Author results

1YOC
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CRYSTAL STRUCTURE OF GENOMICS APC5556
Descriptor:hypothetical protein PA1835, GLYCEROL
Authors:Dong, A., Evdokimova, E., Kudritskam, M., Zhang, R.G., Yakunin, A., Pai, E., Edwards, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-01-27
Release date:2005-03-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of genomics AFPA1835 by Sulfur SAD methods
To be Published
2RC3
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CRYSTAL STRUCTURE OF CBS DOMAIN, NE2398
Descriptor:CBS domain, BROMIDE ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Dong, A., Xu, X., Korniyenko, Y., Yakunin, A., Zheng, H., Walker, J.R., Edwards, A.M., Joachimiak, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-09-19
Release date:2007-10-02
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of CBS domain, NE2398.
To be Published
5D8M
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CRYSTAL STRUCTURE OF THE METAGENOMIC CARBOXYL ESTERASE MGS0156
Descriptor:Metagenomic carboxyl esterase MGS0156
Authors:Cui, H., Nocek, B., Tchigvintsev, A., Popovic, A., Savchenko, A., Joachimiak, A., Yakunin, A.
Deposit date:2015-08-17
Release date:2016-10-05
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of esterase (MGS0156)
To Be Published
2R8T
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CRYSTAL STRUCTURE OF THE FRUCTOSE 1,6-BISPHOSPHATASE GLPX FROM E.COLI IN THE COMPLEX WITH FRUCTOSE 1,6-BISPHOSPHATE
Descriptor:Fructose-1,6-bisphosphatase class II glpX, BETA-FRUCTOSE-1,6-DIPHOSPHATE, UNKNOWN ATOM OR ION
Authors:Lunin, V.V., Skarina, T., Brown, G., Yakunin, A., Edwards, A.M., Savchenko, A.
Deposit date:2007-09-11
Release date:2008-08-19
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the fructose 1,6-bisphosphatase GlpX from E.coli in the complex with fructose 1,6-bisphosphate
To be Published
3PF8
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CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE LJ0536
Descriptor:Cinnamoyl esterase, SODIUM ION
Authors:Stogios, P.J., Lai, K.K., Vu, C., Xu, X., Cui, H., Molloy, S., Gonzalez, C.F., Yakunin, A., Savchenko, A.
Deposit date:2010-10-28
Release date:2011-08-31
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:An Inserted alpha/beta Subdomain Shapes the Catalytic Pocket of Lactobacillus johnsonii Cinnamoyl Esterase
Plos One, 6, 2011
3PF9
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CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE LJ0536 S106A MUTANT
Descriptor:Cinnamoyl esterase, SODIUM ION
Authors:Stogios, P.J., Lai, K.K., Vu, C., Xu, X., Cui, H., Molloy, S., Gonzalez, C.F., Yakunin, A., Savchenko, A.
Deposit date:2010-10-28
Release date:2011-08-31
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:An Inserted alpha/beta Subdomain Shapes the Catalytic Pocket of Lactobacillus johnsonii Cinnamoyl Esterase
Plos One, 6, 2011
3PFB
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CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE LJ0536 S106A MUTANT IN COMPLEX WITH ETHYLFERULATE
Descriptor:Cinnamoyl esterase, AMMONIUM ION, CHLORIDE ION, ...
Authors:Stogios, P.J., Lai, K.K., Vu, C., Xu, X., Cui, H., Molloy, S., Gonzalez, C.F., Yakunin, A., Savchenko, A.
Deposit date:2010-10-28
Release date:2011-08-31
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:An Inserted alpha/beta Subdomain Shapes the Catalytic Pocket of Lactobacillus johnsonii Cinnamoyl Esterase
Plos One, 6, 2011
3PFC
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CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE LJ0536 S106A MUTANT IN COMPLEX WITH FERULIC ACID
Descriptor:Cinnamoyl esterase, 3-(4-HYDROXY-3-METHOXYPHENYL)-2-PROPENOIC ACID, SODIUM ION, ...
Authors:Stogios, P.J., Lai, K.K., Vu, C., Xu, X., Cui, H., Molloy, S., Gonzalez, C.F., Yakunin, A., Savchenko, A.
Deposit date:2010-10-28
Release date:2011-08-31
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:An Inserted alpha/beta Subdomain Shapes the Catalytic Pocket of Lactobacillus johnsonii Cinnamoyl Esterase
Plos One, 6, 2011
3QM1
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CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE LJ0536 S106A MUTANT IN COMPLEX WITH ETHYLFERULATE, FORM II
Descriptor:Cinnamoyl esterase, ethyl (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2-enoate, SODIUM ION, ...
Authors:Stogios, P.J., Lai, K.K., Vu, C., Xu, X., Cui, H., Molloy, S., Gonzalez, C.F., Yakunin, A., Savchenko, A.
