Author results

1MV5
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CRYSTAL STRUCTURE OF LMRA ATP-BINDING DOMAIN
Descriptor:Multidrug resistance ABC transporter ATP-binding and permease protein, ADENOSINE-5'-TRIPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Yuan, Y., Chen, H., Patel, D.
Deposit date:2002-09-24
Release date:2003-12-02
Last modified:2019-07-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structure of LmrA ATP-binding domain reveals the two-site alternating mechanism at molecular level
To be Published
1OSW
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THE STEM OF SL1 RNA IN HIV-1: STRUCTURE AND NUCLEOCAPSID PROTEIN BINDING FOR A 1X3 INTERNAL LOOP
Descriptor:5'-R(*GP*GP*AP*GP*GP*CP*GP*CP*UP*AP*CP*GP*GP*CP*GP*AP*GP*GP*CP*UP*CP*CP*A)-3'
Authors:Yuan, Y., Kerwood, D.J., Paoletti, A.C., Shubsda, M.F., Borer, P.N.
Deposit date:2003-03-20
Release date:2003-05-20
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Stem of SL1 RNA in HIV-1: Structure and Nucleocapsid Protein Binding for a 1X3 Internal Loop
Biochemistry, 42, 2003
2MYZ
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THE SOLUTION STRUCTURE OF THE MAGNESIUM-BOUND CONANTOKIN-R1B MUTANT
Descriptor:Conantokin-R1-B
Authors:Kunda, S., Yuan, Y., Balsara, R.D., Zajicek, J., Castellino, F.J.
Deposit date:2015-02-04
Release date:2015-06-17
Last modified:2015-08-05
Method:SOLUTION NMR
Cite:Hydroxyproline-induced Helical Disruption in Conantokin Rl-B Affects Subunit-selective Antagonistic Activities toward Ion Channels of N-Methyl-d-aspartate Receptors.
J.Biol.Chem., 290, 2015
2MZK
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THE SOLUTION STRUCTURE OF THE MAGNESIUM-BOUND CONANTOKIN RLB
Descriptor:Conantokin-R1-B
Authors:Kunda, S., Yuan, Y., Balsara, R.D., Zajicek, J., Castellino, F.J.
Deposit date:2015-02-14
Release date:2015-06-17
Last modified:2015-08-05
Method:SOLUTION NMR
Cite:Hydroxyproline-induced Helical Disruption in Conantokin Rl-B Affects Subunit-selective Antagonistic Activities toward Ion Channels of N-Methyl-d-aspartate Receptors.
J.Biol.Chem., 290, 2015
2MZL
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THE SOLUTION STRUCTURE OF THE MAGNESIUM-BOUND CONANTOKIN-G MUTANT
Descriptor:Conantokin-R1-B
Authors:Kunda, S., Yuan, Y., Balsara, R.D., Zajicek, J., Castellino, F.J.
Deposit date:2015-02-14
Release date:2015-06-17
Last modified:2015-08-05
Method:SOLUTION NMR
Cite:Hydroxyproline-induced Helical Disruption in Conantokin Rl-B Affects Subunit-selective Antagonistic Activities toward Ion Channels of N-Methyl-d-aspartate Receptors.
J.Biol.Chem., 290, 2015
2MZM
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THE SOLUTION STRUCTURE OF THE MAGNESIUM-BOUND CONANTOKIN-G
Descriptor:Conantokin-R1-B
Authors:Kunda, S., Yuan, Y., Balsara, R.D., Zajicek, J., Castellino, F.J.
Deposit date:2015-02-14
Release date:2015-06-17
Last modified:2015-08-05
Method:SOLUTION NMR
Cite:Hydroxyproline-induced Helical Disruption in Conantokin Rl-B Affects Subunit-selective Antagonistic Activities toward Ion Channels of N-Methyl-d-aspartate Receptors.
J.Biol.Chem., 290, 2015
2OQO
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CRYSTAL STRUCTURE OF A PEPTIDOGLYCAN GLYCOSYLTRANSFERASE FROM A CLASS A PBP: INSIGHT INTO BACTERIAL CELL WALL SYNTHESIS
Descriptor:Penicillin-binding protein 1A (PBP-1a) (PBP1a), 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE
Authors:Yuan, Y., Sliz, P., Walker, S.
