Author results

3RZG
  • Download 3rzg
  • View 3rzg
Molmil generated image of 3rzg
DUPLEX INTERROGATION BY A DIRECT DNA REPAIR PROTEIN IN THE SEARCH OF DAMAGE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, 5'-D(*CP*TP*GP*TP*CP*AP*TP*CP*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*GP*AP*TP*GP*AP*CP*A)-3', ...
Authors:Yi, C., Chen, B., Qi, B., Zhang, W., Jia, G., Zhang, L., Li, C., Dinner, A., Yang, C., He, C.
Deposit date:2011-05-11
Release date:2012-06-06
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
3RZH
  • Download 3rzh
  • View 3rzh
Molmil generated image of 3rzh
DUPLEX INTERROGATION BY A DIRECT DNA REPAIR PROTEIN IN THE SEARCH OF DAMAGE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, 5'-D(*CP*TP*GP*TP*CP*TP*(ME6)P*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*GP*AP*GP*AP*CP*A)-3', ...
Authors:Yi, C., Chen, B., Qi, B., Zhang, W., Jia, G., Zhang, L., Li, C., Dinner, A., Yang, C., He, C.
Deposit date:2011-05-11
Release date:2012-06-06
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
3RZJ
  • Download 3rzj
  • View 3rzj
Molmil generated image of 3rzj
DUPLEX INTERROGATION BY A DIRECT DNA REPAIR PROTEIN IN THE SEARCH OF DAMAGE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, 5'-D(*CP*TP*GP*TP*CP*TP*(ME6)P*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*GP*AP*GP*AP*CP*A)-3', ...
Authors:Yi, C., Chen, B., Qi, B., Zhang, W., Jia, G., Zhang, L., Li, C., Dinner, A., Yang, C., He, C.
Deposit date:2011-05-11
Release date:2012-06-06
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
3RZK
  • Download 3rzk
  • View 3rzk
Molmil generated image of 3rzk
DUPLEX INTERROGATION BY A DIRECT DNA REPAIR PROTEIN IN THE SEARCH OF DAMAGE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, 5'-D(*CP*TP*GP*TP*CP*TP*(EDA)P*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*TP*AP*GP*AP*CP*A)-3', ...
Authors:Yi, C., Chen, B., Qi, B., Zhang, W., Jia, G., Zhang, L., Li, C., Dinner, A., Yang, C., He, C.
Deposit date:2011-05-11
Release date:2012-06-06
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
3RZL
  • Download 3rzl
  • View 3rzl
Molmil generated image of 3rzl
DUPLEX INTERROGATION BY A DIRECT DNA REPAIR PROTEIN IN THE SEARCH OF DAMAGE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, 5'-D(*AP*TP*GP*TP*AP*TP*CP*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*IP*AP*TP*AP*CP*A)-3', ...
Authors:Yi, C., Chen, B., Qi, B., Zhang, W., Jia, G., Zhang, L., Li, C., Dinner, A., Yang, C., He, C.
Deposit date:2011-05-11
Release date:2012-06-06
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
3RZM
  • Download 3rzm
  • View 3rzm
Molmil generated image of 3rzm
DUPLEX INTERROGATION BY A DIRECT DNA REPAIR PROTEIN IN THE SEARCH OF DAMAGE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, 5'-D(*AP*TP*GP*TP*AP*TP*AP*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*TP*AP*TP*AP*CP*A)-3', ...
Authors:Yi, C., Chen, B., Qi, B., Zhang, W., Jia, G., Zhang, L., Li, C., Dinner, A., Yang, C., He, C.
Deposit date:2011-05-11
Release date:2012-06-06
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (3.06 Å)
Cite:Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
3O1M
  • Download 3o1m
  • View 3o1m
Molmil generated image of 3o1m
IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*T*AP*GP*GP*TP*AP*AP*(ME6)P*AP*CP*CP*GP*T)-3'), DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
Authors:Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.
Deposit date:2010-07-21
Release date:2010-11-17
Last modified:2014-05-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O1O
  • Download 3o1o
  • View 3o1o
Molmil generated image of 3o1o
IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*T*AP*GP*GP*TP*AP*AP*(MFT)P*AP*CP*CP*GP*T)-3'), DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
Authors:Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.
Deposit date:2010-07-21
Release date:2010-11-17
Last modified:2014-05-28
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase
Nature, 468, 2010
3O1P
  • Download 3o1p
  • View 3o1p
Molmil generated image of 3o1p
IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*T*AP*GP*GP*TP*AP*AP*(EDA)P*AP*CP*CP*GP*T)-3'), DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
Authors:Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.
Deposit date:2010-07-21
Release date:2010-11-17
Last modified:2014-05-28
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O1R
  • Download 3o1r
  • View 3o1r
Molmil generated image of 3o1r
IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*GP*GP*TP*AP*AP*(MDK)P*AP*CP*CP*GP*T)-3'), DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
Authors:Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.
