Author results

2GJW
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RNA RECOGNITION AND CLEAVAGE BY AN SPLICING ENDONUCLEASE
Descriptor:5'-R(*GP*CP*GP*AP*CP*CP*GP*AP*CP*CP*AP*(DU)P*AP*GP*CP*UP*GP*CP*A)-3', 5'-R(*UP*GP*CP*AP*GP*CP*GP*GP*UP*CP*AP*(A23))-3', 5'-R(*AP*GP*GP*UP*CP*GP*C)-3', ...
Authors:Xue, S., Calvin, K., Li, H.
Deposit date:2006-03-31
Release date:2006-09-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:RNA Recognition and Cleavage by an Splicing Endonuclease
Science, 312, 2006
3NVK
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STRUCTURAL BASIS FOR SUBSTRATE PLACEMENT BY AN ARCHAEAL BOX C/D RIBONUCLEOPROTEIN PARTICLE
Descriptor:NOP5/NOP56 related protein, 50S ribosomal protein L7Ae, Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase, ...
Authors:Xue, S., Wang, R., Li, H.
Deposit date:2010-07-08
Release date:2011-07-20
Method:X-RAY DIFFRACTION (3.209 Å)
Cite:Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle.
Mol.Cell, 39, 2010
3NVM
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STRUCTURAL BASIS FOR SUBSTRATE PLACEMENT BY AN ARCHAEAL BOX C/D RIBONUCLEOPROTEIN PARTICLE
Descriptor:NOP5/NOP56 related protein, Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase
Authors:Xue, S., Wang, R., Li, H.
Deposit date:2010-07-08
Release date:2011-07-20
Method:X-RAY DIFFRACTION (3.408 Å)
Cite:Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle.
Mol.Cell, 39, 2010
5H01
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THE CRYSTAL STRUCTURE OF D-2-HALACID DEHALOGENASE MUTANT
Descriptor:(R)-2-haloacid dehalogenase
Authors:Xue, S., Wang, Y.
Deposit date:2016-10-02
Release date:2017-10-04
Method:X-RAY DIFFRACTION (2.194 Å)
Cite:The crystal structure of D-2-halacid dehalogenase mutant
To Be Published
3NMU
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CRYSTAL STRUCTURE OF SUBSTRATE-BOUND HALFMER BOX C/D RNP
Descriptor:NOP5/NOP56 related protein, 50S ribosomal protein L7Ae, RNA (34-MER), ...
Authors:Li, H., Xue, S., Wang, R.
Deposit date:2010-06-22
Release date:2011-05-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.729 Å)
Cite:Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle.
Mol.Cell, 39, 2010
3NVI
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STRUCTURE OF N-TERMINAL TRUNCATED NOP56/58 BOUND WITH L7AE AND BOX C/D RNA
Descriptor:NOP5/NOP56 related protein, 50S ribosomal protein L7Ae, RNA (5'-R(*CP*UP*CP*UP*GP*AP*CP*CP*GP*AP*AP*AP*GP*GP*CP*GP*UP*GP*AP*UP*GP*AP*GP*C)-3')
Authors:Li, H., Xue, S., Wang, R.
Deposit date:2010-07-08
Release date:2011-07-20
Last modified:2013-09-25
Method:X-RAY DIFFRACTION (2.709 Å)
Cite:Structural basis for substrate placement by an archaeal box C/D ribonucleoprotein particle.
Mol.Cell, 39, 2010
4RZI
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CRYSTAL STRUCTURE OF PHAB FROM SYNECHOCYSTIS SP. PCC 6803
Descriptor:3-ketoacyl-acyl carrier protein reductase
Authors:Xue, S., Liu, Y.
Deposit date:2014-12-22
Release date:2015-09-30
Last modified:2015-10-21
Method:X-RAY DIFFRACTION (2.891 Å)
Cite:Structure-directed construction of a high-performance version of the enzyme FabG from the photosynthetic microorganism Synechocystis sp. PCC 6803.
Febs Lett., 589, 2015
5X04
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12:0-ACP THIOESTERASE FROM UMBELLULARIA CALIFORNICA
Descriptor:Dodecanoyl-[acyl-carrier-protein] hydrolase, chloroplastic
Authors:Xue, S., Feng, Y.
Deposit date:2017-01-19
Release date:2017-10-25
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural Insight into Acyl-ACP Thioesterase toward Substrate Specificity Design.
ACS Chem. Biol., 12, 2017
6IQD
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CRYSTAL STRUCTURE OF ALCOHOL DEHYDROGENASE FROM GEOBACILLUS STEAROTHERMOPHILUS
Descriptor:Alcohol dehydrogenase, ZINC ION
Authors:Xue, S., Feng, Y., Guo, X., Zhao, Z.