Deposit date:2007-01-31
Release date:2007-03-13
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a peptidoglycan glycosyltransferase suggests a model for processive glycan chain synthesis.
Proc.Natl.Acad.Sci.Usa, 104, 2007
2YKR
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30S RIBOSOMAL SUBUNIT WITH RSGA BOUND IN THE PRESENCE OF GMPPNP
Descriptor:16S RRNA, 30S RIBOSOMAL PROTEIN S2, 30S RIBOSOMAL PROTEIN S3, ...
Authors:Guo, Q., Yuan, Y., Xu, Y., Feng, B., Liu, L., Chen, K., Lei, J., Gao, N.
Deposit date:2011-05-30
Release date:2011-08-24
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (9.8 Å)
Cite:Structural Basis for the Function of a Small Gtpase Rsga on the 30S Ribosomal Subunit Maturation Revealed by Cryoelectron Microscopy.
Proc.Natl.Acad.Sci.USA, 108, 2011
3AWD
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CRYSTAL STRUCTURE OF GOX2181
Descriptor:Putative polyol dehydrogenase, MAGNESIUM ION, CADMIUM ION
Authors:Adam Yuan, Y., Yuan, Z.
Deposit date:2011-03-18
Release date:2012-02-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Biochemical and structural analysis of Gox2181, a new member of the SDR superfamily from Gluconobacter oxydans.
Biochem.Biophys.Res.Commun., 415, 2011
3D3H
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CRYSTAL STRUCTURE OF A COMPLEX OF THE PEPTIDOGLYCAN GLYCOSYLTRANSFERASE DOMAIN FROM AQUIFEX AEOLICUS AND NERYL MOENOMYCIN A
Descriptor:Penicillin-insensitive transglycosylase, (2R)-3-{[(S)-{[(2R,3R,4R,5S,6S)-3-{[(2S,3R,4R,5S,6R)-3-(acetylamino)-5-{[(2S,3R,4R,5S,6R)-3-(acetylamino)-5-{[(2R,3R,4S,5R,6S)-6-carbamoyl-3,4,5-trihydroxytetrahydro-2H-pyran-2-yl]oxy}-4-hydroxy-6-methyltetrahydro-2H-pyran-2-yl]oxy}-4-hydroxy-6-({[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl]oxy}methyl)tetrahydro-2H-pyran-2-yl]oxy}-6-carbamoyl-4-(carbamoyloxy)-5-hydroxy-5-methyltetrahydro-2H-pyran-2-yl]oxy}(hydroxy)phosphoryl]oxy}-2-{[(2Z)-3,7-dimethylocta-2,6-dien-1-yl]oxy}propanoic acid
Authors:Yuan, Y., Sliz, P., Walker, S.
Deposit date:2008-05-11
Release date:2008-07-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural analysis of the contacts anchoring moenomycin to peptidoglycan glycosyltransferases and implications for antibiotic design.
Acs Chem.Biol., 3, 2008
3J3V
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ATOMIC MODEL OF THE IMMATURE 50S SUBUNIT FROM BACILLUS SUBTILIS (STATE I-A)
Descriptor:50S ribosomal protein L32, 50S ribosomal protein L34, 50S ribosomal protein L1, ...
Authors:Li, N., Guo, Q., Zhang, Y., Yuan, Y., Ma, C., Lei, J., Gao, N.
Deposit date:2013-04-28
Release date:2013-06-12
Last modified:2013-08-28
Method:ELECTRON MICROSCOPY (13.3 Å)
Cite:Cryo-EM structures of the late-stage assembly intermediates of the bacterial 50S ribosomal subunit
Nucleic Acids Res., 41, 2013
3J3W
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ATOMIC MODEL OF THE IMMATURE 50S SUBUNIT FROM BACILLUS SUBTILIS (STATE II-A)
Descriptor:ribosome RNA 23S, 50S ribosomal protein L32, 50S ribosomal protein L2, ...
Authors:Li, N., Guo, Q., Zhang, Y., Yuan, Y., Ma, C., Lei, J., Gao, N.
