Morais, M.A.B, Diogo, J.A, Murakami, M.T.
Deposit date:2018-10-16
Release date:2019-04-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.494 Å)
Cite:Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43.
Biotechnol. Bioeng., 116, 2019
5DT5
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BU of 5dt5 by Molmil
Crystal structure of the GH1 beta-glucosidase from Exiguobacterium antarcticum B7 in space group P21
Descriptor: Beta-glucosidase, SULFATE ION
Authors:Zanphorlin, L.M, Giuseppe, P.O, Tonoli, C.C.C, Murakami, M.T.
Deposit date:2015-09-17
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Oligomerization as a strategy for cold adaptation: Structure and dynamics of the GH1 beta-glucosidase from Exiguobacterium antarcticum B7.
Sci Rep, 6, 2016
5DT7
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BU of 5dt7 by Molmil
Crystal structure of the GH1 beta-glucosidase from Exiguobacterium antarcticum B7 in space group C2221
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Beta-glucosidase, GLYCEROL, ...
Authors:Zanphorlin, L.M, Giuseppe, P.O, Tonoli, C.C.C, Murakami, M.T.
Deposit date:2015-09-17
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Oligomerization as a strategy for cold adaptation: Structure and dynamics of the GH1 beta-glucosidase from Exiguobacterium antarcticum B7.
Sci Rep, 6, 2016
6WIU
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BU of 6wiu by Molmil
Crystal structure of a beta-glucosidase from Exiguobacterium marinum
Descriptor: Beta-glucosidase
Authors:Zanphorlin, L.M, Morais, M.A.B, Murakami, M.T.
Deposit date:2020-04-10
Release date:2020-08-26
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.511 Å)
Cite:A rationally identified marine GH1 beta-glucosidase has distinguishing functional features for simultaneous saccharification and fermentation
Biofuels, Bioprod Bioref, 2020
8D8P
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BU of 8d8p by Molmil
Crystal structure of a novel fatty acid decarboxylase from Rothia nasimurium
Descriptor: Decarboxylase, PALMITIC ACID, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Vieira, P.S, Murakami, M.T, Zanphorlin, L.M.
Deposit date:2022-06-08
Release date:2023-05-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of a novel fatty acid decarboxylase from Rothia nasimurium
Proc.Natl.Acad.Sci.USA, 2023
6UNV
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BU of 6unv by Molmil
Crystal structure of a methanol tolerant lipase/esterase from the fungus Rasamsonia emersonii
Descriptor: Lipase
Authors:Vieira, P.S, Milan, N, Murakami, M.T, Zanphorlin, L.M.
Deposit date:2019-10-13
Release date:2020-06-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3 Å)
Cite:A Novel Fungal Lipase With Methanol Tolerance and Preference for Macaw Palm Oil.
Front Bioeng Biotechnol, 8, 2020
4GSO
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BU of 4gso by Molmil
structure of Jararacussin-I
Descriptor: Thrombin-like enzyme BjussuSP-1
Authors:Ullah, A, Souza, T.C.A.B, Zanphorlin, L.M, Mariutti, R, Sanata, S.V, Murakami, M.T, Arni, R.K.
Deposit date:2012-08-28
Release date:2012-12-12
Last modified:2013-01-02
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Jararacussin-I: The highly negatively charged catalytic interface contributes to macromolecular selectivity in snake venom thrombin-like enzymes.
Protein Sci., 22, 2013
5WKA
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BU of 5wka by Molmil
Crystal structure of a GH1 beta-glucosidase retrieved from microbial metagenome of Poraque Amazon lake
Descriptor: Beta-glucosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL
Authors:Morais, M.A.B, Toyama, D, Ramos, F.C, Zanphorlin, L.M, Tonoli, C.C.C, Miranda, F.P, Ruller, R, Henrique-Silva, F, Murakami, M.T.
Deposit date:2017-07-24
Release date:2018-03-07
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:A novel beta-glucosidase isolated from the microbial metagenome of Lake Poraque (Amazon, Brazil).
Biochim. Biophys. Acta, 1866, 2018
6N99
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BU of 6n99 by Molmil
Xylose isomerase 2F1 variant from Streptomyces sp. F-1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, MAGNESIUM ION, SULFATE ION, ...
Authors:Miyamoto, R.Y, Vieira, P.S, Murakami, M.T, Zanphorlin, L.M.
Deposit date:2018-12-01
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a novel xylose isomerase from Streptomyces sp. F-1 revealed the presence of unique features that differ from conventional classes.
Biochim Biophys Acta Gen Subj, 1864, 2020
6N98
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BU of 6n98 by Molmil
Xylose isomerase 1F1 variant from Streptomyces sp. F-1
Descriptor: MAGNESIUM ION, SULFATE ION, Xylose isomerase
Authors:Miyamoto, R.Y, Vieira, P.S, Murakami, M.T, Zanphorlin, L.M.
Deposit date:2018-12-01
Release date:2019-12-04
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of a novel xylose isomerase from Streptomyces sp. F-1 revealed the presence of unique features that differ from conventional classes.
Biochim Biophys Acta Gen Subj, 1864, 2020
5BWF
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BU of 5bwf by Molmil
Crystal structure of the beta-glucosidase from Trichoderma harzianum
Descriptor: Beta-1,4-glucosidase, GLYCEROL, SULFATE ION
Authors:Santos, C.A, Zanphorlin, L.M, Crucello, A, Tonoli, C.C.C, Ruller, R, Souza, A.P, Murakami, M.T.
