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8DTU
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BU of 8dtu by Molmil
The complex of nanobody 5344N74D with BCL11A ZF6.
Descriptor: B-cell lymphoma/leukemia 11A, Nanobody 5344N74D, ZINC ION
Authors:Yin, M, Tenglin, K, Zhai, L, Dassama, L.M, Orkin, S.H.
Deposit date:2022-07-26
Release date:2023-02-01
Method:X-RAY DIFFRACTION (2.447 Å)
Cite:Evolution of nanobodies specific for BCL11A.
Proc.Natl.Acad.Sci.USA, 120, 2023
8DTN
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BU of 8dtn by Molmil
The complex of nanobody 6101 with BCL11A ZF6
Descriptor: B-cell lymphoma/leukemia 11A, MAGNESIUM ION, Nanobody 6101, ...
Authors:Yin, M, Tenglin, K, Zhai, L, Dassama, L.M, Orkin, S.H.
Deposit date:2022-07-26
Release date:2023-02-01
Method:X-RAY DIFFRACTION (2.199 Å)
Cite:Evolution of nanobodies specific for BCL11A.
Proc.Natl.Acad.Sci.USA, 120, 2023
5YEG
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BU of 5yeg by Molmil
Crystal structure of CTCF ZFs4-8-Hs5-1a complex
Descriptor: DNA (5'-D(*AP*CP*TP*TP*TP*AP*AP*CP*CP*AP*GP*CP*AP*GP*AP*GP*GP*GP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*CP*CP*CP*TP*CP*TP*GP*CP*TP*GP*GP*TP*TP*AP*AP*AP*G)-3'), Transcriptional repressor CTCF, ...
Authors:Yin, M, Wang, J, Wang, M, Li, X.
Deposit date:2017-09-17
Release date:2017-11-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular mechanism of directional CTCF recognition of a diverse range of genomic sites
Cell Res., 27, 2017
5YEL
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BU of 5yel by Molmil
Crystal structure of CTCF ZFs6-11-gb7CSE
Descriptor: DNA (26-MER), Transcriptional repressor CTCF, ZINC ION
Authors:Yin, M, Wang, J, Wang, M, Li, X, Wang, Y.
Deposit date:2017-09-18
Release date:2017-11-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.96 Å)
Cite:Molecular mechanism of directional CTCF recognition of a diverse range of genomic sites
Cell Res., 27, 2017
5YEH
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BU of 5yeh by Molmil
Crystal structure of CTCF ZFs4-8-eCBS
Descriptor: DNA (5'-D(*AP*CP*GP*GP*TP*TP*TP*CP*CP*GP*CP*TP*AP*GP*AP*GP*GP*GP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*CP*CP*CP*TP*CP*TP*AP*GP*CP*GP*GP*AP*AP*AP*CP*CP*G)-3'), Transcriptional repressor CTCF, ...
Authors:Yin, M, Wang, J, Wang, M, Li, X, Wang, Y.
Deposit date:2017-09-17
Release date:2017-11-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.328 Å)
Cite:Molecular mechanism of directional CTCF recognition of a diverse range of genomic sites
Cell Res., 27, 2017
5YEF
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BU of 5yef by Molmil
Crystal structure of CTCF ZFs2-8-Hs5-1aE
Descriptor: DNA (27-MER), Transcriptional repressor CTCF, ZINC ION
Authors:Yin, M, Wang, J, Wang, M, Li, X, Wang, Y.
Deposit date:2017-09-17
Release date:2017-11-29
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.807 Å)
Cite:Molecular mechanism of directional CTCF recognition of a diverse range of genomic sites
Cell Res., 27, 2017
6IXH
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BU of 6ixh by Molmil
Type VI secretion system membrane core complex
Descriptor: Type VI Secretion System TssJ, Type VI Secretion System TssM
Authors:Yin, M, Yan, Z.
Deposit date:2018-12-10
Release date:2019-01-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Architecture of type VI secretion system membrane core complex.
Cell Res., 29, 2019
5ZDH
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BU of 5zdh by Molmil
CryoEM structure of ETEC Pilotin-Secretin AspS-GspD complex
Descriptor: Type II secretion system lipoprotein, Type II secretion system protein D
Authors:Yin, M, Yan, Z, Li, X.