Deposit date:2013-04-28
Release date:2013-06-12
Last modified:2013-08-28
Method:ELECTRON MICROSCOPY (10.7 Å)
Cite:Cryo-EM structures of the late-stage assembly intermediates of the bacterial 50S ribosomal subunit
Nucleic Acids Res., 41, 2013
3JCT
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CRYO-EM STRUCTURE OF EUKARYOTIC PRE-60S RIBOSOMAL SUBUNITS
Descriptor:60S ribosomal protein L2-A, 60S ribosomal protein L3, 60S ribosomal protein L4-A, ...
Authors:Wu, S., Kumcuoglu, B., Yan, K.G., Brown, H., Zhang, Y.X., Tan, D., Gamalinda, M., Yuan, Y., Li, Z.F., Jakovljevic, J., Ma, C.Y., Lei, J.L., Dong, M.Q., Woolford Jr., J.L., Gao, N.
Deposit date:2016-03-09
Release date:2016-06-01
Last modified:2017-02-01
Method:ELECTRON MICROSCOPY (3.08 Å)
Cite:Diverse roles of assembly factors revealed by structures of late nuclear pre-60S ribosomes
Nature, 534, 2016
3MIL
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CRYSTAL STRUCTURE OF ISOAMYL ACETATE-HYDROLYZING ESTERASE FROM SACCHAROMYCES CEREVISIAE
Descriptor:Isoamyl acetate-hydrolyzing esterase, GLYCEROL
Authors:Ma, J., Lu, Q., Yuan, Y., Li, K., Ge, H., Go, Y., Niu, L., Teng, M.
Deposit date:2010-04-11
Release date:2010-11-24
Last modified:2014-02-19
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of isoamyl acetate-hydrolyzing esterase from Saccharomyces cerevisiae reveals a novel active site architecture and the basis of substrate specificity
Proteins, 79, 2011
3NB6
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CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS PEPTIDOGLYCAN GLYCOSYLTRANSFERASE IN COMPLEX WITH METHYLPHOSPHORYL NERYL MOENOMYCIN
Descriptor:Penicillin-binding protein 1A
Authors:Sliz, P., Yuan, Y., Walker, S., Kahne, D.
Deposit date:2010-06-02
Release date:2011-05-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Functional and structural analysis of a key region of the cell wall inhibitor moenomycin.
Acs Chem.Biol., 5, 2010
3NB7
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CRYSTAL STRUCTURE OF AQUIFEX AEOLICUS PEPTIDOGLYCAN GLYCOSYLTRANSFERASE IN COMPLEX WITH DECARBOXYLATED NERYL MOENOMYCIN
Descriptor:Penicillin-binding protein 1A
Authors:Sliz, P., Yuan, Y., Walker, S.
Deposit date:2010-06-02
Release date:2011-05-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Functional and structural analysis of a key region of the cell wall inhibitor moenomycin.
Acs Chem.Biol., 5, 2010
3WXX
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CRYSTAL STRUCTURE OF A T3SS COMPLEX FROM AEROMONAS HYDROPHILA
Descriptor:AcrH, AopB, MAGNESIUM ION
Authors:Nguyen, V.S., Jobichen, C., Sivaraman, J., Henry, Y.K.M.
Deposit date:2014-08-12
Release date:2015-10-14
Last modified:2015-11-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of AcrH-AopB Chaperone-Translocator Complex Reveals a Role for Membrane Hairpins in Type III Secretion System Translocon Assembly
Structure, 23, 2015
4EAC
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CRYSTAL STRUCTURE OF MANNONATE DEHYDRATASE FROM ESCHERICHIA COLI STRAIN K12
Descriptor:Mannonate dehydratase, CHLORIDE ION, MANGANESE (II) ION
Authors:Qiu, X., Zhu, Y., Yuan, Y., Zhang, Y., Liu, H., Gao, Y., Teng, M., Niu, L.
Deposit date:2012-03-22
Release date:2013-03-27
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insights into decreased enzymatic activity induced by an insert sequence in mannonate dehydratase from Gram negative bacterium.
J.Struct.Biol., 180, 2012
4EAY
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CRYSTAL STRUCTURES OF MANNONATE DEHYDRATASE FROM ESCHERICHIA COLI STRAIN K12 COMPLEXED WITH D-MANNONATE
Descriptor:Mannonate dehydratase, CHLORIDE ION, D-MANNONIC ACID, ...
