Author results

1BVE
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HIV-1 PROTEASE-DMP323 COMPLEX IN SOLUTION, NMR, 28 STRUCTURES
分子名称:HIV-1 PROTEASE, [4-R-(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO-5,6-BIS(HYDROXY)-[1,3-BIS([4-HYDROXYMETHYL-PHENYL]METHYL)-4,7-BIS(PHENYLMETHYL)]-2H-1,3-DIAZEPINONE
著者Yamazaki, T., Hinck, A.P., Wang, Y.-X., Nicholson, L.K., Torchia, D.A., Wingfield, P., Stahl, S.J., Kaufman, J.D., Chang, C., Domaille, P.J., Lam, P.Y.S.
登録日1996-01-16
公開日1996-08-17
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of the HIV-1 protease complexed with DMP323, a novel cyclic urea-type inhibitor, determined by nuclear magnetic resonance spectroscopy.
Protein Sci., 5, 1996
1BVG
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HIV-1 PROTEASE-DMP323 COMPLEX IN SOLUTION, NMR MINIMIZED AVERAGE STRUCTURE
分子名称:HIV-1 PROTEASE, [4-R-(-4-ALPHA,5-ALPHA,6-BETA,7-BETA)]-HEXAHYDRO-5,6-BIS(HYDROXY)-[1,3-BIS([4-HYDROXYMETHYL-PHENYL]METHYL)-4,7-BIS(PHENYLMETHYL)]-2H-1,3-DIAZEPINONE
著者Yamazaki, T., Hinck, A.P., Wang, Y.-X., Nicholson, L.K., Torchia, D.A., Wingfield, P., Stahl, S.J., Kaufman, J.D., Chang, C., Domaille, P.J., Lam, P.Y.S.
登録日1996-01-16
公開日1996-08-17
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Three-dimensional solution structure of the HIV-1 protease complexed with DMP323, a novel cyclic urea-type inhibitor, determined by nuclear magnetic resonance spectroscopy.
Protein Sci., 5, 1996
1JU8
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SOLUTION STRUCTURE OF LEGINSULIN, A PLANT HORMON
分子名称:Leginsulin
著者Yamazaki, T., Takaoka, M., Katoh, E., Hanada, K., Sakita, M., Sakata, K., Nishiuchi, Y., Hirano, H.
登録日2001-08-23
公開日2003-06-17
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献A possible physiological function and the tertiary structure of a 4-kDa peptide in legumes
EUR.J.BIOCHEM., 270, 2003
1RCH
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SOLUTION NMR STRUCTURE OF RIBONUCLEASE HI FROM ESCHERICHIA COLI, 8 STRUCTURES
分子名称:RIBONUCLEASE HI
著者Yamazaki, T., Fujiwara, M., Kato, T., Yamasaki, K., Nagayama, K.
登録日1995-06-23
公開日1997-02-12
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution Structure of Ribonuclease Hi from Escherichia Coli
Biol.Pharm.Bull., 23, 2000
1IRZ
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SOLUTION STRUCTURE OF ARR10-B BELONGING TO THE GARP FAMILY OF PLANT MYB-RELATED DNA BINDING MOTIFS OF THE ARABIDOPSIS RESPONSE REGULATORS
分子名称:ARR10-B
著者Yamazaki, T., Katoh, E., Hosoda, K., Mizuno, T.
登録日2001-10-25
公開日2003-02-11
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Molecular structure of the GARP family of plant Myb-related DNA binding motifs of the Arabidopsis response regulators
PLANT CELL, 14, 2003
1C9F
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NMR STRUCTURE OF THE CAD DOMAIN OF CASPASE-ACTIVATED DNASE
分子名称:CASPASE-ACTIVATED DNASE
著者Yamazaki, T., Uegaki, K.
登録日1999-08-02
公開日2000-02-16
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Structure of the CAD domain of caspase-activated DNase and interaction with the CAD domain of its inhibitor.