Deposit date:2011-02-03
Release date:2011-08-31
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (1.817 Å)
Cite:An Inserted alpha/beta Subdomain Shapes the Catalytic Pocket of Lactobacillus johnsonii Cinnamoyl Esterase
Plos One, 6, 2011
3S2Z
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CRYSTAL STRUCTURE OF THE LACTOBACILLUS JOHNSONII CINNAMOYL ESTERASE LJ0536 S106A MUTANT IN COMPLEX WITH CAFFEIC ACID
Descriptor:Cinnamoyl esterase, CHLORIDE ION, CAFFEIC ACID
Authors:Stogios, P.J., Lai, K.K., Vu, C., Xu, X., Cui, H., Molloy, S., Gonzalez, C.F., Yakunin, A., Savchenko, A.
Deposit date:2011-05-17
Release date:2011-08-31
Last modified:2012-10-24
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:An inserted alpha/beta subdomain shapes the catalytic pocket of Lactobacillus johnsonii cinnamoyl esterase.
Plos One, 6, 2011
4L1J
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THREE DIMENSIONAL STRUCTURE OF MUTANT D143A OF HUMAN HD DOMAIN-CONTAINING PROTEIN 2, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET HR6723
Descriptor:HD domain-containing protein 2, HD domain-containing protein 2 (Phosphorylate), DI(HYDROXYETHYL)ETHER, ...
Authors:Kuzin, A., Su, M., Yakunin, A., Beloglazova, O., Seetharaman, J., Maglaqui, M., Xiao, R., Lee, D., Brown, G., Flick, R., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-06-03
Release date:2013-06-19
Last modified:2013-12-25
Method:X-RAY DIFFRACTION (1.824 Å)
Cite:Three dimensional structure of mutant D143A of human HD domain-containing protein 2, Northeast Structural Genomics Consortium (NESG) Target HR6723
To be Published
4L7E
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THREE DIMENSIONAL STRUCTURE OF MUTANT D78A OF HUMAN HD DOMAIN-CONTAINING PROTEIN 2, GENOMICS CONSORTIUM (NESG) TARGET HR6723
Descriptor:HD domain-containing protein 2, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Kuzin, A., Su, M., Yakunin, A., Beloglazova, N., Seetharaman, J., Maglaqui, M., Xiao, R., Lee, D., Brown, G., Flick, R., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-06-13
Release date:2013-07-24
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (2.229 Å)
Cite:Northeast Structural Genomics Consortium Target HR6723
To be Published
4L7W
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CRYSTAL STRUCTURE MUTANT H77A OF HUMAN HD DOMAIN-CONTAINING PROTEIN 2, GENOMICS CONSORTIUM (NESG) TARGET HR6723
Descriptor:HD domain-containing protein 2, MAGNESIUM ION
Authors:Kuzin, A., Su, M., Yakunin, A., Beloglazova, N., Seetharaman, J., Maglaqui, M., Xiao, R., Lee, D., Brown, G., Flick, R., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)
Deposit date:2013-06-14
Release date:2013-07-03
Method:X-RAY DIFFRACTION (2.305 Å)
Cite:Northeast Structural Genomics Consortium Target HR6723
To be Published
4MAK
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CRYSTAL STRUCTURE OF A PUTATIVE SSRNA ENDONUCLEASE CAS2, CRISPR ADAPTATION PROTEIN FROM E.COLI
Descriptor:CRISPR-associated endoribonuclease Cas2, DI(HYDROXYETHYL)ETHER
Authors:Nocek, B., Skarina, T., Brown, G., Yakunin, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-08-16
Release date:2013-09-04
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal structure of a putative ssRNA endonuclease Cas2, CRISPR adaptation protein from E.coli
TO BE PUBLISHED
4PSU
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CRYSTAL STRUCTURE OF ALPHA/BETA HYDROLASE FROM RHODOPSEUDOMONAS PALUSTRIS CGA009
Descriptor:Alpha/beta hydrolase, DODECAETHYLENE GLYCOL
Authors:Nocek, B., Hajighasemi, M., Xu, X., Cui, H., Savchenko, A., Yakunin, A.
Deposit date:2014-03-07
Release date:2015-03-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of alpha/beta hydrolase from Rhodopseudomonas palustris CGA009
TO BE PUBLISHED
4R5Q
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CRYSTAL STRUCTURE AND NUCLEASE ACTIVITY OF THE CRISPR-ASSOCIATED CAS4 PROTEIN PCAL_0546 FROM PYROBACULUM CALIDIFONTIS CONTAINING A [2FE-2S] CLUSTER
Descriptor:CRISPR-associated exonuclease, Cas4 family, MAGNESIUM ION, ...
Authors:Nocek, B., Skarina, T., Lemak, S., Brown, G., Savchenko, A., Joachimiak, A., Yakunin, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2014-08-21
Release date:2014-09-17
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure and nuclease activity of the CRISPR-associated Cas4 protein Pcal_0546 from Pyrobaculum calidifontis containing a [2Fe-2S] cluster
To be Published
5BY0
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CRYSTAL STRUCTURE OF MAGNESIUM-BOUND DUF89 PROTEIN SACCHAROMYCES CEREVISIAE
Descriptor:Protein-glutamate O-methyltransferase, MAGNESIUM ION
Authors:Nocek, B., Cuff, M., Cui, H., Xu, X., Savchenko, A., Joachimiak, A., Yakunin, A.
