Author results

2GKS
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CRYSTAL STRUCTURE OF THE BI-FUNCTIONAL ATP SULFURYLASE-APS KINASE FROM AQUIFEX AEOLICUS, A CHEMOLITHOTROPHIC THERMOPHILE
Descriptor:Bifunctional SAT/APS kinase, ADENOSINE-5'-DIPHOSPHATE
Authors:Yu, Z., MacRea, I.J., Lansdon, E.B., Segel, I.H., Fisher, A.J.
Deposit date:2006-04-03
Release date:2007-03-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystal structure of the bifunctional ATP sulfurylase-APS kinase from the chemolithotrophic thermophile Aquifex aeolicus.
J.Mol.Biol., 365, 2007
2OQ2
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CRYSTAL STRUCTURE OF YEAST PAPS REDUCTASE WITH PAP, A PRODUCT COMPLEX
Descriptor:Phosphoadenosine phosphosulfate reductase, ADENOSINE-3'-5'-DIPHOSPHATE
Authors:Yu, Z., Fisher, A.J.
Deposit date:2007-01-31
Release date:2008-01-15
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of Saccharomyces cerevisiae 3'-phosphoadenosine-5'-phosphosulfate reductase complexed with adenosine 3',5'-bisphosphate.
Biochemistry, 47, 2008
4B10
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PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH A NON-HYDROLYSABLE CO- FACTOR
Descriptor:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, 2-oxopentadecyl-CoA, DIMETHYL SULFOXIDE, ...
Authors:Yu, Z., Brannigan, J.A., Moss, D.K., Brzozowski, A.M., Wilkinson, A.J., Holder, A.A., Tate, E.W., Leatherbarrow, R.J.
Deposit date:2012-07-06
Release date:2012-10-17
Last modified:2012-11-07
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Design and Synthesis of Inhibitors of Plasmodium Falciparum N-Myristoyltransferase, a Promising Target for Anti-Malarial Drug Discovery.
J.Med.Chem., 55, 2012
4B11
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PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH A BOUND BENZOFURAN INHIBITOR (COMPOUND 13)
Descriptor:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, 3-methyl-N-(naphthalen-1-ylmethyl)-4-piperidin-4-yloxy-1-benzofuran-2-carboxamide, 2-oxopentadecyl-CoA, ...
Authors:Yu, Z., Brannigan, J.A., Moss, D.K., Brzozowski, A.M., Wilkinson, A.J., Holder, A.A., Tate, E.W., Leatherbarrow, R.J.
Deposit date:2012-07-06
Release date:2012-10-17
Last modified:2012-11-07
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Design and Synthesis of Inhibitors of Plasmodium Falciparum N-Myristoyltransferase, a Promising Target for Anti-Malarial Drug Discovery.
J.Med.Chem., 55, 2012
4B12
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PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH A BOUND BENZOFURAN INHIBITOR (COMPOUND 23)
Descriptor:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, 1-[3-methyl-4-(piperidin-4-yloxy)-1-benzofuran-2-yl]-3-phenylpropan-1-one, 2-oxopentadecyl-CoA, ...
Authors:Yu, Z., Brannigan, J.A., Moss, D.K., Brzozowski, A.M., Wilkinson, A.J., Holder, A.A., Tate, E.W., Leatherbarrow, R.J.
Deposit date:2012-07-06
Release date:2012-10-17
Last modified:2012-11-07
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Design and Synthesis of Inhibitors of Plasmodium Falciparum N-Myristoyltransferase, a Promising Target for Anti-Malarial Drug Discovery.
J.Med.Chem., 55, 2012
4B13
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PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH A BOUND BENZOFURAN INHIBITOR (COMPOUND 25)
Descriptor:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, 4-{[2-(3-benzyl-1,2,4-oxadiazol-5-yl)-3-methyl-1-benzofuran-4-yl]oxy}piperidine, 2-oxopentadecyl-CoA, ...
Authors:Yu, Z., Brannigan, J.A., Moss, D.K., Brzozowski, A.M., Wilkinson, A.J., Holder, A.A., Tate, E.W., Leatherbarrow, R.J.
Deposit date:2012-07-06
Release date:2012-10-17
Last modified:2012-11-07
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Design and Synthesis of Inhibitors of Plasmodium Falciparum N-Myristoyltransferase, a Promising Target for Antimalarial Drug Discovery.
J.Med.Chem., 55, 2012
4B14
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PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH A BOUND BENZOFURAN INHIBITOR (COMPOUND 26)
Descriptor:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, DIMETHYL SULFOXIDE, 3-methoxybenzyl 3-methyl-4-(piperidin-4-yloxy)-1-benzofuran-2-carboxylate, ...
Authors:Yu, Z., Brannigan, J.A., Moss, D.K., Brzozowski, A.M., Wilkinson, A.J., Holder, A.A., Tate, E.W., Leatherbarrow, R.J.
