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1AY9
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BU of 1ay9 by Molmil
WILD-TYPE UMUD' FROM E. COLI
Descriptor: UMUD PROTEIN
Authors:Peat, T.S, Frank, E.G, Mcdonald, J.P, Levine, A.S, Woodgate, R, Hendrickson, W.A.
Deposit date:1997-11-15
Release date:1998-01-28
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (3 Å)
Cite:The UmuD' protein filament and its potential role in damage induced mutagenesis.
Structure, 4, 1996
1JXL
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BU of 1jxl by Molmil
Crystal Structure of a Y-Family DNA Polymerase in a Ternary Complex with DNA Substrates and an Incoming Nucleotide
Descriptor: 1,2-ETHANEDIOL, 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3', ...
Authors:Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
Deposit date:2001-09-07
Release date:2001-10-05
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication.
Cell(Cambridge,Mass.), 107, 2001
1JX4
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BU of 1jx4 by Molmil
Crystal Structure of a Y-family DNA Polymerase in a Ternary Complex with DNA Substrates and an Incoming Nucleotide
Descriptor: 2',3'-DIDEOXYADENOSINE-5'-DIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*T*TP*CP*AP*TP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
Authors:Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
Deposit date:2001-09-05
Release date:2001-10-05
Last modified:2011-11-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication.
Cell(Cambridge,Mass.), 107, 2001
1N48
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BU of 1n48 by Molmil
Y-family DNA polymerase Dpo4 in complex with DNA containing abasic lesion
Descriptor: 5'-D(*CP*AP*(3DR)P*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
Deposit date:2002-10-30
Release date:2004-02-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A Y-family polymerase complexed with abasic lesions: catching DNA with a loaded nucleoside triphosphate
To be Published
1N56
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BU of 1n56 by Molmil
Y-family DNA polymerase Dpo4 in complex with DNA containing abasic lesion
Descriptor: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*AP*A)-3', 5'-D(*TP*CP*AP*TP*(3DR)P*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
Deposit date:2002-11-04
Release date:2004-02-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Snapshots of replication through an abasic lesion; structural basis for base substitutions and frameshifts.
Mol.Cell, 13, 2004
1RYS
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BU of 1rys by Molmil
REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION
Descriptor: 1,2-ETHANEDIOL, 5'-D(*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*A)-3', 5'-D(*TP*CP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
Authors:Ling, H, Boudsocq, F, Plosky, B, Woodgate, R, Yang, W.
Deposit date:2003-12-22
Release date:2004-02-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Replication of a Cis-Syn Thymine Dimer at Atomic Resolution
Nature, 424, 2003
1S0M
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BU of 1s0m by Molmil
Crystal structure of a Benzo[a]pyrene Diol Epoxide adduct in a ternary complex with a DNA polymerase
Descriptor: 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE, 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*T)-3', ...
Authors:Ling, H, Sayer, J.M, Boudsocq, F, Plosky, B.S, Woodgate, R, Yang, W.
Deposit date:2003-12-31
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a benzo[a]pyrene diol epoxide adduct in a ternary complex with a DNA polymerase.
Proc.Natl.Acad.Sci.USA, 101, 2004
1RYR
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BU of 1ryr by Molmil
REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION
Descriptor: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*C)-3', 5'-D(*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Ling, H, Boudsocq, F, Plosky, B, Woodgate, R, Yang, W.
Deposit date:2003-12-22
Release date:2004-02-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Replication of a Cis-Syn Thymine Dimer at Atomic Resolution
Nature, 424, 2003
1S10
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BU of 1s10 by Molmil
Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*A)-3', 5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', ...
Authors:Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
Deposit date:2004-01-05
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
1S0N
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BU of 1s0n by Molmil
Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
Descriptor: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*AP*CP*TP*GP*AP*TP*CP*AP*CP*G)-3', 5'-D(*TP*AP*CP*GP*AP*CP*GP*TP*GP*AP*TP*CP*AP*GP*TP*GP*CP*C)-3', ...
Authors:Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
Deposit date:2003-12-31
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
1S0O
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BU of 1s0o by Molmil
Snapshots of replication through an abasic lesion: structural basis for base substitution and frameshift
Descriptor: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*CP*TP*C)-3', 5'-D(*TP*CP*AP*GP*TP*AP*GP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3', CALCIUM ION, ...
Authors:Ling, H, Boudsocq, F, Woodgate, R, Yang, W.
Deposit date:2003-12-31
Release date:2004-03-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Snapshots of Replication through an Abasic Lesion; Structural Basis for Base Substitutions and Frameshifts.
Mol.Cell, 13, 2004
1UMU
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BU of 1umu by Molmil
STRUCTURE DETERMINATION OF UMUD' BY MAD PHASING OF THE SELENOMETHIONYL PROTEIN
Descriptor: UMUD'
Authors:Peat, T.S, Hendrickson, W.A.
Deposit date:1996-03-07
Release date:1996-08-01
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of the UmuD' protein and its regulation in response to DNA damage.
Nature, 380, 1996
2AGQ
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BU of 2agq by Molmil
Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 5'-D(*GP*GP*CP*TP*AP*CP*AP*GP*GP*AP*CP*TP*(DOC))-3', 5'-D(*TP*CP*AP*TP*GP*AP*GP*TP*CP*CP*TP*GP*TP*AP*GP*CP*C)-3', ...
Authors:Ling, H, Yang, W.
Deposit date:2005-07-27
Release date:2005-09-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2AGO
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BU of 2ago by Molmil
Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
Descriptor: CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*CP*G)-3'), DNA (5'-D(*TP*TP*TP*TP*GP*AP*AP*TP*CP*CP*TP*TP*CP*CP*CP*CP*C)-3'), ...
Authors:Ling, H, Yang, W.
Deposit date:2005-07-27
Release date:2005-09-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
2AGP
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BU of 2agp by Molmil
Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*TP*(DOC)-3'), ...
Authors:Ling, H, Yang, W.
Deposit date:2005-07-27
Release date:2005-09-06
Last modified:2023-02-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Fidelity of Dpo4: effect of metal ions, nucleotide selection and pyrophosphorolysis.
Embo J., 24, 2005
1IM4
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BU of 1im4 by Molmil
Crystal Structure of a DinB Homolog (DBH) Lesion Bypass DNA Polymerase Catalytic Fragment from Sulfolobus solfataricus
Descriptor: DBH, SULFATE ION
Authors:Pata, J.D, Zhou, B.L, Steitz, T.A.
Deposit date:2001-05-09
Release date:2001-09-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of a DinB lesion bypass DNA polymerase catalytic fragment reveals a classic polymerase catalytic domain.
Mol.Cell, 8, 2001

217705

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