Deposit date:2010-07-21
Release date:2010-11-17
Last modified:2014-05-28
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O1S
  • Download 3o1s
  • View 3o1s
Molmil generated image of 3o1s
IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*GP*GP*TP*AP*AP*(MDQ)P*AP*CP*CP*GP*T)-3'), DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
Authors:Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.
Deposit date:2010-07-22
Release date:2010-11-17
Last modified:2014-05-28
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O1T
  • Download 3o1t
  • View 3o1t
Molmil generated image of 3o1t
IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*GP*GP*TP*AP*AP*(MDU)P*AP*CP*CP*GP*T)-3'), DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
Authors:Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.
Deposit date:2010-07-22
Release date:2010-11-17
Last modified:2014-05-28
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O1U
  • Download 3o1u
  • View 3o1u
Molmil generated image of 3o1u
IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*GP*GP*TP*AP*AP*(MDV)P*AP*CP*CP*GP*T)-3'), DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
Authors:Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.
Deposit date:2010-07-22
Release date:2010-11-17
Last modified:2014-05-28
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3O1V
  • Download 3o1v
  • View 3o1v
Molmil generated image of 3o1v
IRON-CATALYZED OXIDATION INTERMEDIATES CAPTURED IN A DNA REPAIR DIOXYGENASE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase AlkB, DNA (5'-D(*AP*GP*GP*TP*AP*AP*(MDJ)P*AP*CP*CP*GP*T)-3'), DNA (5'-D(*AP*AP*CP*GP*GP*TP*AP*TP*TP*AP*CP*CP*T)-3'), ...
Authors:Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.
Deposit date:2010-07-22
Release date:2010-11-17
Last modified:2014-05-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Iron-catalysed oxidation intermediates captured in a DNA repair dioxygenase.
Nature, 468, 2010
3S57
  • Download 3s57
  • View 3s57
Molmil generated image of 3s57
ABH2 CROSS-LINKED WITH UNDAMAGED DSDNA-1 CONTAINING COFACTORS
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, 5'-D(*CP*TP*GP*TP*CP*AP*TP*CP*AP*CP*TP*GP*CP*G)-3', 5'-D(*TP*CP*GP*CP*AP*GP*TP*GP*AP*TP*GP*AP*CP*A)-3', ...
Authors:Yi, C., Chen, B., Qi, B., Ramirez, B., Zhang, W., Jia, G., Zhang, L., Li, C.Q., Dinner, A.R., Yang, C.-G., He, C.
Deposit date:2011-05-20
Release date:2012-06-06
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
3S5A
  • Download 3s5a
  • View 3s5a
Molmil generated image of 3s5a
ABH2 CROSS-LINKED TO UNDAMAGED DSDNA-2 WITH COFACTORS
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, 5'-D(*CP*TP*GP*TP*CP*TP*CP*AP*CP*TP*GP*TP*CP*G)-3', 5'-D(*TP*CP*GP*AP*CP*AP*GP*TP*GP*AP*GP*AP*CP*A)-3', ...
Authors:Yi, C., Chen, B., Qi, B., Ramirez, B., Zhang, W., Jia, G., Zhang, L., Li, C.Q., Dinner, A.R., Yang, C.-G., He, C.
Deposit date:2011-05-21
Release date:2012-06-06
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Duplex interrogation by a direct DNA repair protein in search of base damage
Nat.Struct.Mol.Biol., 19, 2012
3BKZ
  • Download 3bkz
  • View 3bkz
Molmil generated image of 3bkz
X-RAY STRUCTURE OF E COLI ALKB CROSSLINKED TO DSDNA IN THE ACTIVE SITE
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB, DNA (5'-D(*DTP*DAP*DGP*DGP*DTP*DAP*DAP*DCP*DAP*DTP*DCP*DGP*DT)-3'), DNA (5'-D(*DAP*DAP*DCP*DGP*DAP*DTP*DAP*DTP*DTP*DAP*DCP*DCP*DT)-3'), ...
Authors:Yi, C., Yang, C.-G., He, C.
Deposit date:2007-12-09
Release date:2008-04-22
Last modified:2014-05-28
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA
Nature, 452, 2008
3BI3
  • Download 3bi3
  • View 3bi3
Molmil generated image of 3bi3
X-RAY STRUCTURE OF ALKB PROTEIN BOUND TO DSDNA CONTAINING 1MEA/A WITH COFACTORS
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB, DNA (5'-D(*TP*AP*GP*GP*TP*AP*AP*(MA7)P*AP*(2YR)P*CP*GP*T)-3'), DNA (5'-D(*DAP*DAP*DCP*DGP*DGP*DTP*DAP*DTP*DTP*DAP*DCP*DCP*DT)-3'), ...
Authors:Yi, C., Yang, C.-G.
Deposit date:2007-11-29
Release date:2008-04-22
Last modified:2014-05-21
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA.