Deposit date:2012-07-06
Release date:2012-10-17
Last modified:2012-11-07
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Design and Synthesis of Inhibitors of Plasmodium Falciparum N-Myristoyltransferase, a Promising Target for Anti-Malarial Drug Discovery.
J.Med.Chem., 55, 2012
4OWP
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CRYSTAL STRUCTURE OF RPN11 IN A HETERODIMER COMPLEX WITH RPN8, REPRESENTING THE ACTIVE PORTION OF THE PROTEOSOME LID.
Descriptor:26S proteasome regulatory subunit RPN8, 26S proteasome regulatory subunit RPN11, ZINC ION
Authors:Yu, Z., Mansour, W., Nakasone, M.A., Glickman, M.H., Dvir, H.
Deposit date:2014-02-03
Release date:2015-08-05
Last modified:2017-09-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structure of rpn11 in a heterodimer complex with rpn8, representing the active portion of the proteosome lid. In preparation.
To Be Published
4UFV
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PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE IN COMPLEX WITH A PYRIDYL INHIBITOR (COMPOUND 18)
Descriptor:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, 2-oxopentadecyl-CoA, N-[2-(3-methoxyphenyl)ethanimidoyl]-2-piperidin-4-yloxy-benzamide, ...
Authors:Yu, Z., Brannigan, J.A., Rangachari, K., Heal, W.P., Wilkinson, A.J., Holder, A.A., Tate, E.W., Leatherbarrow, R.J.
Deposit date:2015-03-19
Release date:2016-02-03
Last modified:2016-04-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Discovery of Pyridyl-Based Inhibitors of Plasmodium Falciparum N-Myristoyltransferase
Medchemcomm, 6, 2015
4UFW
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PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE IN COMPLEX WITH A PYRIDYL INHIBITOR (COMPOUND 22)
Descriptor:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, 2-oxopentadecyl-CoA, 4-chloranyl-N-[2-(3-methoxyphenyl)ethanimidoyl]-2-piperidin-4-yloxy-benzamide, ...
Authors:Yu, Z., Brannigan, J.A., Rangachari, K., Heal, W.P., Wilkinson, A.J., Holder, A.A., Tate, E.W., Leatherbarrow, R.J.
Deposit date:2015-03-19
Release date:2016-02-03
Last modified:2016-04-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Discovery of Pyridyl-Based Inhibitors of Plasmodium Falciparum N-Myristoyltransferase
Medchemcomm, 6, 2015
4UFX
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PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE IN COMPLEX WITH A PYRIDYL INHIBITOR (COMPOUND 19)
Descriptor:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, N-[2-(3-methoxyphenyl)ethanimidoyl]-2-piperidin-4-yloxy-pyridine-3-carboxamide, 2-oxopentadecyl-CoA, ...
Authors:Yu, Z., Brannigan, J.A., Rangachari, K., Heal, W.P., Wilkinson, A.J., Holder, A.A., Tate, E.W., Leatherbarrow, R.J.
Deposit date:2015-03-19
Release date:2016-02-03
Last modified:2016-04-20
Method:X-RAY DIFFRACTION (1.49 Å)
Cite:Discovery of Pyridyl-Based Inhibitors of Plasmodium Falciparum N-Myristoyltransferase
Medchemcomm, 6, 2015
3MOW
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CRYSTAL STRUCTURE OF SHP2 IN COMPLEX WITH A TAUTOMYCETIN ANALOG TTN D-1
Descriptor:Tyrosine-protein phosphatase non-receptor type 11, (2Z)-2-[(1R)-3-{[(1R,2S,3R,6S,7S,10S,12S,15E,17E)-18-carboxy-16-ethyl-3,7-dihydroxy-1,2,6,10,12-pentamethyl-5-oxooctadeca-15,17-dien-1-yl]oxy}-1-hydroxy-3-oxopropyl]-3-methylbut-2-enedioic acid
Authors:Zhang, Z.-Y., Liu, S., Yu, Z., Yu, X.
Deposit date:2010-04-23
Release date:2011-05-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of SHP2 in complex with a tautomycetin analog TTN D-1
To be Published
3O5X
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CRYSTAL STRUCTURE OF THE ONCOGENIC TYROSINE PHOSPHATASE SHP2 COMPLEXED WITH A SALICYLIC ACID-BASED SMALL MOLECULE INHIBITOR
Descriptor:Tyrosine-protein phosphatase non-receptor type 11, 3-{1-[3-(biphenyl-4-ylamino)-3-oxopropyl]-1H-1,2,3-triazol-4-yl}-6-hydroxy-1-methyl-2-phenyl-1H-indole-5-carboxylic acid
Authors:Zhang, Z.-Y., Zhang, X., He, Y., Liu, S., Yu, Z., Jiang, Z., Yang, Z., Dong, Y., Nabinger, S.C., Wu, L., Gunawan, A.M., Wang, L., Chan, R.J.
