Author results

6I5C
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LONG WAVELENGTH NATIVE-SAD PHASING OF TUBULIN-STATHMIN-TTL COMPLEX
Descriptor:Tubulin alpha-1B chain, Tubulin beta-2B chain, Stathmin-4, ...
Authors:Basu, S., Olieric, V., Matsugaki, N., Kawano, Y., Takashi, T., Huang, C.Y., Leonarski, F., Yamada, Y., Vera, L., Olieric, N., Basquin, J., Wojdyla, J.A., Diederichs, K., Yamamoto, M., Bunk, O., Wang, M.
Deposit date:2018-11-13
Release date:2019-03-13
Last modified:2019-05-29
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Long-wavelength native-SAD phasing: opportunities and challenges.
Iucrj, 6, 2019
6I59
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LONG WAVELENGTH NATIVE-SAD PHASING OF SEN1 HELICASE
Descriptor:Helicase SEN1, ADENOSINE-5'-DIPHOSPHATE, 1,2-ETHANEDIOL, ...
Authors:Basu, S., Olieric, V., Matsugaki, N., Kawano, Y., Takashi, T., Huang, C.Y., Leonarski, F., Yamada, Y., Vera, L., Olieric, N., Basquin, J., Wojdyla, J.A., Diederichs, K., Yamamoto, M., Bunk, O., Wang, M.
Deposit date:2018-11-13
Release date:2019-03-13
Last modified:2019-06-12
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Long-wavelength native-SAD phasing: opportunities and challenges.
Iucrj, 6, 2019
5ZO2
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CRYSTAL STRUCTURE OF MOUSE NECTIN-LIKE MOLECULE 4 (MNECL-4) FULL ECTODOMAIN IN COMPLEX WITH MOUSE NECTIN-LIKE MOLECULE 1 (MNECL-1) IG1 DOMAIN, 3.3A
Descriptor:Cell adhesion molecule 4, Cell adhesion molecule 3, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Liu, X., An, T., Li, D., Fan, Z., Xiang, P., Li, C., Ju, W., Li, J., Hu, G., Qin, B., Yin, B., Wojdyla, J.A., Wang, M., Yuan, J., Qiang, B., Shu, P., Cui, S., Peng, X.
Deposit date:2018-04-12
Release date:2019-01-30
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Structure of the heterophilic interaction between the nectin-like 4 and nectin-like 1 molecules.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5ZO1
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CRYSTAL STRUCTURE OF MOUSE NECTIN-LIKE MOLECULE 4 (MNECL-4) FULL ECTODOMAIN (IG1-IG3), 2.2A
Descriptor:Cell adhesion molecule 4, ALPHA-L-FUCOSE, N-ACETYL-D-GLUCOSAMINE, ...
Authors:Liu, X., An, T., Li, D., Fan, Z., Xiang, P., Li, C., Ju, W., Li, J., Hu, G., Qin, B., Yin, B., Wojdyla, J.A., Wang, M., Yuan, J., Qiang, B., Shu, P., Cui, S., Peng, X.
Deposit date:2018-04-12
Release date:2019-01-30
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structure of the heterophilic interaction between the nectin-like 4 and nectin-like 1 molecules.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
5XGQ
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CRYSTAL STRUCTURE OF APO FORM (FREE-STATE) MYCOBACTERIUM TUBERCULOSIS METHIONYL-TRNA SYNTHETASE
Descriptor:Methionine-tRNA ligase
Authors:Wang, W., Wang, M., Wojdyla, J.A., Cui, S.
Deposit date:2017-04-15
Release date:2018-07-11
Last modified:2018-08-01
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Structural characterization of free-state and product-stateMycobacterium tuberculosismethionyl-tRNA synthetase reveals an induced-fit ligand-recognition mechanism
IUCrJ, 5, 2018
5XET
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CRYSTAL STRUCTURE OF MYCOBACTERIUM TUBERCULOSIS METHIONYL-TRNA SYNTHETASE BOUND BY METHIONYL-ADENYLATE (MET-AMP)
Descriptor:Methionine--tRNA ligase, [[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] (2S)-2-azanyl-4-methylsulfanyl-butanoate, 1,2-ETHANEDIOL, ...
Authors:Wang, W., Qin, B., Wojdyla, J.A., Wang, M., Gao, X., Cui, S.
Deposit date:2017-04-06
Release date:2018-07-11
Last modified:2018-08-01
Method:X-RAY DIFFRACTION (2.38 Å)
Cite:Structural characterization of free-state and product-stateMycobacterium tuberculosismethionyl-tRNA synthetase reveals an induced-fit ligand-recognition mechanism.
IUCrJ, 5, 2018
5WWP
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CRYSTAL STRUCTURE OF MIDDLE EAST RESPIRATORY SYNDROME CORONAVIRUS HELICASE (MERS-COV NSP13)
Descriptor:ORF1ab, ZINC ION, SULFATE ION
Authors:Hao, W., Wojdyla, J.A., Zhao, R., Han, R., Das, R., Zlatev, I., Manoharan, M., Wang, M., Cui, S.
