Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2QDL
DownloadVisualize
BU of 2qdl by Molmil
Crystal structure of scaffolding protein TtCheW from Thermoanaerobacter tengcongensis
Descriptor: Chemotaxis signal transduction protein, GLYCEROL
Authors:Yao, W, Shi, L, Liang, D.C.
Deposit date:2007-06-21
Release date:2007-09-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of scaffolding protein CheW from thermoanaerobacter tengcongensis.
Biochem.Biophys.Res.Commun., 361, 2007
1NPA
DownloadVisualize
BU of 1npa by Molmil
crystal structure of HIV-1 protease-hup
Descriptor: (3S)-TETRAHYDROFURAN-3-YL (1R,2S)-3-[4-((1R)-2-{[(S)-AMINO(HYDROXY)METHYL]OXY}-2,3-DIHYDRO-1H-INDEN-1-YL)-2-BENZYL-3-OXOPYRROLIDIN-2-YL]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE, POL polyprotein
Authors:Smith III, A.B, Hirschmann, R, Pasternak, A, Yao, W, Sprengeler, P.A, Holloway, M.K, Kuo, L.C, Chen, Z, Darke, P.L, Schleif, W.A.
Deposit date:2003-01-17
Release date:2004-01-27
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:An orally bioavailable pyrrolinone inhibitor of HIV-1 protease: computational analysis and X-ray crystal structure of the enzyme complex.
J.MED.CHEM., 40, 1997
5B25
DownloadVisualize
BU of 5b25 by Molmil
Crystal structure of human PDE1B with inhibitor 3
Descriptor: (11R,15S)-4-{[4-(6-fluoropyridin-2-yl)phenyl]methyl}-8-methyl-5-(phenylamino)-1,3,4,8,10-pentaazatetracyclo[7.6.0.02,6.011,15]pentadeca-2,5,9-trien-7-one, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B, GLYCEROL, ...
Authors:Ida, K, Lane, W, Snell, G, Sogabe, S.
Deposit date:2016-01-07
Release date:2016-02-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery of Potent and Selective Inhibitors of Phosphodiesterase 1 for the Treatment of Cognitive Impairment Associated with Neurodegenerative and Neuropsychiatric Diseases
J.Med.Chem., 59, 2016
1NPW
DownloadVisualize
BU of 1npw by Molmil
Crystal structure of HIV protease complexed with LGZ479
Descriptor: CARBAMIC ACID 1-{5-BENZYL-5-[2-HYDROXY-4-PHENYL-3-(TETRAHYDRO-FURAN- 3-YLOXYCARBONYLAMINO)-BUTYL]-4-OXO-4,5-DIHYDRO-1H-PYRROL-3-YL}- INDAN-2-YL ESTER, POL polyprotein
Authors:Smith III, A.B.
Deposit date:2003-01-20
Release date:2003-02-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design, synthesis, and biological evaluation of monopyrrolinone-based HIV-1 protease inhibitors.
J.Med.Chem., 46, 2003
7F65
DownloadVisualize
BU of 7f65 by Molmil
Bacetrial Cocaine Esterase with mutations T172R/G173Q/V116K/S117A/A51L, bound to benzoic acid
Descriptor: BENZOIC ACID, Cocaine esterase, SULFATE ION
Authors:Ouyang, P.F, Zhang, Y, Tong, J.
Deposit date:2021-06-24
Release date:2021-09-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:Computational Design and Crystal Structure of a Highly Efficient Benzoylecgonine Hydrolase.
Angew.Chem.Int.Ed.Engl., 60, 2021
8UV0
DownloadVisualize
BU of 8uv0 by Molmil
Discovery of (4-Pyrazolyl)-2-Aminopyrimidines as Potent and Selective Inhibitors of Cyclin-Dependent Kinase 2
Descriptor: 1-{(4M)-4-[2-{[1-(cyclopropanesulfonyl)piperidin-4-yl]amino}-5-(trifluoromethyl)pyrimidin-4-yl]-1H-pyrazol-1-yl}-2-methylpropan-2-ol, Cyclin-dependent kinase 2
Authors:Deller, M.C, Epling, L.B.