Deposit date:2010-07-28
Release date:2010-08-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Salicylic acid based small molecule inhibitor for the oncogenic Src homology-2 domain containing protein tyrosine phosphatase-2 (SHP2).
J.Med.Chem., 53, 2010
4QQN
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PROTEIN ARGININE METHYLTRANSFERASE 3 IN COMPLEX WITH COMPOUND MTV044246
Descriptor:PRMT3 protein, 1-{2-[1-(aminomethyl)cyclohexyl]ethyl}-3-isoquinolin-6-ylurea, GLYCEROL, ...
Authors:Dong, A., Dobrovetsky, E., Tempel, W., He, H., Zhao, K., Smil, D., Landon, M., Luo, X., Chen, Z., Dai, M., Yu, Z., Lin, Y., Zhang, H., Zhao, K., Schapira, M., Brown, P.J., Bountra, C., Arrowsmith, C.H., Edwards, A.M., Vedadi, M., Structural Genomics Consortium (SGC)
Deposit date:2014-06-27
Release date:2014-09-17
Last modified:2018-05-16
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Discovery of Potent and Selective Allosteric Inhibitors of Protein Arginine Methyltransferase 3 (PRMT3).
J. Med. Chem., 61, 2018
2WUU
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STRUCTURE OF N-MYRISTOYLTRANSFERASE FROM L. DONOVANI
Descriptor:N-MYRISTOYLTRANSFERASE, 2-oxopentadecyl-CoA
Authors:Brannigan, J.A., Smith, B.A., Yu, Z., Hodgkinson, M.R., Leatherbarrow, R.J., Tate, E.W., Brzozowski, A.M., Smith, D.F., Wilkinson, A.J.
Deposit date:2009-10-09
Release date:2009-12-01
Last modified:2012-07-18
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:N-Myristoyltransferase from Leishmania Donovani: Structural and Functional Characterisation of a Potential Drug Target for Visceral Leishmaniasis.
J.Mol.Biol., 396, 2010
3J6C
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CRYO-EM STRUCTURE OF MAVS CARD FILAMENT
Descriptor:Mitochondrial antiviral-signaling protein
Authors:Xu, H., He, X., Zheng, H., Huang, L.J., Hou, F., Yu, Z., de la Cruz, M.J., Borkowski, B., Zhang, X., Chen, Z.J., Jiang, Q.-X.
Deposit date:2014-02-04
Release date:2014-03-05
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (9.6 Å)
Cite:Structural basis for the prion-like MAVS filaments in antiviral innate immunity.
Elife, 3, 2014
4BBH
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PLASMODIUM VIVAX N-MYRISTOYLTRANSFERASE WITH A BOUND BENZOTHIOPHENE INHIBITOR
Descriptor:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, DIMETHYL SULFOXIDE, 2-oxopentadecyl-CoA, ...
Authors:Rackham, M.D., Brannigan, J.A., Moss, D.K., Yu, Z., Wilkinson, A.J., Holder, A.A., Tate, E.W., Leatherbarrow, R.J.
Deposit date:2012-09-23
Release date:2012-12-05
Last modified:2013-01-23
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Discovery of Novel and Ligand-Efficient Inhibitors of Plasmodium Falciparum and Plasmodium Vivax N-Myristoyltransferase.
J.Med.Chem., 56, 2013
4JS9
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STRUCTURAL CHARACTERIZATION OF INDUCIBLE NITRIC OXIDE SYNTHASE SUBSTITUTED WITH MESOHEME
Descriptor:Nitric oxide synthase, inducible, Mesoheme, ...
Authors:Hannibal, L., Page, R.C., Bolisetty, K., Yu, Z., Misra, S., Stuehr, D.J.
Deposit date:2013-03-22
Release date:2014-04-23
Method:X-RAY DIFFRACTION (2.784 Å)
Cite:Kinetic and Structural Characterization of Inducible Nitric Oxide Synthase Substituted With Mesoheme
To be Published
4PKM
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CRYSTAL STRUCTURE OF BACILLUS THURINGIENSIS CRY51AA1 PROTOXIN AT 1.65 ANGSTROMS RESOLUTION
Descriptor:Cry51Aa1, GLYCEROL, SULFATE ION, ...
Authors:Xu, C., Chinte, U., Chen, L., Yao, Q., Zhou, D., Meng, Y., Li, L., Rose, J., Bi, L.J., Yu, Z., Sun, M., Wang, B.C.
Deposit date:2014-05-15
Release date:2015-06-03
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of Cry51Aa1: A potential novel insecticidal aerolysin-type beta-pore-forming toxin from Bacillus thuringiensis.