Nature, 452, 2008
3BIE
  • Download 3bie
  • View 3bie
Molmil generated image of 3bie
X-RAY STRUCTURE OF E COLI ALKB BOUND TO DSDNA CONTAINING 1MEA/T WITH MN AND 2KG
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB, DNA (5'-D(P*DAP*DGP*DGP*DTP*DAP*DAP*(MA7)P*DAP*DCP*DCP*DGP*DT)-3'), DNA (5'-D(*DAP*DAP*DCP*DGP*DGP*DTP*DTP*DTP*DTP*DAP*DCP*DCP*DT)-3'), ...
Authors:Yi, C., Yang, C.-G.
Deposit date:2007-11-30
Release date:2008-04-22
Last modified:2014-05-28
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA
Nature, 452, 2008
4GXO
  • Download 4gxo
  • View 4gxo
Molmil generated image of 4gxo
CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS PROTEIN SARZ MUTANT C13E
Descriptor:MarR family regulatory protein, GLYCEROL
Authors:Sun, F., Ding, Y., Ji, Q., Liang, Z., Deng, X., Wong, C.C., Yi, C., Zhang, L., Xie, S., Alvarez, S., Hicks, L.M., Luo, C., Jiang, H., Lan, L., He, C.
Deposit date:2012-09-04
Release date:2012-09-26
Last modified:2012-10-03
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Protein cysteine phosphorylation of SarA/MgrA family transcriptional regulators mediates bacterial virulence and antibiotic resistance.
Proc.Natl.Acad.Sci.USA, 109, 2012
3BTX
  • Download 3btx
  • View 3btx
Molmil generated image of 3btx
X-RAY STRUCTURE OF HUMAN ABH2 BOUND TO DSDNA THROUGH ACTIVE SITE CROSS-LINKING
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, DNA (5'-D(*CP*TP*GP*TP*AP*TP*(2YR)P*AP*TP*TP*GP*CP*G)-3'), DNA (5'-D(*DTP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DAP*DTP*DAP*DCP*DA)-3'), ...
Authors:Yang, C.-G., Yi, C., He, C.
Deposit date:2007-12-31
Release date:2008-04-22
Last modified:2014-05-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA.
Nature, 452, 2008
3BTY
  • Download 3bty
  • View 3bty
Molmil generated image of 3bty
CRYSTAL STRUCTURE OF HUMAN ABH2 BOUND TO DSDNA CONTAINING 1MEA THROUGH CROSS-LINKING AWAY FROM ACTIVE SITE
Descriptor:DNA (5'-D(*DCP*DTP*DGP*DTP*DAP*DTP*(MA7)P*DAP*DCP*DTP*DGP*DCP*DG)-3'), DNA (5'-D(*DTP*DCP*DGP*DCP*DAP*DGP*DTP*DTP*DAP*DTP*DAP*DCP*DA)-3'), Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, ...
Authors:Yang, C.-G., Yi, C., He, C.
Deposit date:2007-12-31
Release date:2008-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA.
Nature, 452, 2008
3BTZ
  • Download 3btz
  • View 3btz
Molmil generated image of 3btz
CRYSTAL STRUCTURE OF HUMAN ABH2 CROSS-LINKED TO DSDNA
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, DNA (5'-D(*AP*GP*GP*TP*GP*AP*(2YR)P*AP*AP*TP*GP*CP*G)-3'), DNA (5'-D(*DTP*DCP*DGP*DCP*DAP*DTP*DTP*DAP*DTP*DCP*DAP*DCP*DC)-3')
Authors:Yang, C.-G., Yi, C., He, C.
Deposit date:2007-12-31
Release date:2008-04-22
Last modified:2014-05-21
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA.
Nature, 452, 2008
3BU0
  • Download 3bu0
  • View 3bu0
Molmil generated image of 3bu0
CRYSTAL STRUCTURE OF HUMAN ABH2 CROSS-LINKED TO DSDNA WITH COFACTORS
Descriptor:Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, DNA (5'-D(*CP*TP*GP*TP*AP*TP*(2YR)P*AP*TP*TP*GP*CP*G)-3'), DNA (5'-D(*DTP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DAP*DTP*DAP*DCP*DA)-3'), ...
Authors:Yang, C.-G., Yi, C., He, C.
Deposit date:2007-12-31
Release date:2008-04-22
Last modified:2014-05-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA.
Nature, 452, 2008
3BUC
  • Download 3buc
  • View 3buc
Molmil generated image of 3buc
X-RAY STRUCTURE OF HUMAN ABH2 BOUND TO DSDNA WITH MN(II) AND 2KG
Descriptor:DNA (5'-D(*DCP*DTP*DGP*DTP*DAP*DTP*(MA7)P*DAP*DCP*DTP*DGP*DCP*DG)-3'), DNA (5'-D(*DTP*DCP*DGP*DCP*DAP*DGP*DTP*DTP*DAP*DTP*DAP*DCP*DA)-3'), Alpha-ketoglutarate-dependent dioxygenase alkB homolog 2, ...
Authors:Yang, C.-G., Yi, C., He, C.
Deposit date:2008-01-02
Release date:2008-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structures of DNA/RNA repair enzymes AlkB and ABH2 bound to dsDNA.
Nature, 452, 2008
<123>