Author results

1BYJ
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GENTAMICIN C1A A-SITE COMPLEX
Descriptor:RNA (16S RNA), 3,4-DIDEOXY-2,6-AMINO-ALPHA-D GALACTOPYRANOSE, 3,5-DIAMINO-CYCLOHEXANOL, ...
Authors:Yoshizawa, S., Fourmy, D., Puglisi, J.D.
Deposit date:1998-10-16
Release date:1999-10-29
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structural origins of gentamicin antibiotic action.
EMBO J., 17, 1998
1WSU
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C-TERMINAL DOMAIN OF ELONGATION FACTOR SELB COMPLEXED WITH SECIS RNA
Descriptor:5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP*GP*UP*CP*U*GP*GP*CP*AP*AP*CP*GP*CP*C)-3', Selenocysteine-specific elongation factor
Authors:Yoshizawa, S., Rasubala, L., Ose, T., Kohda, D., Fourmy, D., Maenaka, K.
Deposit date:2004-11-11
Release date:2005-01-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for mRNA recognition by elongation factor SelB
Nat.Struct.Mol.Biol., 12, 2005
2PJP
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STRUCTURE OF THE MRNA-BINDING DOMAIN OF ELONGATION FACTOR SELB FROM E.COLI IN COMPLEX WITH SECIS RNA
Descriptor:SECIS RNA, Selenocysteine-specific elongation factor, MAGNESIUM ION, ...
Authors:Soler, N., Fourmy, D., Yoshizawa, S.
Deposit date:2007-04-16
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural insight into a molecular switch in tandem winged-helix motifs from elongation factor SelB.
J.Mol.Biol., 370, 2007
2PLY
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STRUCTURE OF THE MRNA BINDING FRAGMENT OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA.
Descriptor:RNA (5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP*GP*UP*CP*UP*GP*GP*CP*AP*AP*CP*GP*CP*C)-3'), Selenocysteine-specific elongation factor, MAGNESIUM ION, ...
Authors:Soler, N., Fourmy, D., Yoshizawa, S.
Deposit date:2007-04-20
Release date:2007-11-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insight into a molecular switch in tandem winged-helix motifs from elongation factor SelB.
J.Mol.Biol., 370, 2007
1K6G
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SOLUTION STRUCTURE OF CONSERVED AGNN TETRALOOPS: INSIGHTS INTO RNT1P RNA PROCESSING
Descriptor:RNA (5'-R(P*GP*GP*CP*GP*UP*CP*AP*UP*GP*AP*GP*UP*CP*CP*AP*UP*GP*GP*CP*GP*CP*C)-3')
Authors:Lebars, I., Lamontagne, B., Yoshizawa, S., Abou Elela, S., Fourmy, D.
Deposit date:2001-10-16
Release date:2001-12-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of conserved AGNN tetraloops: insights into Rnt1p RNA processing.
EMBO J., 20, 2001
1K6H
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SOLUTION STRUCTURE OF CONSERVED AGNN TETRALOOPS: INSIGHTS INTO RNT1P RNA PROCESSING
Descriptor:RNA (5'-R(P*GP*GP*CP*GP*UP*GP*UP*UP*CP*AP*GP*AP*AP*GP*AP*AP*CP*GP*CP*GP*CP*C)-3')
Authors:Lebars, I., Lamontagne, B., Yoshizawa, S., Abou Elela, S., Fourmy, D.
Deposit date:2001-10-16
Release date:2001-12-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of conserved AGNN tetraloops: insights into Rnt1p RNA processing.
EMBO J., 20, 2001
1MT4
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STRUCTURE OF 23S RIBOSOMAL RNA HAIRPIN 35
Descriptor:23S ribosomal Hairpin 35
Authors:Lebars, I., Yoshizawa, S., Stenholm, A.R., Guittet, E., Douthwaite, S., Fourmy, D.
Deposit date:2002-09-20
Release date:2003-01-14
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of 23S rRNA hairpin 35 and its interaction with the tylosin-resistance methyltransferase RlmAII
Embo J., 22, 2003
2GV3
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TRANSLOCATION OF A TRNA WITH AN EXTENDED ANTICODON THROUGH THE RIBOSOME
Descriptor:5'-R(*GP*GP*CP*CP*AP*GP*AP*CP*UP*CP*CP*CP*GP*AP*AP*UP*CP*UP*GP*GP*CP*C)-3'
Authors:Phelps, S.S., Gaudin, C., Yoshizawa, S., Benitez, C., Fourmy, D., Joseph, S.
Deposit date:2006-05-02
Release date:2006-08-08
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Translocation of a tRNA with an Extended Anticodon Through the Ribosome.
J.Mol.Biol., 360, 2006
3X3B
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CRYSTAL STRUCTURE OF THE LIGHT-DRIVEN SODIUM PUMP KR2 IN ACIDIC STATE
Descriptor:Sodium pumping rhodopsin, RETINAL, OLEIC ACID, ...
Authors:Kato, H.E., Inoue, K., Abe-Yoshizumi, R., Kato, Y., Ono, H., Konno, M., Ishizuka, T., Hoque, M.R., Hososhima, S., Kunitomo, H., Ito, J., Yoshizawa, S., Yamashita, K., Takemoto, M., Nishizawa, T., Taniguchi, R., Kogure, K., Maturana, A.D., Iino, Y., Yawo, H., Ishitani, R., Kandori, H., Nureki, O.