Deposit date:2015-06-07
Release date:2016-07-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the beta-glucosidase from Trichoderma harzianum
To Be Published
5C2Z
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BU of 5c2z by Molmil
Molecular insights into the specificity of exfoliative toxins from Staphylococcus aureus
Descriptor: Exfoliative toxin D2
Authors:Mariutti, R.B, Souza, T.A.C.B, Ullah, A, Zanphorlin, L.M, Murakami, M.T, Arni, R.K.
Deposit date:2015-06-16
Release date:2016-04-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.9553 Å)
Cite:Crystal structure of Staphylococcus aureus exfoliative toxin D-like protein: Structural basis for the high specificity of exfoliative toxins.
Biochem.Biophys.Res.Commun., 467, 2015
5CZL
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BU of 5czl by Molmil
Crystal structure of a novel GH8 endo-beta-1,4-glucanase from an Achatina fulica gut metagenomic library
Descriptor: Glucanase, PHOSPHATE ION
Authors:Scapin, S.M.N, Souza, F.H.M, Zanphorlin, L.M, Almeida, T.S, Sade, Y.B, Cardoso, A.M, Pinheiro, G.L, Murakami, M.T.
Deposit date:2015-07-31
Release date:2016-08-03
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.391 Å)
Cite:Crystal structure of a novel GH8 endo-beta-1,4-glucanase from an Achatina fulica gut metagenomic library
To Be Published
4MDO
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BU of 4mdo by Molmil
Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucosidase, DI(HYDROXYETHYL)ETHER, ...
Authors:Giuseppe, P.O, Souza, T.A.C.B, Souza, F.H.M, Zanphorlin, L.M, Machado, C.B, Ward, R.J, Jorge, J.A, Furriel, R.P.M, Murakami, M.T.
Deposit date:2013-08-23
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for glucose tolerance in GH1 beta-glucosidases.
Acta Crystallogr.,Sect.D, 70, 2014
4MDP
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BU of 4mdp by Molmil
Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens in complex with glucose
Descriptor: Beta-glucosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Giuseppe, P.O, Souza, T.A.C.B, Souza, F.H.M, Zanphorlin, L.M, Machado, C.B, Ward, R.J, Jorge, J.A, Furriel, R.P.M, Murakami, M.T.
Deposit date:2013-08-23
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for glucose tolerance in GH1 beta-glucosidases.
Acta Crystallogr.,Sect.D, 70, 2014
4PN2
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BU of 4pn2 by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylotriose
Descriptor: CALCIUM ION, Xylanase, beta-D-xylopyranose
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMY
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BU of 4pmy by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylose
Descriptor: CALCIUM ION, GLYCEROL, Xylanase, ...
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMX
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BU of 4pmx by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri in the native form
Descriptor: CALCIUM ION, Xylanase
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.304 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMV
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BU of 4pmv by Molmil
Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P43212)
Descriptor: Endo-1,4-beta-xylanase A
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMU
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BU of 4pmu by Molmil
Crystal structure of a novel reducing-end xylose-releasing exo-oligoxylanase (XynA) belonging to GH10 family (space group P1211)
Descriptor: Endo-1,4-beta-xylanase A
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.857 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
4PMZ
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BU of 4pmz by Molmil
Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylobiose
Descriptor: CALCIUM ION, Xylanase, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose
Authors:Santos, C.R, Martins, V.P.M, Zanphorlin, L.M, Ruller, R, Murakami, M.T.
Deposit date:2014-05-22
Release date:2014-10-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.401 Å)
Cite:Molecular mechanisms associated with xylan degradation by xanthomonas plant pathogens.
J.Biol.Chem., 289, 2014
6D25
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BU of 6d25 by Molmil
Crystal structure of the GH51 arabinofuranosidase from Xanthomonas axonopodis pv. citri
Descriptor: Alpha-L-arabinosidase, GLYCEROL
Authors:Santos, C.R, Morais, M.A.B, Tonoli, C.C.C, Giuseppe, P.O, Murakami, M.T.
Deposit date:2018-04-13
Release date:2019-02-20
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:The mechanism by which a distinguishing arabinofuranosidase can cope with internal di-substitutions in arabinoxylans.
Biotechnol Biofuels, 11, 2018
5KLE
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BU of 5kle by Molmil
Structure of CBM_E1, a novel carbohydrate-binding module found by sugar cane soil metagenome, complexed with cellopentaose
Descriptor: Carbohydrate binding module E1, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
Authors:Liberato, M.V, Campos, B.M, Zeri, A.C.M, Squina, F.M.
Deposit date:2016-06-24
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties.
J.Biol.Chem., 291, 2016
5KLC
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BU of 5klc by Molmil
Structure of CBM_E1, a novel carbohydrate-binding module found by sugar cane soil metagenome
Descriptor: Carbohydrate binding module E1
Authors:Liberato, M.V, Campos, B.M, Zeri, A.C.M, Squina, F.M.
Deposit date:2016-06-24
Release date:2016-09-21
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.746 Å)
Cite:A Novel Carbohydrate-binding Module from Sugar Cane Soil Metagenome Featuring Unique Structural and Carbohydrate Affinity Properties.
J.Biol.Chem., 291, 2016

 

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