Deposit date:2018-11-07
Release date:2019-06-05
Method:X-RAY DIFFRACTION (2.84 Å)
Cite:Characterization of the substrate scope of an alcohol dehydrogenase commonly used as methanol dehydrogenase.
Bioorg.Med.Chem.Lett., 29, 2019
2F4W
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HUMAN UBIQUITIN-CONJUGATING ENZYME E2 J2
Descriptor:ubiquitin-conjugating enzyme E2, J2
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Finerty Jr., P.J., Newman, E.M., Mackenzie, F., Weigelt, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2005-11-24
Release date:2005-12-27
Last modified:2012-11-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:A human ubiquitin conjugating enzyme (E2)-HECT E3 ligase structure-function screen.
Mol Cell Proteomics, 11, 2012
2KVR
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SOLUTION NMR STRUCTURE OF HUMAN UBIQUITIN SPECIFIC PROTEASE USP7 UBL DOMAIN (RESIDUES 537-664). NESG TARGET HR4395C/ SGC-TORONTO
Descriptor:Ubiquitin carboxyl-terminal hydrolase 7
Authors:Bezsonova, I., Lemak, A., Avvakumov, G., Xue, S., Dhe-Paganon, S., Montelione, G.T., Arrowsmith, C., Northeast Structural Genomics Consortium (NESG), Structural Genomics Consortium (SGC)
Deposit date:2010-03-25
Release date:2010-04-21
Last modified:2012-05-23
Method:SOLUTION NMR
Cite:solution structure of the ubiquitin specific protease Usp7 ubiquitin-like domain
To be Published
2NQ3
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CRYSTAL STRUCTURE OF THE C2 DOMAIN OF HUMAN ITCHY HOMOLOG E3 UBIQUITIN PROTEIN LIGASE
Descriptor:Itchy homolog E3 ubiquitin protein ligase, CHLORIDE ION
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Butler-Cole, C., Finerty Jr., P.J., Weigelt, J., Sundstrom, M., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2006-10-30
Release date:2006-11-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The C2 Domain of Human Itchy Homolog E3 Ubiquitin Protein Ligase
To be Published
2NSQ
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CRYSTAL STRUCTURE OF THE C2 DOMAIN OF THE HUMAN E3 UBIQUITIN-PROTEIN LIGASE NEDD4-LIKE PROTEIN
Descriptor:E3 ubiquitin-protein ligase NEDD4-like protein, 1,2-ETHANEDIOL, GLYCEROL
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Butler-Cole, C., Finerty Jr., P.J., Weigelt, J., Sundstrom, M., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2006-11-06
Release date:2006-12-19
Last modified:2013-08-28
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The C2 domain of the human E3 ubiquitin-protein ligase NEDD4-like protein
To be Published
3BI7
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CRYSTAL STRUCTURE OF THE SRA DOMAIN OF E3 UBIQUITIN-PROTEIN LIGASE UHRF1
Descriptor:E3 ubiquitin-protein ligase UHRF1, SULFATE ION, 1,2-ETHANEDIOL, ...
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Li, Y., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2007-11-30
Release date:2007-12-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for recognition of hemi-methylated DNA by the SRA domain of human UHRF1.
Nature, 455, 2008
3CLZ
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THE SET AND RING ASSOCIATED (SRA) DOMAIN OF UHRF1 BOUND TO METHYLATED DNA
Descriptor:E3 ubiquitin-protein ligase UHRF1, 5'-D(*DGP*DGP*DGP*DCP*DCP*(5CM)P*DGP*DCP*DAP*DGP*DGP*DG)-3', 5'-D(*DCP*DCP*DCP*DTP*DGP*DCP*DGP*DGP*DGP*DCP*DCP*DC)-3'
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Dong, A., Li, Y., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2008-03-20
Release date:2008-04-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for recognition of hemi-methylated DNA by the SRA domain of human UHRF1.
Nature, 455, 2008
3DB3
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CRYSTAL STRUCTURE OF THE TANDEM TUDOR DOMAINS OF THE E3 UBIQUITIN-PROTEIN LIGASE UHRF1 IN COMPLEX WITH TRIMETHYLATED HISTONE H3-K9 PEPTIDE
Descriptor:E3 ubiquitin-protein ligase UHRF1, Trimethylated histone H3-K9 peptide
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Dong, A., Li, Y., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2008-05-30
Release date:2008-09-16
Last modified:2012-04-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Recognition of multivalent histone states associated with heterochromatin by UHRF1 protein.