J.Mol.Biol., 297, 2000
1AYG
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SOLUTION STRUCTURE OF CYTOCHROME C-552, NMR, 20 STRUCTURES
分子名称:CYTOCHROME C-552, HEME C
著者Hasegawa, J., Yoshida, T., Yamazaki, T., Sambongi, Y., Yu, Y., Igarashi, Y., Kodama, T., Yamazaki, K., Hakusui, H., Kyogoku, Y., Kobayashi, Y.
登録日1997-11-04
公開日1998-11-25
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution structure of thermostable cytochrome c-552 from Hydrogenobacter thermophilus determined by 1H-NMR spectroscopy.
Biochemistry, 37, 1998
1DCJ
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SOLUTION STRUCTURE OF YHHP, A NOVEL ESCHERICHIA COLI PROTEIN IMPLICATED IN THE CELL DIVISION
分子名称:YHHP PROTEIN
著者Katoh, E., Hatta, T., Shindo, H., Mizuno, T., Yamazaki, T.
登録日1999-11-05
公開日2001-07-18
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献High precision NMR structure of YhhP, a novel Escherichia coli protein implicated in cell division.
J.Mol.Biol., 304, 2000
1F2R
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NMR STRUCTURE OF THE HETERODIMERIC COMPLEX BETWEEN CAD DOMAINS OF CAD AND ICAD
分子名称:CASPASE-ACTIVATED DNASE, INHIBITOR OF CASPASE-ACTIVATED DNASE
著者Otomo, T., Sakahira, H., Uegaki, K., Nagata, S., Yamazaki, T.
登録日2000-05-29
公開日2000-06-08
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Structure of the heterodimeric complex between CAD domains of CAD and ICAD.
Nat.Struct.Biol., 7, 2000
2RQF
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SOLUTION STRUCTURE OF JUVENILE HORMONE BINDING PROTEIN FROM SILKWORM IN COMPLEX WITH JH III
分子名称:Hemolymph juvenile hormone binding protein, methyl (2E,6E)-9-[(2R)-3,3-dimethyloxiran-2-yl]-3,7-dimethylnona-2,6-dienoate
著者Suzuki, R., Fujimoto, Z., Shiotsuki, T., Momma, M., Tase, A., Yamazaki, T.
登録日2009-04-27
公開日2010-05-05
最終更新日2013-06-19
実験手法SOLUTION NMR
主引用文献Structural mechanism of JH delivery in hemolymph by JHBP of silkworm, Bombyx mori
Sci Rep, 1, 2011
3A1Z
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CRYSTAL STRUCTURE OF JUVENILE HORMONE BINDING PROTEIN FROM SILKWORM
分子名称:Hemolymph juvenile hormone binding protein, ZINC ION, (4S)-2-METHYL-2,4-PENTANEDIOL
著者Suzuki, R., Fujimoto, Z., Shiotsuki, T., Momma, M., Tase, A., Yamazaki, T.
登録日2009-04-27
公開日2010-04-28
最終更新日2017-03-15
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Crystal structure of silkworm Bombyx mori JHBP in complex with 2-methyl-2,4-pentanediol: plasticity of JH-binding pocket and ligand-induced conformational change of the second cavity in JHBP
Plos One, 8, 2013
3AOS
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CRYSTAL STRUCTURE OF JUVENILE HORMONE BINDING PROTEIN FROM SILKWORM IN COMPLEX WITH JH II
分子名称:Hemolymph juvenile hormone binding protein, methyl (2E,6E)-9-[(2R,3S)-3-ethyl-3-methyloxiran-2-yl]-3,7-dimethylnona-2,6-dienoate
著者Fujimoto, Z., Suzuki, R., Shiotsuki, T., Momma, M., Yamazaki, T.
