Author results

2LGJ
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SOLUTION STRUCTURE OF MSPTH
Descriptor:Peptidyl-tRNA hydrolase
Authors:Yadav, R., Pathak, P., Pulavarti, S., Jain, A., Kumar, A., Shukla, V., Arora, A.
Deposit date:2011-07-27
Release date:2012-08-01
Method:SOLUTION NMR
Cite:Solution structure and backbone dynamics of Peptidyl t-RNA hydrolase from Mycobacterium smegmatis
To be Published
2L72
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SOLUTION STRUCTURE AND DYNAMICS OF ADF FROM TOXOPLASMA GONDII (TGADF)
Descriptor:Actin depolymerizing factor, putative
Authors:Pathak, P.P., Shukla, V.K., Yadav, R., Jain, A., Srivastava, S., Tripathi, S., Pulavarti, S.V.S.R.K., Arora, A.
Deposit date:2010-12-01
Release date:2011-08-17
Last modified:2011-12-28
Method:SOLUTION NMR
Cite:Solution structure and dynamics of ADF from Toxoplasma gondii
J.Struct.Biol., 176, 2011
2NAF
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SOLUTION STRUCTURE OF PEPTIDYL-TRNA HYDROLASE FROM MYCOBACTERIUM SMEGMATIS
Descriptor:Peptidyl-tRNA hydrolase
Authors:Yadav, R., Pathak, P., Fatma, F., Kabra, A., Pulavarti, S., Jain, A., Kumar, A., Shukla, V., Arora, A.
Deposit date:2015-12-23
Release date:2017-01-11
Method:SOLUTION NMR
Cite:Structural characterization of peptidyl-tRNA hydrolase from Mycobacterium smegmatis by NMR spectroscopy.
Biochim.Biophys.Acta, 1864, 2016
3KJZ
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CRYSTAL STRUCTURE OF NATIVE PEPTIDYL-TRNA HYDROLASE FROM MYCOBACTERIUM SMEGMATIS
Descriptor:Peptidyl-tRNA hydrolase
Authors:Kumar, A., Singh, N., Yadav, R., Prem Kumar, R., Sharma, S., Arora, A., Singh, T.P.
Deposit date:2009-11-04
Release date:2010-08-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structures of Fully-Folded Native and Partially-Folded Intermediate States of Peptidyl-tRNA Hydrolase from Mycobacterium smegmatis
To be Published
5YOZ
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SOLUTION STRUCTURE OF TRUNCATED RAB5A FROM LEISHMANIA DONOVANI
Descriptor:Rab5a
Authors:Maheshwari, D., Yadav, R., Mukhopadhyay, A., Arora, A.
Deposit date:2017-10-31
Release date:2018-10-24
Method:SOLUTION NMR
Cite:Structural and Biophysical Characterization of Rab5a from Leishmania Donovani
Biophys. J., 115, 2018
2LRA
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NMR STRUCTURE OF SIGNAL SEQUENCE DELETED (SSD) RV0603 PROTEIN FROM MYCOBACTERIUM TUBERCULOSIS WITHOUT N-TERMINAL HIS-TAG
Descriptor:POSSIBLE EXPORTED PROTEIN
Authors:Tripathi, S., Pulavarti, S., Yadav, R., Jain, A., Pathak, P., Meher, A., Arora, A.
Deposit date:2012-03-28
Release date:2013-05-22
Method:SOLUTION NMR
Cite:NMR Structure of Signal Sequence Deleted (SSD) Rv0603 Protein from Mycobacterium tuberculosis without N-terminal His-tag
To be Published
2LXX
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SOLUTION STRUCTURE OF COFILIN LIKE UNC-60B PROTEIN FROM CAENORHABDITIS ELEGANS
Descriptor:Actin-depolymerizing factor 2, isoform c
Authors:Shukla, V., Yadav, R., Kabra, A., Jain, A., Kumar, D., Ono, S., Arora, A.
Deposit date:2012-09-04
Release date:2013-10-09
Last modified:2016-12-21
Method:SOLUTION NMR
Cite:Solution structure and dynamics of UNC-60B from Caenorhabditis elegans
To be Published
2MJL
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SOLUTION STRUCTURE OF PEPTIDYL-TRNA HYROLASE FROM VIBRIO CHOLERAE
Descriptor:Peptidyl-tRNA hydrolase
Authors:Kabra, A., Shahid, S., Yadav, R., Pulavarti, S., Shukla, V.K., Arora, A.
Deposit date:2014-01-11
Release date:2015-01-21
Method:SOLUTION NMR
Cite:Solution structure of peptidyl-tRNA hydrolase from Vibrio cholerae
To be Published
2MP4
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SOLUTION STRUCTURE OF ADF LIKE UNC-60A PROTEIN OF CAENORHABDITIS ELEGANS
Descriptor:Actin-depolymerizing factor 1, isoforms a/b
Authors:Shukla, V., Yadav, R., Kabra, A., Kumar, D., Ono, S., Arora, A.