Deposit date:2015-06-09
Release date:2015-07-29
Last modified:2015-10-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of magnesium-bound Duf89 protein Saccharomyces cerevisiae
To Be Published
5IBZ
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CRYSTAL STRUCTURE OF A NOVEL CYCLASE (PFAM04199).
Descriptor:Uncharacterized protein, ACETYLPHOSPHATE, TRIETHYLENE GLYCOL
Authors:Nocek, B., Skarina, T., Brown, G., Joachimiak, A., Savchenko, A., Yakunin, A.
Deposit date:2016-02-22
Release date:2017-08-09
Method:X-RAY DIFFRACTION (1.611 Å)
Cite:Crystal structure of a novel cyclase (pfam04199).
To Be Published
2PAR
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CRYSTAL STRUCTURE OF THE 5'-DEOXYNUCLEOTIDASE YFBR MUTANT E72A COMPLEXED WITH CO(2+) AND TMP
Descriptor:5'-deoxynucleotidase YfbR, COBALT (II) ION, THYMIDINE-5'-PHOSPHATE, ...
Authors:Zimmerman, M.D., Proudfoot, M., Yakunin, A., Minor, W.
Deposit date:2007-03-27
Release date:2008-03-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into the mechanism of substrate specificity and catalytic activity of an HD-domain phosphohydrolase: the 5'-deoxyribonucleotidase YfbR from Escherichia coli.
J.Mol.Biol., 378, 2008
2PAU
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CRYSTAL STRUCTURE OF THE 5'-DEOXYNUCLEOTIDASE YFBR MUTANT E72A COMPLEXED WITH CO(2+) AND DAMP
Descriptor:5'-deoxynucleotidase YfbR, COBALT (II) ION, 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, ...
Authors:Zimmerman, M.D., Proudfoot, M., Yakunin, A., Minor, W.
Deposit date:2007-03-27
Release date:2008-03-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural insight into the mechanism of substrate specificity and catalytic activity of an HD-domain phosphohydrolase: the 5'-deoxyribonucleotidase YfbR from Escherichia coli.
J.Mol.Biol., 378, 2008
1M33
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CRYSTAL STRUCTURE OF BIOH AT 1.7 A
Descriptor:BioH protein, 3-HYDROXY-PROPANOIC ACID, 1,2-ETHANEDIOL
Authors:Sanishvili, R., Savchenko, A., Skarina, T., Edwards, A., Joachimiak, A., Yakunin, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2002-06-26
Release date:2003-01-21
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Integrating structure, bioinformatics, and enzymology to discover function: BioH, a new carboxylesterase from Escherichia coli.
J.Biol.Chem., 278, 2003
3NKD
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STRUCTURE OF CRISP-ASSOCIATED PROTEIN CAS1 FROM ESCHERICHIA COLI STR. K-12
Descriptor:CRISPR-associated protein Cas1
Authors:Nocek, B., Skarina, T., Beloglazova, N., Savchenko, A., Joachimiak, A., Yakunin, A.
Deposit date:2010-06-18
Release date:2010-08-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair.
Mol.Microbiol., 79, 2011
3NKE
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HIGH RESOLUTION STRUCTURE OF THE C-TERMINAL DOMAIN CRISP-ASSOCIATED PROTEIN CAS1 FROM ESCHERICHIA COLI STR. K-12
Descriptor:protein ygbT, 1,2-ETHANEDIOL, SULFITE ION, ...
Authors:Nocek, B., Skarina, T., Beloglazova, N., Savchenko, A., Joachimiak, A., Yakunin, A.
Deposit date:2010-06-18
Release date:2010-08-25
Last modified:2014-12-17
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:A dual function of the CRISPR-Cas system in bacterial antivirus immunity and DNA repair.
Mol.Microbiol., 79, 2011
3BRM
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CRYSTAL STRUCTURE OF THE COVALENT COMPLEX BETWEEN THE BACILLUS SUBTILIS GLUTAMINASE YBGJ AND 5-OXO-L-NORLEUCINE FORMED BY REACTION OF THE PROTEIN WITH 6-DIAZO-5-OXO-L-NORLEUCINE
Descriptor:Glutaminase 1, 5-OXO-L-NORLEUCINE
Authors:Singer, A.U., Kim, Y., Dementieva, I., Vinokour, E., Joachimiak, A., Savchenko, A., Yakunin, A.
Deposit date:2007-12-21
Release date:2008-05-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Functional and structural characterization of four glutaminases from Escherichia coli and Bacillus subtilis.
Biochemistry, 47, 2008
3S4L
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THE CRISPR-ASSOCIATED CAS3 HD DOMAIN PROTEIN MJ0384 FROM METHANOCALDOCOCCUS JANNASCHII
Descriptor:CAS3 Metal dependent phosphohydrolase, CALCIUM ION
Authors:Petit, P., Brown, G., Yakunin, A., Edwards, A., Joachimiak, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-05-19
Release date:2011-06-22
Last modified:2011-10-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Nuclease activity and crystal structure of the CRISPR-associated Cas3 HD domain protein MJ0384 from Methanocaldococcus jannaschii
To be Published
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