登録日2010-10-06
公開日2011-10-12
最終更新日2013-06-19
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural mechanism of JH delivery in hemolymph by JHBP of silkworm, Bombyx mori
Sci Rep, 1, 2011
3AOT
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CRYSTAL STRUCTURE OF JUVENILE HORMONE BINDING PROTEIN FROM SILKWORM IN ITS APO FORM
分子名称:Hemolymph juvenile hormone binding protein, TETRAETHYLENE GLYCOL, TRIETHYLENE GLYCOL, ...
著者Fujimoto, Z., Suzuki, R., Shiotsuki, T., Momma, M., Yamazaki, T.
登録日2010-10-06
公開日2011-10-12
最終更新日2013-06-19
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural mechanism of JH delivery in hemolymph by JHBP of silkworm, Bombyx mori.
Sci Rep, 1, 2011
1C4L
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SOLUTION STRUCTURE OF AN RNA DUPLEX INCLUDING A C-U BASE-PAIR
分子名称:RNA (5'-R(*CP*GP*AP*CP*UP*CP*AP*GP*G)-3'), RNA (5'-R(*CP*CP*UP*GP*CP*GP*UP*CP*G)-3')
著者Tanaka, Y., Kojima, C., Yamazaki, T., Kodama, T.S., Yasuno, K., Miyashita, S., Ono, A.M., Ono, A.S., Kainosho, M., Kyogoku, Y.
登録日1999-08-30
公開日2000-08-09
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution structure of an RNA duplex including a C-U base pair.
Biochemistry, 39, 2000
1IY5
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SOLUTION STRUCTURE OF WILD TYPE OMSVP3
分子名称:OMSVP3
著者Hemmi, H., Kumazaki, T., Yamazaki, T., Kojima, S., Yoshida, T., Kyogoku, Y., Katsu, M., Yokosawa, H., Miura, K., Kobayashi, Y.
登録日2002-07-23
公開日2003-03-11
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Inhibitory Specificity Change of Ovomucoid Third Domain of the Silver Pheasant upon Introduction of an Engineered Cys14-Cys39 Bond
BIOCHEMISTRY, 42, 2003
1IY6
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SOLUTION STRUCTURE OF OMSVP3 VARIANT, P14C/N39C
分子名称:OMSVP3
著者Hemmi, H., Kumazaki, T., Yamazaki, T., Kojima, S., Yoshida, T., Kyogoku, Y., Katsu, M., Yokosawa, H., Miura, K., Kobayashi, Y.
登録日2002-07-23
公開日2003-03-11
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Inhibitory Specificity Change of Ovomucoid Third Domain of the Silver Pheasant upon Introduction of an Engineered Cys14-Cys39 Bond
BIOCHEMISTRY, 42, 2003
1K2G
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STRUCTURAL BASIS FOR THE 3'-TERMINAL GUANOSINE RECOGNITION BY THE GROUP I INTRON
分子名称:5'-R(*CP*AP*GP*AP*CP*UP*UP*CP*GP*GP*UP*CP*GP*CP*AP*GP*AP*GP*AP*UP*GP*G)-3'
著者Kitamura, Y., Muto, Y., Watanabe, S., Kim, I., Ito, T., Nishiya, Y., Sakamoto, K., Ohtsuki, T., Kawai, G., Watanabe, K., Hosono, K., Takaku, H., Katoh, E., Yamazaki, T., Inoue, T., Yokoyama, S.
登録日2001-09-27
公開日2002-05-08
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution structure of an RNA fragment with the P7/P9.0 region and the 3'-terminal guanosine of the tetrahymena group I intron.