Deposit date:2014-05-11
Release date:2014-06-11
Method:SOLUTION NMR
Cite:NMR Structure and Backbone dynamics of ADF like UNC-60A protein from Caenorhabditis elegans: its divergence from conventional ADF/cofilin
To be Published
3KK0
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CRYSTAL STRUCTURE OF PARTIALLY FOLDED INTERMEDIATE STATE OF PEPTIDYL-TRNA HYDROLASE FROM MYCOBACTERIUM SMEGMATIS
Descriptor:Peptidyl-tRNA hydrolase, ISOPROPYL ALCOHOL, 1,2-ETHANEDIOL, ...
Authors:Kumar, A., Singh, N., Yadav, R., Sharma, S., Arora, A., Singh, T.P.
Deposit date:2009-11-04
Release date:2010-11-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structures of Fully-Folded Native and Partially-Folded Intermediate States of Peptidyl-tRNA Hydrolase from Mycobacterium smegmatis
To be Published
3P2J
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CRYSTAL STRUCTURE OF PEPTIDYL-TRNA HYDROLASE FROM MYCOBACTERIUM SMEGMATIS AT 2.2 A RESOLUTION
Descriptor:Peptidyl-tRNA hydrolase
Authors:Kumar, A., Singh, A., Yadav, R., Sinha, M., Arora, A., Sharma, S., Singh, T.P.
Deposit date:2010-10-02
Release date:2010-11-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal Structure of peptidyl-tRNA hydrolase from Mycobacterium smegmatis at 2.2 A resolution
To be Published
4ZXP
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CRYSTAL STRUCTURE OF PEPTIDYL- TRNA HYDROLASE FROM VIBRIO CHOLERAE
Descriptor:Peptidyl-tRNA hydrolase, CITRATE ANION
Authors:Shahid, S., Pal, R.K., Kabra, A., Yadav, R., Kumar, A., Arora, A.
Deposit date:2015-05-20
Release date:2016-06-22
Last modified:2017-04-05
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase.
RNA, 23, 2017
5GMU
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CRYSTAL STRUCTURE OF CHORISMATE MUTASE LIKE DOMAIN OF BIFUNCTIONAL DAHP SYNTHASE OF BACILLUS SUBTILIS IN COMPLEX WITH CHLOROGENIC ACID
Descriptor:Protein AroA(G), (1R,3R,4S,5R)-3-[3-[3,4-bis(oxidanyl)phenyl]propanoyloxy]-1,4,5-tris(oxidanyl)cyclohexane-1-carboxylic acid, SULFATE ION
Authors:Pratap, S., Dev, A., Sharma, V., Yadav, R., Narwal, M., Tomar, S., Kumar, P.
Deposit date:2016-07-16
Release date:2017-07-26
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Chorismate Mutase-like Domain of DAHPS from Bacillus subtilis Complexed with Novel Inhibitor Reveals Conformational Plasticity of Active Site.
Sci Rep, 7, 2017
5GO2
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CRYSTAL STRUCTURE OF CHORISMATE MUTASE LIKE DOMAIN OF BIFUNCTIONAL DAHP SYNTHASE OF BACILLUS SUBTILIS IN COMPLEX WITH CITRATE
Descriptor:Protein AroA(G), SULFATE ION, CITRIC ACID
Authors:Pratap, S., Dev, A., Sharma, V., Yadav, R., Narwal, M., Tomar, S., Kumar, P.
Deposit date:2016-07-26
Release date:2017-07-26
Last modified:2019-02-06
Method:X-RAY DIFFRACTION (1.907 Å)
Cite:Structure of Chorismate Mutase-like Domain of DAHPS from Bacillus subtilis Complexed with Novel Inhibitor Reveals Conformational Plasticity of Active Site.
Sci Rep, 7, 2017
5JXX
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CRYSTAL STRUCTURE OF UDP-N-ACETYLGLUCOSAMINE O-ACYLTRANSFERASE (LPXA) FROM MORAXELLA CATARRHALIS RH4.
Descriptor:Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, GLYCEROL, CITRATE ANION
Authors:Pratap, S., Kesari, P., Yadav, R., Narwal, M., Dev, A., Kumar, P.
Deposit date:2016-05-13
Release date:2017-06-14
Method:X-RAY DIFFRACTION (3.001 Å)
Cite:Acyl chain preference and inhibitor identification of Moraxella catarrhalis LpxA: Insight through crystal structure and computational studies.
Int. J. Biol. Macromol., 96, 2017
5XCE
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CRYSTAL STRUCTURE OF WILD TYPE VPS29 FROM ENTAMOEBA HISTOLYTICA
Descriptor:Vacuolar protein sorting-associated protein 29
Authors:Srivastava, V.K., Yadav, R., Tomar, P., Gourinath, S., Datta, S.
Deposit date:2017-03-22
Release date:2017-10-04
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Structural and thermodynamic characterization of metal binding in Vps29 from Entamoeba histolytica: implication in retromer function.