Deposit date:2018-02-23
Release date:2018-04-18
Last modified:2018-06-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural insight into the assembly of the type II secretion system pilotin-secretin complex from enterotoxigenic Escherichia coli.
Nat Microbiol, 3, 2018
1THS
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BU of 1ths by Molmil
STRUCTURES OF THROMBIN COMPLEXES WITH A DESIGNED AND A NATURAL EXOSITE INHIBITOR
Descriptor: ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), SYNTHETIC INHIBITOR
Authors:Qiu, X, Yin, M, Padmanabhan, K.P, Krstenansky, J.L, Tulinsky, A.
Deposit date:1993-06-16
Release date:1994-01-31
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of thrombin complexes with a designed and a natural exosite peptide inhibitor.
J.Biol.Chem., 268, 1993
1THR
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BU of 1thr by Molmil
STRUCTURES OF THROMBIN COMPLEXES WITH A DESIGNED AND A NATURAL EXOSITE INHIBITOR
Descriptor: ALPHA-THROMBIN (LARGE SUBUNIT), ALPHA-THROMBIN (SMALL SUBUNIT), HIRULLIN
Authors:Qiu, X, Yin, M, Padmanabhan, K.P, Krstenansky, J.L, Tulinsky, A.
Deposit date:1993-06-16
Release date:1994-01-31
Last modified:2013-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of thrombin complexes with a designed and a natural exosite peptide inhibitor.
J.Biol.Chem., 268, 1993
5DQU
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BU of 5dqu by Molmil
Crystal Structure of Cas-DNA-10 complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (5'-D(*GP*AP*GP*TP*CP*GP*AP*TP*GP*CP*TP*TP*TP*TP*T)-3'), ...
Authors:Wang, J, Li, J, Zhao, H, Sheng, G, Wang, M, Yin, M, Wang, Y.
Deposit date:2015-09-15
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems.
Cell, 163, 2015
5DQT
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BU of 5dqt by Molmil
Crystal Structure of Cas-DNA-22 complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (33-MER), ...
Authors:Wang, J, Li, J, Zhao, H, Sheng, G, Wang, M, Yin, M, Wang, Y.
Deposit date:2015-09-15
Release date:2015-11-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems.
Cell, 163, 2015
5DLJ
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BU of 5dlj by Molmil
Crystal Structure of Cas-DNA-N1 complex
Descriptor: 39-mer DNA N1-F, 39-mer DNA N1-R, CRISPR-associated endonuclease Cas1, ...
Authors:Wang, J, Li, J, Zhao, H, Sheng, G, Wang, M, Yin, M, Wang, Y.
Deposit date:2015-09-05
Release date:2015-11-11
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems.
Cell, 163, 2015
5DQZ
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BU of 5dqz by Molmil
Crystal Structure of Cas-DNA-PAM complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2, DNA (36-MER), ...
Authors:Wang, J, Li, J, Zhao, H, Sheng, G, Wang, M, Yin, M, Wang, Y.
Deposit date:2015-09-15
Release date:2015-11-11
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural and Mechanistic Basis of PAM-Dependent Spacer Acquisition in CRISPR-Cas Systems.
Cell, 163, 2015
6L7A
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BU of 6l7a by Molmil
CsgFG complex in Curli biogenesis system
Descriptor: CsgF, Curli production assembly/transport protein CsgG
Authors:Yan, Z.F, Yin, M, Chen, J.N, Li, X.M.
Deposit date:2019-11-01
Release date:2020-01-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Assembly and substrate recognition of curli biogenesis system.
Nat Commun, 11, 2020
6L7C
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BU of 6l7c by Molmil
CsgFG complex with substrate CsgAN6 peptide in Curli biogenesis system
Descriptor: CsgF, Curli production assembly/transport protein CsgG, Major curlin subunit CsgA
Authors:Yan, Z.F, Yin, M, Chen, J.N, Li, X.M.
Deposit date:2019-11-01
Release date:2020-01-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.34 Å)
Cite:Assembly and substrate recognition of curli biogenesis system.
Nat Commun, 11, 2020
5WQ7
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BU of 5wq7 by Molmil
CryoEM structure of type II secretion system secretin GspD in E.coli K12
Descriptor: Putative type II secretion system protein D
Authors:Yan, Z, Yin, M, Li, X.