RNA, 8, 2002
1WFF
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SOLUTION STRUCTURE OF THE ZF-AN1 DOMAIN FROM MOUSE RIKEN CDNA 2810002D23 PROTEIN
分子名称:RIKEN cDNA 2810002D23 protein, ZINC ION
著者Tomizawa, T., Kigawa, T., Izumi, K., Yoshida, M., Yamazaki, T., Inoue, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-26
公開日2004-11-26
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution structure of the zf-AN1 domain from mouse RIKEN cDNA 2810002D23 protein
To be Published
1WIF
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THE SOLUTION STRUCTURE OF RSGI RUH-020, A PDZ DOMAIN OF HYPOTHETICAL PROTEIN FROM MOUSE
分子名称:RIKEN cDNA 4930408O21
著者Ohashi, W., Yamazaki, T., Hirota, H., Tomizawa, T., Koshiba, S., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-28
公開日2004-11-28
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献The solution structure of RSGI RUH-020, a PDZ domain of hypothetical protein from mouse
To be Published
2RS2
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1H, 13C, AND 15N CHEMICAL SHIFT ASSIGNMENTS FOR MUSASHI1 RBD1:R(GUAGU) COMPLEX
分子名称:RNA-binding protein Musashi homolog 1, RNA (5'-R(*GP*UP*AP*GP*U)-3')
著者Ohyama, T., Nagata, T., Tsuda, K., Imai, T., Okano, H., Yamazaki, T., Katahira, M.
登録日2011-06-27
公開日2011-12-28
実験手法SOLUTION NMR
主引用文献Structure of Musashi1 in a complex with target RNA: the role of aromatic stacking interactions
Nucleic Acids Res., 2011
1COO
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THE COOH-TERMINAL DOMAIN OF RNA POLYMERASE ALPHA SUBUNIT
分子名称:RNA POLYMERASE ALPHA SUBUNIT
著者Jeon, Y.H., Negishi, T., Shirakawa, M., Yamazaki, T., Fujita, N., Ishihama, A., Kyogoku, Y.
登録日1995-10-09
公開日1996-03-08
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Solution structure of the activator contact domain of the RNA polymerase alpha subunit.
Science, 270, 1995
1IRF
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INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称:INTERFERON REGULATORY FACTOR-2
著者Furui, J., Uegaki, K., Yamazaki, T., Shirakawa, M., Swindells, M.B., Harada, H., Taniguchi, T., Kyogoku, Y.
登録日1997-11-24
公開日1998-01-28
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family.
Structure, 6, 1998
1IRG
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INTERFERON REGULATORY FACTOR-2 DNA BINDING DOMAIN, NMR, 20 STRUCTURES
分子名称:INTERFERON REGULATORY FACTOR-2
著者Furui, J., Uegaki, K., Yamazaki, T., Shirakawa, M., Swindells, M.B., Harada, H., Taniguchi, T., Kyogoku, Y.
登録日1997-11-25
公開日1998-03-18
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family.
Structure, 6, 1998
1BXD
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NMR STRUCTURE OF THE HISTIDINE KINASE DOMAIN OF THE E. COLI OSMOSENSOR ENVZ
分子名称:PROTEIN (OSMOLARITY SENSOR PROTEIN (ENVZ)), PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
著者Tanaka, T., Saha, S.K., Tomomori, C., Ishima, R., Liu, D., Tong, K.I., Park, H., Dutta, R., Qin, L., Swindells, M.B., Yamazaki, T., Ono, A.M., Kainosho, M., Inouye, M., Ikura, M.
登録日1998-10-02
公開日1999-10-02
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献NMR structure of the histidine kinase domain of the E. coli osmosensor EnvZ.
Nature, 396, 1998
1DOQ
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THE C-TERMINAL DOMAIN OF THE RNA POLYMERASE ALPHA SUBUNIT FROM THERMUS THERMOPHILUS
分子名称:RNA POLYMERASE ALPHA SUBUNIT
著者Wada, T., Yamazaki, T., Kyogoku, Y.
登録日1999-12-21
公開日2000-01-05
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献The structure and the characteristic DNA binding property of the C-terminal domain of the RNA polymerase alpha subunit from Thermus thermophilus.
J.Biol.Chem., 275, 2000
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