Deposit date:2017-01-03
Release date:2017-07-05
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of Middle East respiratory syndrome coronavirus helicase
PLoS Pathog., 13, 2017
5KWB
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CRYSTAL STRUCTURE OF THE RECEPTOR BINDING DOMAIN OF THE SPIKE GLYCOPROTEIN OF HUMAN BETACORONAVIRUS HKU1 (HKU1 1A-CTD, 1.9 ANGSTROM, MOLECULAR REPLACEMENT)
Descriptor:Spike glycoprotein, N-ACETYL-D-GLUCOSAMINE, SUCROSE, ...
Authors:Guan, H., Wojdyla, J.A., Wang, M., Cui, S.
Deposit date:2016-07-17
Release date:2017-06-07
Last modified:2017-06-14
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Crystal structure of the receptor binding domain of the spike glycoprotein of human betacoronavirus HKU1
Nat Commun, 8, 2017
5GNB
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CRYSTAL STRUCTURE OF THE RECEPTOR BINDING DOMAIN OF THE SPIKE GLYCOPROTEIN OF HUMAN BETACORONAVIRUS HKU1 (HKU1 1A-CTD, 2.3 ANGSTROM, NATIVE-SAD PHASING)
Descriptor:Spike glycoprotein, N-ACETYL-D-GLUCOSAMINE
Authors:Guan, H., Wojdyla, J.A., Wang, M., Cui, S.
Deposit date:2016-07-20
Release date:2017-06-07
Last modified:2017-09-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the receptor binding domain of the spike glycoprotein of human betacoronavirus HKU1
Nat Commun, 8, 2017
5EW5
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CRYSTAL STRUCTURE OF COLICIN E9 IN COMPLEX WITH ITS IMMUNITY PROTEIN IM9
Descriptor:Colicin-E9, Colicin-E9 immunity protein
Authors:Klein, A., Wojdyla, J.A., Kleanthous, C.
Deposit date:2015-11-20
Release date:2016-07-20
Last modified:2016-09-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural and biophysical analysis of nuclease protein antibiotics.
Biochem.J., 473, 2016
5BY4
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STRUCTURE AND FUNCTION OF THE ESCHERICHIA COLI TOL-PAL STATOR PROTEIN TOLR
Descriptor:Protein TolR, SODIUM ION
Authors:Wojdyla, J.A., Kaminska, R., Kleanthous, C.
Deposit date:2015-06-10
Release date:2015-09-16
Last modified:2015-11-11
Method:X-RAY DIFFRACTION (1.702 Å)
Cite:Structure and Function of the Escherichia coli Tol-Pal Stator Protein TolR.
J.Biol.Chem., 290, 2015
4UHQ
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CRYSTAL STRUCTURE OF THE PYOCIN AP41 DNASE
Descriptor:LARGE COMPONENT OF PYOCIN AP41, CITRIC ACID, NICKEL (II) ION
Authors:Joshi, A., Chen, S., Wojdyla, J.A., Kaminska, R., Kleanthous, C.
Deposit date:2015-03-25
Release date:2015-08-05
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structures of the Ultra-High Affinity Protein-Protein Complexes of Pyocins S2 and Ap41 and Their Cognate Immunity Proteins from Pseudomonas Aeruginosa
J.Mol.Biol., 427, 2015
4UHP
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CRYSTAL STRUCTURE OF THE PYOCIN AP41 DNASE-IMMUNITY COMPLEX
Descriptor:LARGE COMPONENT OF PYOCIN AP41, BACTERIOCIN IMMUNITY PROTEIN
Authors:Joshi, A., Chen, S., Wojdyla, J.A., Kaminska, R., Kleanthous, C.
Deposit date:2015-03-25
Release date:2015-08-05
Last modified:2015-09-02
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of the Ultra-High Affinity Protein-Protein Complexes of Pyocins S2 and Ap41 and Their Cognate Immunity Proteins from Pseudomonas Aeruginosa
J.Mol.Biol., 427, 2015
4QAY
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CRYSTAL STRUCTURE OF TAMA POTRA DOMAINS
Descriptor:Translocation and assembly module TamA, PHOSPHATE ION
Authors:Wojdyla, J.A., Mosbahi, K., Walker, D., Kleanthous, C.
Deposit date:2014-05-06
Release date:2015-11-18
Last modified:2018-06-20
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Recognition of autotransporter passenger domains by the TAM complex
To be Published
4JML
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CRYSTAL STRUCTURE OF THE TOLB(P201C)-COLICINE9 TBE PEPTIDE(A33C) COMPLEX.
Descriptor:Protein TolB, Colicin-E9, CALCIUM ION
Authors:Wojdyla, J.A., Klein, A., Kleanthous, C.
Deposit date:2013-03-14
Release date:2013-07-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Intrinsically disordered protein threads through the bacterial outer-membrane porin OmpF.