J.Biol.Chem., 286, 2011
3DB4
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CRYSTAL STRUCTURE OF THE TANDEM TUDOR DOMAINS OF THE E3 UBIQUITIN-PROTEIN LIGASE UHRF1
Descriptor:E3 ubiquitin-protein ligase UHRF1, SULFATE ION
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Dong, A., Li, Y., Bountra, C., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2008-05-30
Release date:2008-09-16
Last modified:2012-04-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Recognition of multivalent histone states associated with heterochromatin by UHRF1 protein.
J.Biol.Chem., 286, 2011
1YQB
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HUMAN UBIQUILIN 3
Descriptor:Ubiquilin 3
Authors:Walker, J.R., Xue, S., Avvakumov, G.V., Newman, E.M., Mackenzie, F., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2005-02-01
Release date:2005-02-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Ubiquitin-like domain of Human Ubiquilin 3
To be Published
1Z6U
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NP95-LIKE RING FINGER PROTEIN ISOFORM B [HOMO SAPIENS]
Descriptor:Np95-like ring finger protein isoform b, ZINC ION
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Newman, E.M., Mackenzie, F., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2005-03-23
Release date:2005-05-03
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:2.1 Angstrom Crystal Structure of the Human Ubiquitin Liagse NIRF
To be Published
1ZDN
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UBIQUITIN-CONJUGATING ENZYME E2S
Descriptor:Ubiquitin-conjugating enzyme E2S, SODIUM ION
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Newman, E.M., Mackenzie, F., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2005-04-14
Release date:2005-05-03
Last modified:2012-11-28
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:A human ubiquitin conjugating enzyme (E2)-HECT E3 ligase structure-function screen.
Mol Cell Proteomics, 11, 2012
1ZKH
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SOLUTION STRUCTURE OF A HUMAN UBIQUITIN-LIKE DOMAIN IN SF3A1
Descriptor:Splicing factor 3 subunit 1
Authors:Lukin, J.A., Dhe-Paganon, S., Guido, V., Lemak, A., Avvakumov, G.V., Xue, S., Newman, E.M., Mackenzie, F., Sundstrom, M., Edwards, A., Arrowsmith, C.H., Structural Genomics Consortium (SGC)
Deposit date:2005-05-02
Release date:2005-05-10
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of a human ubiquitin-like domain in SF3A1
To be Published
2A4D
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STRUCTURE OF THE HUMAN UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1 (UEV-1)
Descriptor:Ubiquitin-conjugating enzyme E2 variant 1
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Newman, E.M., Mackenzie, F., Weigelt, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2005-06-28
Release date:2005-07-12
Last modified:2012-11-28
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:A human ubiquitin conjugating enzyme (E2)-HECT E3 ligase structure-function screen.
Mol Cell Proteomics, 11, 2012
2A7L
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STRUCTURE OF THE HUMAN HYPOTHETICAL UBIQUITIN-CONJUGATING ENZYME, LOC55284
Descriptor:Hypothetical ubiquitin-conjugating enzyme LOC55284, SODIUM ION
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Newman, E.M., Mackenzie, F., Weigelt, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2005-07-05
Release date:2005-09-06
Last modified:2012-11-28
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:A human ubiquitin conjugating enzyme (E2)-HECT E3 ligase structure-function screen.
Mol Cell Proteomics, 11, 2012
2A9U
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STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 8 (USP8)
Descriptor:Ubiquitin carboxyl-terminal hydrolase 8
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Newman, E.M., Mackenzie, F., Weigelt, J., Sundstrom, M., Arrowsmith, C., Edwards, E., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2005-07-12
Release date:2005-08-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Amino-terminal Dimerization, NRDP1-Rhodanese Interaction, and Inhibited Catalytic Domain Conformation of the Ubiquitin-specific Protease 8 (USP8).
J.Biol.Chem., 281, 2006
2AWF
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STRUCTURE OF HUMAN UBIQUITIN-CONJUGATING ENZYME E2 G1
Descriptor:Ubiquitin-conjugating enzyme E2 G1
Authors:Walker, J.R., Avvakumov, G.V., Xue, S., Newman, E.M., Finerty, P., Mackenzie, F., Weigelt, J., Sundstrom, M., Arrowsmith, C., Edwards, A., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)
Deposit date:2005-09-01
Release date:2005-09-20
Last modified:2012-11-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A human ubiquitin conjugating enzyme (E2)-HECT E3 ligase structure-function screen.
Mol Cell Proteomics, 11, 2012
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