Deposit date:2023-11-02
Release date:2024-02-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery of (4-Pyrazolyl)-2-aminopyrimidines as Potent and Selective Inhibitors of Cyclin-Dependent Kinase 2.
J.Med.Chem., 67, 2024
8E1X
DownloadVisualize
BU of 8e1x by Molmil
FGFR2 kinase domain in complex with a Pyrazolo[1,5-a]pyrimidine analog (Compound 29)
Descriptor: (5M)-N-methyl-5-{(6M,8S)-5-{[(3S)-oxolan-3-yl]amino}-6-[1-(propan-2-yl)-1H-pyrazol-3-yl]pyrazolo[1,5-a]pyrimidin-3-yl}pyridine-3-carboxamide, Fibroblast growth factor receptor 2
Authors:Lei, H.-T, Epling, L.B, Deller, M.C.
Deposit date:2022-08-11
Release date:2022-11-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Discovery of Potent and Selective Inhibitors of Wild-Type and Gatekeeper Mutant Fibroblast Growth Factor Receptor (FGFR) 2/3.
J.Med.Chem., 65, 2022
2JOH
DownloadVisualize
BU of 2joh by Molmil
NMR structure of rabbit prion protein mutation S173N
Descriptor: Major prion protein
Authors:Li, J, Lin, D.
Deposit date:2007-03-13
Release date:2008-02-19
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Unique structural characteristics of the rabbit prion protein.
J.Biol.Chem., 285, 2010
2JOM
DownloadVisualize
BU of 2jom by Molmil
NMR structure of rabbit prion protein mutation I214V
Descriptor: Major prion protein
Authors:Li, J, Lin, D.
Deposit date:2007-03-14
Release date:2008-01-29
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Solution Structure and Dynamics of the I214V Mutant of the Rabbit Prion Protein.
Plos One, 5, 2010
2FJ3
DownloadVisualize
BU of 2fj3 by Molmil
NMR solution of rabbit Prion Protein (91-228)
Descriptor: Major prion protein
Authors:Li, J, Lin, D.H.
Deposit date:2005-12-31
Release date:2006-12-31
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Unique structural characteristics of the rabbit prion protein
J.Biol.Chem., 285, 2010
5XMC
DownloadVisualize
BU of 5xmc by Molmil
Crystal structure of the auto-inhibited Nedd4 family E3 ligase Itch
Descriptor: E3 ubiquitin-protein ligase Itchy
Authors:Shan, Z, Wen, W.
Deposit date:2017-05-13
Release date:2017-08-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Allosteric auto-inhibition and activation of the Nedd4 family E3 ligase Itch
EMBO Rep., 18, 2017
5YQG
DownloadVisualize
BU of 5yqg by Molmil
The structure of 14-3-3 and pNumb peptide
Descriptor: 14-3-3 protein eta, Peptide from Protein numb homolog
Authors:Chen, X, Liu, Z, Wen, W.
Deposit date:2017-11-06
Release date:2018-02-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural determinants controlling 14-3-3 recruitment to the endocytic adaptor Numb and dissociation of the Numb/alpha-adaptin complex.
J. Biol. Chem., 293, 2018
1NPV
DownloadVisualize
BU of 1npv by Molmil
Crystal structure of HIV-1 protease complexed with LDC271
Descriptor: POL polyprotein, {1-BENZYL-3-[2-BENZYL-3-OXO-4-(1-OXO-1,2,3,4-TETRAHYDRO- ISOQUINOLIN-4-YL)-2,3-DIHYDRO-1H-PYRROL-2-YL]-2- HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL ESTER
Authors:Smith, A.B.
Deposit date:2003-01-20
Release date:2003-02-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design, synthesis, and biological evaluation of monopyrrolinone-based HIV-1 protease inhibitors.
J.Med.Chem., 46, 2003
6J1Z
DownloadVisualize
BU of 6j1z by Molmil
WWP2 semi-open conformation
Descriptor: NEDD4-like E3 ubiquitin-protein ligase WWP2
Authors:Liu, Z.H.