Deposit date:2015-01-18
Release date:2015-04-08
Last modified:2015-05-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump
Nature, 521, 2015
3X3C
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CRYSTAL STRUCTURE OF THE LIGHT-DRIVEN SODIUM PUMP KR2 IN NEUTRAL STATE
Descriptor:Sodium pumping rhodopsin, RETINAL, OLEIC ACID
Authors:Kato, H.E., Inoue, K., Abe-Yoshizumi, R., Kato, Y., Ono, H., Konno, M., Ishizuka, T., Hoque, M.R., Hososhima, S., Kunitomo, H., Ito, J., Yoshizawa, S., Yamashita, K., Takemoto, M., Nishizawa, T., Taniguchi, R., Kogure, K., Maturana, A.D., Iino, Y., Yawo, H., Ishitani, R., Kandori, H., Nureki, O.
Deposit date:2015-01-18
Release date:2015-04-08
Last modified:2015-05-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for Na(+) transport mechanism by a light-driven Na(+) pump
Nature, 521, 2015
1A3M
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PAROMOMYCIN BINDING INDUCES A LOCAL CONFORMATIONAL CHANGE IN THE A SITE OF 16S RRNA, NMR, 20 STRUCTURES
Descriptor:16S RRNA (5'-R(*GP*GP*CP*GP*UP*CP*AP*CP*AP*CP*CP*UP*UP*C)-3'), 16S RRNA (5'-R(*GP*GP*GP*UP*GP*AP*AP*GP*UP*CP*GP*CP*C)-3')
Authors:Fourmy, D., Yoshizawa, S., Puglisi, J.D.
Deposit date:1998-01-22
Release date:1998-04-29
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Paromomycin binding induces a local conformational change in the A-site of 16 S rRNA.
J.Mol.Biol., 277, 1998
1MFK
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STRUCTURE OF PROKARYOTIC SECIS MRNA HAIRPIN
Descriptor:5'-R(P*GP*GP*CP*GP*GP*UP*UP*GP*CP*AP*GP*GP*UP*CP*UP*GP*CP*AP*CP*CP*GP*CP*C)-3'
Authors:Fourmy, D., Guittet, E., Yoshizawa, S.
Deposit date:2002-08-12
Release date:2002-11-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of Prokaryotic SECIS mRNA Hairpin and its Interaction with Elongation Factor SELB
J.Mol.Biol., 324, 2002
1ZC5
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STRUCTURE OF THE RNA SIGNAL ESSENTIAL FOR TRANSLATIONAL FRAMESHIFTING IN HIV-1
Descriptor:HIV-1 frameshift RNA signal
Authors:Gaudin, C., Mazauric, M.H., Traikia, M., Guittet, E., Yoshizawa, S., Fourmy, D.
Deposit date:2005-04-11
Release date:2005-06-07
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of the RNA Signal Essential for Translational Frameshifting in HIV-1
J.Mol.Biol., 349, 2005
2HNS
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STRUCTURE OF THE AAGU TETRALOOP
Descriptor:5'-R(*GP*GP*CP*GP*UP*GP*AP*UP*CP*AP*AP*GP*UP*GP*AP*UP*CP*GP*CP*GP*CP*C)-3'
Authors:Gaudin, C., Fourmy, F., Yoshizawa, S.
Deposit date:2006-07-13
Release date:2006-10-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of an AAGU Tetraloop and its Contribution to Substrate Selection by yeast RNase III.
J.Mol.Biol., 363, 2006
2UWM
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C-TERMINAL DOMAIN(WH2-WH4) OF ELONGATION FACTOR SELB IN COMPLEX WITH SECIS RNA
Descriptor:SELENOCYSTEINE-SPECIFIC ELONGATION FACTOR, 5'-R(*GP*GP*CP*GP*UP*UP*GP*CP*CP*GP *GP*UP*CP*UP*GP*GP*CP*AP*AP*CP*GP*CP*C)-3'
Authors:Ose, T., Soler, N., Rasubala, L., Kuroki, K., Kohda, D., Fourmy, D., Yoshizawa, S., Maenaka, K.
Deposit date:2007-03-22
Release date:2007-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural Basis for Dynamic Interdomain Movement and RNA Recognition of the Selenocysteine-Specific Elongation Factor Selb.
Structure, 15, 2007
5B2N
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CRYSTAL STRUCTURE OF THE LIGHT-DRIVEN CHLORIDE ION-PUMPING RHODOPSIN, CLP, FROM NONLABENS MARINUS
Descriptor:Chloride pumping rhodopsin, RETINAL, CHLORIDE ION, ...
Authors:Hosaka, T., Kimura-Someya, T., Shirouzu, M.
Deposit date:2016-01-20
Release date:2016-07-13
Last modified:2016-09-07
Method:X-RAY DIFFRACTION (1.581 Å)
Cite:Structural Mechanism for Light-driven Transport by a New Type of Chloride Ion Pump, Nonlabens marinus Rhodopsin-3
J.Biol.Chem., 291, 2016