Mol. Microbiol., 106, 2017
5XCH
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CRYSTAL STRUCTURE OF WILD TYPE VPS29 COMPLEXED WITH ZN+2 FROM ENTAMOEBA HISTOLYTICA
Descriptor:Vacuolar protein sorting-associated protein 29, ZINC ION
Authors:Srivastava, V.K., Yadav, R., Tomar, P., Gourinath, S., Datta, S.
Deposit date:2017-03-22
Release date:2017-10-18
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural and thermodynamic characterization of metal binding in Vps29 from Entamoeba histolytica: implication in retromer function.
Mol. Microbiol., 106, 2017
5XCJ
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CRYSTAL STRUCTURE OF VPS29 SINGLE MUTANT (D62A) FROM ENTAMOEBA HISTOLYTICA
Descriptor:Vacuolar protein sorting-associated protein 29
Authors:Srivastava, V.K., Yadav, R., Tomar, P., Gourinath, S., Datta, S.
Deposit date:2017-03-22
Release date:2017-10-18
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (1.859 Å)
Cite:Structural and thermodynamic characterization of metal binding in Vps29 from Entamoeba histolytica: implication in retromer function.
Mol. Microbiol., 106, 2017
5XCK
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CRYSTAL STRUCTURE OF VPS29 DOUBLE MUTANT (D62A/H86A) FROM ENTAMOEBA HISTOLYTICA
Descriptor:Vacuolar protein sorting-associated protein 29
Authors:Srivastava, V.K., Yadav, R., Tomar, P., Gourinath, S., Datta, S.
Deposit date:2017-03-22
Release date:2017-10-18
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and thermodynamic characterization of metal binding in Vps29 from Entamoeba histolytica: implication in retromer function.
Mol. Microbiol., 106, 2017
4Z86
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CRYSTAL STRUCTURE OF PEPTIDYL-TRNA HYDROLASE MUTANT -N118D FROM VIBRIO CHOLERAE AT 1.63A RESOLUTION.
Descriptor:Peptidyl-tRNA hydrolase
Authors:Shahid, S., Kabra, A., Pal, R.K., Arora, A.
Deposit date:2015-04-08
Release date:2016-06-08
Last modified:2017-04-05
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase.
RNA, 23, 2017
5B6J
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CRYSTAL STRUCTURE OF PEPTIDYL-TRNA HYDROLASE MUTANT -H24N FROM VIBRIO CHOLERAE
Descriptor:Peptidyl-tRNA hydrolase
Authors:Shahid, S., Kabra, A., Pal, R.K., Arora, A.
Deposit date:2016-05-30
Release date:2017-04-12
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase.
RNA, 23, 2017
5IKE
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CRYSTAL STRUCTURE OF MUTANT-D97N OF PEPTIDYL-TRNA HYDROLASE FROM VIBRIO CHOLERAE
Descriptor:Peptidyl-tRNA hydrolase
Authors:Shahid, S., Kabra, A., Pal, R.K., Arora, A.
Deposit date:2016-03-03
Release date:2017-03-08
Last modified:2017-04-05
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase.
RNA, 23, 2017
5IMB
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CRYSTAL STRUCTURE OF PEPTIDYL-TRNA HYDROLASE MUTANT-N14D FROM VIBRIO CHOLERAE
Descriptor:Peptidyl-tRNA hydrolase
Authors:Shahid, S., Kabra, A., Pal, R.K., Arora, A.
Deposit date:2016-03-06
Release date:2017-03-08
Last modified:2017-04-12
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Unraveling the stereochemical and dynamic aspects of the catalytic site of bacterial peptidyl-tRNA hydrolase.
RNA, 23, 2017
6CHI
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HUMAN CYTOCHROME P450 17A1 IN COMPLEX WITH INHIBITOR: ABIRATERONE C6 AMIDE
Descriptor:Steroid 17-alpha-hydroxylase/17,20 lyase, PROTOPORPHYRIN IX CONTAINING FE, 3-hydroxy-17-(3-pyridyl)-androst-5,16-dien-6-amide
Authors:Scott, E.E.
Deposit date:2018-02-22
Release date:2018-06-06
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (2.698 Å)
Cite:Structure-Based Design of Inhibitors with Improved Selectivity for Steroidogenic Cytochrome P450 17A1 over Cytochrome P450 21A2.
J. Med. Chem., 61, 2018
6CIR
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HUMAN CYTOCHROME P450 17A1 IN COMPLEX WITH INHIBITOR: ABIRATERONE C6 OXIME
Descriptor:Steroid 17-alpha-hydroxylase/17,20 lyase, PROTOPORPHYRIN IX CONTAINING FE, 6-oxime-17-(3-pyridyl)-androst-16-en-3-ol
Authors:Scott, E.E., Fehl, C.
Deposit date:2018-02-25
Release date:2018-06-06
Last modified:2018-06-27
Method:X-RAY DIFFRACTION (2.648 Å)
Cite:Structure-Based Design of Inhibitors with Improved Selectivity for Steroidogenic Cytochrome P450 17A1 over Cytochrome P450 21A2.
J. Med. Chem., 61, 2018
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