Authors:Qiu, X., Zhu, Y., Yuan, Y., Zhang, Y., Liu, H., Gao, Y., Teng, M., Niu, L.
Deposit date:2012-03-23
Release date:2013-03-27
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural insights into decreased enzymatic activity induced by an insert sequence in mannonate dehydratase from Gram negative bacterium.
J.Struct.Biol., 180, 2012
4FIN
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CRYSTAL STRUCTURE OF ETTA (FORMERLY YJJK) - AN E. COLI ABC-TYPE ATPASE
Descriptor:EttA (YjjK) ABCF family protein, SULFATE ION, CITRIC ACID, ...
Authors:Smith, P., Yuan, Y., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)
Deposit date:2012-06-09
Release date:2013-07-03
Last modified:2014-03-05
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The ABC-F protein EttA gates ribosome entry into the translation elongation cycle.
Nat.Struct.Mol.Biol., 21, 2014
4FMM
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DIMERIC SEC14 FAMILY HOMOLOG 3 FROM SACCHAROMYCES CEREVISIAE PRESENTS SOME NOVEL FEATURES OF STRUCTURE THAT LEAD TO A SURPRISING "DIMER-MONOMER" STATE CHANGE INDUCED BY SUBSTRATE BINDING
Descriptor:Phosphatidylinositol transfer protein PDR16, GLYCEROL, MAGNESIUM ION
Authors:Yuan, Y., Zhao, W., Wang, X., Gao, Y., Niu, L., Teng, M.
Deposit date:2012-06-18
Release date:2013-02-27
Last modified:2013-06-19
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Dimeric Sfh3 has structural changes in its binding pocket that are associated with a dimer-monomer state transformation induced by substrate binding.
Acta Crystallogr.,Sect.D, 69, 2013
4KQZ
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STRUCTURE OF THE RECEPTOR BINDING DOMAIN (RBD) OF MERS-COV SPIKE
Descriptor:S protein, N-ACETYL-D-GLUCOSAMINE
Authors:Lu, G., Hu, Y., Wang, Q., Qi, J., Gao, F., Li, Y., Zhang, Y., Zhang, W., Yuan, Y., Bao, J., Zhang, B., Shi, Y., Yan, J., Gao, G.F.
Deposit date:2013-05-15
Release date:2013-07-10
Last modified:2013-08-14
Method:X-RAY DIFFRACTION (2.514 Å)
Cite:Molecular basis of binding between novel human coronavirus MERS-CoV and its receptor CD26
Nature, 500, 2013
4KR0
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COMPLEX STRUCTURE OF MERS-COV SPIKE RBD BOUND TO CD26
Descriptor:Dipeptidyl peptidase 4, S protein, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Lu, G., Hu, Y., Wang, Q., Qi, J., Gao, F., Li, Y., Zhang, Y., Zhang, W., Yuan, Y., Zhang, B., Shi, Y., Yan, J., Gao, G.F.
Deposit date:2013-05-15
Release date:2013-07-10
Last modified:2013-08-14
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Molecular basis of binding between novel human coronavirus MERS-CoV and its receptor CD26
Nature, 500, 2013
4QZV
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BAT-DERIVED CORONAVIRUS HKU4 USES MERS-COV RECEPTOR HUMAN CD26 FOR CELL ENTRY
Descriptor:Dipeptidyl peptidase 4, Spike protein S1, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Gao, F.G., Wang, Q.H., Qi, J.X., Lu, G.W.
Deposit date:2014-07-29
Release date:2014-10-29
Method:X-RAY DIFFRACTION (2.592 Å)
Cite:Bat Origins of MERS-CoV Supported by Bat Coronavirus HKU4 Usage of Human Receptor CD26.
Cell Host Microbe, 16, 2014
4XZ7
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CRYSTAL STRUCTURE OF A TGASE
Descriptor:Putative uncharacterized protein
Authors:Yu, J., Ge, J., Yang, M.
Deposit date:2015-02-04
Release date:2015-06-24
Last modified:2015-08-12
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Functional and Structural Characterization of the Antiphagocytic Properties of a Novel Transglutaminase from Streptococcus suis
J.Biol.Chem., 290, 2015
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