Deposit date:2016-11-23
Release date:2016-12-28
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Structural insights into the secretin translocation channel in the type II secretion system
Nat. Struct. Mol. Biol., 24, 2017
5WQ9
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BU of 5wq9 by Molmil
CryoEM structure of type II secretion system secretin GspD G453A mutant in Vibrio cholerae
Descriptor: Type II secretion system protein D
Authors:Yan, Z, Yin, M, Li, X.
Deposit date:2016-11-23
Release date:2016-12-28
Last modified:2017-02-22
Method:ELECTRON MICROSCOPY (4.22 Å)
Cite:Structural insights into the secretin translocation channel in the type II secretion system
Nat. Struct. Mol. Biol., 24, 2017
5WQ8
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BU of 5wq8 by Molmil
CryoEM structure of type II secretion system secretin GspD in Vibrio cholerae
Descriptor: Type II secretion system protein D
Authors:Yan, Z, Yin, M, Li, X.
Deposit date:2016-11-23
Release date:2016-12-28
Last modified:2019-10-16
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structural insights into the secretin translocation channel in the type II secretion system
Nat. Struct. Mol. Biol., 24, 2017
7WN7
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BU of 7wn7 by Molmil
Crystal structure of HearNPV P26
Descriptor: CHLORIDE ION, SULFATE ION, p26
Authors:Kuang, W, Hu, Z, Gong, P.
Deposit date:2022-01-17
Release date:2022-11-23
Last modified:2023-01-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dual roles and evolutionary implications of P26/poxin in antagonizing intracellular cGAS-STING and extracellular melanization immunity.
Nat Commun, 13, 2022
4UMY
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BU of 4umy by Molmil
IDH1 R132H in complex with cpd 1
Descriptor: GLYCEROL, ISOCITRATE DEHYDROGENASE [NADP] CYTOPLASMIC, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:McLean, L, Zhang, Y, Mathieu, M.
Deposit date:2014-05-22
Release date:2014-11-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Selective Inhibition of Mutant Isocitrate Dehydrogenase 1 (Idh1) Via Disruption of a Metal Binding Network by an Allosteric Small Molecule.
J.Biol.Chem., 290, 2015
4UMX
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BU of 4umx by Molmil
IDH1 R132H in complex with cpd 1
Descriptor: 2,6-bis(1H-imidazol-1-ylmethyl)-4-(2,4,4-trimethylpentan-2-yl)phenol, GLYCEROL, ISOCITRATE DEHYDROGENASE [NADP] CYTOPLASMIC, ...
Authors:Mathieu, M, Marquette, J.P.
Deposit date:2014-05-22
Release date:2014-11-19
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Selective Inhibition of Mutant Isocitrate Dehydrogenase 1 (Idh1) Via Disruption of a Metal Binding Network by an Allosteric Small Molecule.
J.Biol.Chem., 290, 2015
6XF6
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BU of 6xf6 by Molmil
Cryo-EM structure of a biotinylated SARS-CoV-2 spike probe in the prefusion state (1 RBD up)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Cerutti, G, Gorman, J, Kwong, P.D, Shapiro, L.
Deposit date:2020-06-15
Release date:2020-09-02
Last modified:2020-12-02
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure-Based Design with Tag-Based Purification and In-Process Biotinylation Enable Streamlined Development of SARS-CoV-2 Spike Molecular Probes.
SSRN, 2020
6XF5
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BU of 6xf5 by Molmil
Cryo-EM structure of a biotinylated SARS-CoV-2 spike probe in the prefusion state (RBDs down)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Cerutti, G, Gorman, J, Kwong, P.D, Shapiro, L.
Deposit date:2020-06-15
Release date:2020-09-02
Last modified:2020-12-02
Method:ELECTRON MICROSCOPY (3.45 Å)
Cite:Structure-Based Design with Tag-Based Purification and In-Process Biotinylation Enable Streamlined Development of SARS-CoV-2 Spike Molecular Probes.
SSRN, 2020
2SPT
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BU of 2spt by Molmil
DIFFERENCES IN THE METAL ION STRUCTURE BETWEEN SR-AND CA-PROTHROMBIN FRAGMENT 1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PROTHROMBIN, STRONTIUM ION
Authors:Tulinsky, A.
Deposit date:1994-02-01
Release date:1994-05-31
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Differences in the metal ion structure between Sr- and Ca-prothrombin fragment 1.
Biochemistry, 33, 1994

 

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