Science, 340, 2013
3U43
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CRYSTAL STRUCTURE OF THE COLICIN E2 DNASE-IM2 COMPLEX
Descriptor:Colicin-E2 immunity protein, Colicin-E2, ZINC ION, ...
Authors:Wojdyla, J.A., Kleanthous, C.
Deposit date:2011-10-07
Release date:2012-03-21
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structure of the Ultra-High-Affinity Colicin E2 DNase-Im2 Complex.
J.Mol.Biol., 417, 2012
3TIQ
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CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS SASG G51-E-G52 MODULE
Descriptor:Surface protein G, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION
Authors:Gruszka, D.T., Wojdyla, J.A., Turkenburg, J.P., Potts, J.R.
Deposit date:2011-08-21
Release date:2012-04-18
Last modified:2012-05-09
Method:X-RAY DIFFRACTION (1.8739 Å)
Cite:Staphylococcal biofilm-forming protein has a contiguous rod-like structure.
Proc.Natl.Acad.Sci.USA, 109, 2012
3TIP
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CRYSTAL STRUCTURE OF STAPHYLOCOCCUS AUREUS SASG E-G52 MODULE
Descriptor:Surface protein G
Authors:Gruszka, D.T., Wojdyla, J.A., Turkenburg, J.P., Potts, J.R.
Deposit date:2011-08-21
Release date:2012-04-18
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.7009 Å)
Cite:Staphylococcal biofilm-forming protein has a contiguous rod-like structure.
Proc.Natl.Acad.Sci.USA, 109, 2012
3O0E
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CRYSTAL STRUCTURE OF OMPF IN COMPLEX WITH COLICIN PEPTIDE OBS1
Descriptor:Outer membrane porin 1a (Ia;b;F), Colicin-E9, B-OCTYLGLUCOSIDE
Authors:Wojdyla, J.A., Housden, N.G., Korczynska, J., Grishkovskaya, I., Kirkpatrick, N., Brzozowski, A.M., Kleanthous, C.
Deposit date:2010-07-19
Release date:2010-12-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.014 Å)
Cite:Directed epitope delivery across the Escherichia coli outer membrane through the porin OmpF.
Proc.Natl.Acad.Sci.USA, 107, 2010
3MP2
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CRYSTAL STRUCTURE OF TRANSMISSIBLE GASTROENTERITIS VIRUS PAPAIN-LIKE PROTEASE 1
Descriptor:Non-structural protein 3, ZINC ION
Authors:Wojdyla, J.A., Manolaridis, I., Tucker, P.A.
Deposit date:2010-04-24
Release date:2010-09-08
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Papain-Like Protease 1 from Transmissible Gastroenteritis Virus: Crystal Structure and Enzymatic Activity toward Viral and Cellular Substrates.
J.Virol., 84, 2010
3JZT
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STRUCTURE OF A CUBIC CRYSTAL FORM OF X (ADRP) DOMAIN FROM FCOV WITH ADP-RIBOSE
Descriptor:macro domain of Non-structural protein 3, CHLORIDE ION, ADENOSINE-5-DIPHOSPHORIBOSE, ...
Authors:Wojdyla, J.A., Manolaridis, I., Tucker, P.A.
Deposit date:2009-09-24
Release date:2010-01-12
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.91 Å)
Cite:Structure of the X (ADRP) domain of nsp3 from feline coronavirus
Acta Crystallogr.,Sect.D, 65, 2009
3GZF
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STRUCTURE OF THE C-TERMINAL DOMAIN OF NSP4 FROM FELINE CORONAVIRUS
Descriptor:Replicase polyprotein 1ab, SULFATE ION
Authors:Manolaridis, I., Wojdyla, J.A., Panjikar, S., Snijder, E.J., Gorbalenya, A.E., Coutard, B., Tucker, P.A.
Deposit date:2009-04-07
Release date:2009-08-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.756 Å)
Cite:Structure of the C-terminal domain of nsp4 from feline coronavirus
Acta Crystallogr.,Sect.D, 65, 2009
3EW5
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STRUCTURE OF THE TETRAGONAL CRYSTAL FORM OF X (ADRP) DOMAIN FROM FCOV
Descriptor:macro domain of Non-structural protein 3, CHLORIDE ION, SULFATE ION, ...
Authors:Wojdyla, J.A., Manolaridis, I., Tucker, P.A.
Deposit date:2008-10-14
Release date:2009-10-27
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the X (ADRP) domain of nsp3 from feline coronavirus
Acta Crystallogr.,Sect.D, 65, 2009
3ETI
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STRUCTURE OF A CUBIC CRYSTAL FORM OF X (ADRP) DOMAIN FROM FCOV
Descriptor:macro domain of Non-structural protein 3
Authors:Wojdyla, J.A., Manolaridis, I., Tucker, P.A.
Deposit date:2008-10-08
Release date:2009-10-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the X (ADRP) domain of nsp3 from feline coronavirus
Acta Crystallogr.,Sect.D, 65, 2009