Biochem.Biophys.Res.Commun., 462, 2015
4PVG
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CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE SHP2 CATALYTIC DOMAIN COMPLEX WITH SMALL MOLECULAR COMPOUND L88N79
Descriptor:Tyrosine-protein phosphatase non-receptor type 11, 2-[3-({4-[(1,3-benzodioxol-5-ylmethyl)amino]-4-oxobutanoyl}amino)phenyl]-6-hydroxy-3-iodo-1-methyl-1H-indole-5-carboxylic acid
Authors:Zhang, Z.-Y., Zeng, L., Liu, D., Yu, Z.
Deposit date:2014-03-17
Release date:2015-04-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of protein tyrosine Shp2 catalytic domain complex with compound L88N79
To be Published
4RYL
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HUMAN PROTEIN ARGININE METHYLTRANSFERASE 3 IN COMPLEX WITH 1-ISOQUINOLIN-6-YL-3-[2-OXO-2-(PYRROLIDIN-1-YL)ETHYL]UREA
Descriptor:PRMT3 protein, 1-isoquinolin-6-yl-3-[2-oxo-2-(pyrrolidin-1-yl)ethyl]urea, UNKNOWN ATOM OR ION
Authors:Dong, A., Dobrovetsky, E., Kaniskan, H.U., Szewczyk, M., Yu, Z., Eram, M.S., Yang, X., Schmidt, K., Luo, X., Dai, M., He, F., Zang, I., Lin, Y., Kennedy, S., Li, F., Tempel, W., Smil, D., Min, S.J., Landon, M., Lin-Jones, J., Huang, X.P., Roth, B.L., Schapira, M., Atadja, P., Barsyte-Lovejoy, D., Bountra, C., Edwards, A.M., Arrowsmith, C.H., Brown, P.J., Zhao, K., Jin, J., Vedadi, M., Structural Genomics Consortium (SGC)
Deposit date:2014-12-15
Release date:2015-02-25
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A Potent, Selective and Cell-Active Allosteric Inhibitor of Protein Arginine Methyltransferase 3 (PRMT3).
Angew.Chem.Int.Ed.Engl., 54, 2015
5A27
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LEISHMANIA MAJOR N-MYRISTOYLTRANSFERASE IN COMPLEX WITH A CHLOROPHENYL 1,2,4-OXADIAZOLE INHIBITOR.
Descriptor:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, TETRADECANOYL-COA, 5-chloranyl-N-[2-(3-methoxyphenyl)ethanimidoyl]-2-piperidin-4-yloxy-benzamide, ...
Authors:Rackham, M.D., Yu, Z., Brannigan, J.A., Heal, W.P., Paape, D., Barker, K.V., Wilkinson, A.J., Smith, D.F., Tate, E.W., Leatherbarrow, R.J.
Deposit date:2015-05-15
Release date:2016-03-23
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Discovery of High Affinity Inhibitors of Leishmania Donovani N-Myristoyltransferase.
Medchemcomm, 6, 2015
5A28
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LEISHMANIA MAJOR N-MYRISTOYLTRANSFERASE IN COMPLEX WITH A CHLOROPHENYL 1,3,4-OXADIAZOLE INHIBITOR.
Descriptor:GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE, TETRADECANOYL-COA, 4-(4-chloro-2-{5-[(trimethyl-1H-pyrazol-4-yl)methyl]-1,3,4-oxadiazol-2-yl}phenoxy)piperidine, ...
Authors:Rackham, M.D., Yu, Z., Brannigan, J.A., Heal, W.P., Paape, D., Barker, K.V., Wilkinson, A.J., Smith, D.F., Tate, E.W., Leatherbarrow, R.J.
Deposit date:2015-05-15
Release date:2016-03-23
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Discovery of High Affinity Inhibitors of Leishmania Donovani N-Myristoyltransferase.
Medchemcomm, 6, 2015
5CD7
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CRYSTAL STRUCTURE OF THE NTD L199M OF DROSOPHILA OSKAR PROTEIN
Descriptor:Maternal effect protein oskar, GLYCEROL
Authors:Yang, N., Hu, M., Yu, Z., Wang, M., Lehmann, R., Xu, R.M.
Deposit date:2015-07-03
Release date:2015-09-02
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.502 Å)
Cite:Structure of Drosophila Oskar reveals a novel RNA binding protein
Proc.Natl.Acad.Sci.USA, 112, 2015
5CD8
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CRYSTAL STRUCTURE OF THE NTD OF DROSOPHILA OSKAR PROTEIN
Descriptor:Maternal effect protein oskar, GLYCEROL
Authors:Yang, N., Hu, M., Yu, Z., Wang, M., Lehmann, R., Xu, R.M.
Deposit date:2015-07-03
Release date:2015-09-02
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Structure of Drosophila Oskar reveals a novel RNA binding protein
Proc.Natl.Acad.Sci.USA, 112, 2015