Deposit date:2018-12-30
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A multi-lock inhibitory mechanism for fine-tuning enzyme activities of the HECT family E3 ligases.
Nat Commun, 10, 2019
6J1X
DownloadVisualize
BU of 6j1x by Molmil
WWP1 close conformation
Descriptor: GLYCEROL, NEDD4-like E3 ubiquitin-protein ligase WWP1
Authors:Liu, Z.H.
Deposit date:2018-12-30
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A multi-lock inhibitory mechanism for fine-tuning enzyme activities of the HECT family E3 ligases.
Nat Commun, 10, 2019
6J1Y
DownloadVisualize
BU of 6j1y by Molmil
Semi-open conformation E3 ligase
Descriptor: GLYCEROL, NEDD4-like E3 ubiquitin-protein ligase WWP1
Authors:Liu, Z.H.
Deposit date:2018-12-30
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:A multi-lock inhibitory mechanism for fine-tuning enzyme activities of the HECT family E3 ligases.
Nat Commun, 10, 2019
1HL6
DownloadVisualize
BU of 1hl6 by Molmil
A novel mode of RBD-protein recognition in the Y14-mago complex
Descriptor: CG8781 PROTEIN, MAGO NASHI PROTEIN
Authors:Fribourg, S, Gatfield, D, Yao, W, Izaurralde, E, Conti, E.
Deposit date:2003-03-13
Release date:2003-05-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A Novel Mode of Rbd-Protein Recognition in the Y14-Mago Complex
Nat.Struct.Biol., 10, 2003
8HOA
DownloadVisualize
BU of 8hoa by Molmil
ScRIPK mutant K124R
Descriptor: (2R,5R)-hexane-2,5-diol, ADENOSINE-5'-TRIPHOSPHATE, FORMIC ACID, ...
Authors:Fang, J.L, Zhang, M.Q, Ming, Z.H.
Deposit date:2022-12-09
Release date:2023-10-18
Method:X-RAY DIFFRACTION (1.676 Å)
Cite:Receptor-like cytoplasmic kinase ScRIPK in sugarcane regulates disease resistance and drought tolerance in Arabidopsis.
Front Plant Sci, 14, 2023
8HOD
DownloadVisualize
BU of 8hod by Molmil
ScRIPK MUTANT-S253A, T254A
Descriptor: ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, Hypothetical protein
Authors:Fang, J.L, Zhang, M.Q.
Deposit date:2022-12-09
Release date:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Receptor-like cytoplasmic kinase ScRIPK in sugarcane regulates disease resistance and drought tolerance in Arabidopsis.
Front Plant Sci, 14, 2023
8HO6
DownloadVisualize
BU of 8ho6 by Molmil
ScRIPK WT
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ScRIPK kinase protein
Authors:Fang, J.L, Zhang, M.Q.
Deposit date:2022-12-09
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Receptor-like cytoplasmic kinase ScRIPK in sugarcane regulates disease resistance and drought tolerance in Arabidopsis.
Front Plant Sci, 14, 2023
7D4G
DownloadVisualize
BU of 7d4g by Molmil
A proof of concept for neutralizing antibody-guided vaccine design against SARS-CoV-2
Descriptor: Heavy chain of FC05 Fab, Light chain of FC05 Fab, Spike glycoprotein S1
Authors:Cao, L, Wang, X.
Deposit date:2020-09-23
Release date:2021-04-07
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:A proof of concept for neutralizing antibody-guided vaccine design against SARS-CoV-2.
Natl Sci Rev, 8, 2021
7DX4
DownloadVisualize
BU of 7dx4 by Molmil
The structure of FC08 Fab-hA.CE2-RBD complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Heavy chain of FC08 Fab, ...
Authors:Cao, L, Wang, X.
Deposit date:2021-01-18
Release date:2021-04-21
Last modified:2022-02-23
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A proof of concept for neutralizing antibody-guided vaccine design against SARS-CoV-2.
Natl Sci Rev, 8, 2021

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon