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4R2S
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BU of 4r2s by Molmil
Wilms Tumor Protein (WT1) Q369P zinc fingers in complex with methylated DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*(5CM)P*GP*T)-3'), DNA (5'-D(*TP*AP*(5CM)P*GP*CP*CP*CP*AP*CP*GP*C)-3'), ...
Authors:Hashimoto, H, Olanrewaju, Y.O, Zheng, Y, Wilson, G.G, Zhang, X, Cheng, X.
Deposit date:2014-08-12
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.489 Å)
Cite:Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence.
Genes Dev., 28, 2014
4R2Q
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BU of 4r2q by Molmil
Wilms Tumor Protein (WT1) zinc fingers in complex with formylated DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*(5FC)P*GP*T)-3'), DNA (5'-D(*TP*AP*(5FC)P*GP*CP*CP*CP*AP*CP*GP*C)-3'), ...
Authors:Hashimoto, H, Olanrewaju, Y.O, Zheng, Y, Wilson, G.G, Zhang, X, Cheng, X.
Deposit date:2014-08-12
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence.
Genes Dev., 28, 2014
5EH2
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BU of 5eh2 by Molmil
Human PRDM9 allele-A ZnF Domain with Associated Recombination Hotspot DNA Sequence III
Descriptor: DNA (5'-D(*AP*CP*AP*CP*GP*TP*GP*GP*CP*TP*AP*GP*GP*GP*AP*GP*GP*CP*CP*TP*C)-3'), DNA (5'-D(*TP*GP*AP*GP*GP*CP*CP*TP*CP*CP*CP*TP*AP*GP*CP*CP*AP*CP*GP*TP*G)-3'), Histone-lysine N-methyltransferase PRDM9, ...
Authors:Patel, A, Horton, J.R, Wilson, G.G, Zhang, X, Cheng, X.
Deposit date:2015-10-27
Release date:2016-02-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for human PRDM9 action at recombination hot spots.
Genes Dev., 30, 2016
5EI9
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BU of 5ei9 by Molmil
Human PRDM9 allele-A ZnF Domain with Associated Recombination Hotspot DNA Sequence I
Descriptor: DNA (5'-D(*AP*TP*CP*CP*AP*CP*GP*TP*GP*GP*CP*TP*AP*GP*GP*GP*AP*GP*GP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*CP*CP*TP*CP*CP*CP*TP*AP*GP*CP*CP*AP*CP*GP*TP*GP*GP*A)-3'), Histone-lysine N-methyltransferase PRDM9, ...
Authors:Patel, A, Horton, J.R, Wilson, G.G, Zhang, X, Cheng, X.
Deposit date:2015-10-29
Release date:2016-02-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.921 Å)
Cite:Structural basis for human PRDM9 action at recombination hot spots.
Genes Dev., 30, 2016
5EGB
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BU of 5egb by Molmil
Human PRDM9 allele-A ZnF Domain with Associated Recombination Hotspot DNA Sequence II
Descriptor: DNA (5'-D(*AP*CP*CP*AP*CP*GP*TP*GP*GP*CP*TP*AP*GP*GP*GP*AP*GP*GP*CP*CP*T)-3'), DNA (5'-D(*TP*AP*GP*GP*CP*CP*TP*CP*CP*CP*TP*AP*GP*CP*CP*AP*CP*GP*TP*GP*G)-3'), Histone-lysine N-methyltransferase PRDM9, ...
Authors:Patel, A, Horton, J.R, Wilson, G.G, Zhang, X, Cheng, X.
Deposit date:2015-10-26
Release date:2016-02-17
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.977 Å)
Cite:Structural basis for human PRDM9 action at recombination hot spots.
Genes Dev., 30, 2016
5HR4
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BU of 5hr4 by Molmil
Structure of Type IIL restriction-modification enzyme MmeI in complex with DNA has implications for engineering of new specificities
Descriptor: CALCIUM ION, DNA (5'-D(P*GP*TP*TP*AP*TP*GP*TP*CP*GP*GP*AP*TP*A)-3'), DNA (5'-D(P*TP*AP*TP*CP*CP*GP*AP*CP*AP*TP*AP*AP*C)-3'), ...
Authors:Callahan, S.J, Luyten, Y.A, Gupta, Y.K, Wilson, G.G, Roberts, R.J, Morgan, R.D, Aggarwal, A.K.
Deposit date:2016-01-22
Release date:2016-04-27
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.5964 Å)
Cite:Structure of Type IIL Restriction-Modification Enzyme MmeI in Complex with DNA Has Implications for Engineering New Specificities.
Plos Biol., 14, 2016
4R2E
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BU of 4r2e by Molmil
Wilms Tumor Protein (WT1) zinc fingers in complex with methylated DNA
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*(5CM)P*GP*T)-3'), DNA (5'-D(*TP*AP*(5CM)P*GP*CP*CP*CP*AP*CP*GP*C)-3'), Wilms tumor protein, ...
Authors:Hashimoto, H, Olanrewaju, Y.O, Zheng, Y, Wilson, G.G, Zhang, X, Cheng, X.
Deposit date:2014-08-11
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence.
Genes Dev., 28, 2014
4R2R
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BU of 4r2r by Molmil
Wilms Tumor Protein (WT1) zinc fingers in complex with carboxylated DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*(1CC)P*GP*T)-3'), DNA (5'-D(*TP*AP*(5CM)P*GP*CP*CP*CP*AP*CP*GP*C)-3'), ...
Authors:Hashimoto, H, Olanrewaju, Y.O, Zheng, Y, Wilson, G.G, Zhang, X, Cheng, X.
Deposit date:2014-08-12
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.089 Å)
Cite:Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence.
Genes Dev., 28, 2014
4R2A
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BU of 4r2a by Molmil
Egr1/Zif268 zinc fingers in complex with methylated DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*(5CM)P*GP*T)-3'), DNA (5'-D(*TP*AP*(5CM)P*GP*CP*CP*CP*AP*CP*GP*C)-3'), ...
Authors:Hashimoto, H, Olanrewaju, Y.O, Zheng, Y, Wilson, G.G, Zhang, X, Cheng, X.
Deposit date:2014-08-11
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.591 Å)
Cite:Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence.
Genes Dev., 28, 2014
4R2D
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BU of 4r2d by Molmil
Egr1/Zif268 zinc fingers in complex with formylated DNA
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*(5FC)P*GP*T)-3'), DNA (5'-D(*TP*AP*(5FC)P*GP*CP*CP*CP*AP*CP*GP*C)-3'), Early growth response protein 1, ...
Authors:Hashimoto, H, Olanrewaju, Y.O, Zheng, Y, Wilson, G.G, Zhang, X, Cheng, X.
Deposit date:2014-08-11
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.088 Å)
Cite:Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence.
Genes Dev., 28, 2014
4R2P
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BU of 4r2p by Molmil
Wilms Tumor Protein (WT1) zinc fingers in complex with hydroxymethylated DNA
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*(5HC)P*GP*T)-3'), DNA (5'-D(*TP*AP*(5HC)P*GP*CP*CP*CP*AP*CP*GP*C)-3'), ...
Authors:Hashimoto, H, Olanrewaju, Y.O, Zheng, Y, Wilson, G.G, Zhang, X, Cheng, X.
Deposit date:2014-08-12
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.788 Å)
Cite:Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence.
Genes Dev., 28, 2014
4R2C
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BU of 4r2c by Molmil
Egr1/Zif268 zinc fingers in complex with hydroxymethylated DNA
Descriptor: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*(5HC)P*GP*T)-3'), DNA (5'-D(*TP*AP*(5HC)P*GP*CP*CP*CP*AP*CP*GP*C)-3'), Early growth response protein 1, ...
Authors:Hashimoto, H, Olanrewaju, Y.O, Zheng, Y, Wilson, G.G, Zhang, X, Cheng, X.
Deposit date:2014-08-11
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Wilms tumor protein recognizes 5-carboxylcytosine within a specific DNA sequence.
Genes Dev., 28, 2014
1YNM
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BU of 1ynm by Molmil
Crystal structure of restriction endonuclease HinP1I
Descriptor: R.HinP1I restriction endonuclease
Authors:Yang, Z, Horton, J.R, Maunus, R, Wilson, G.G, Roberts, R.J, Cheng, X.
Deposit date:2005-01-24
Release date:2005-05-03
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structure of HinP1I endonuclease reveals a striking similarity to the monomeric restriction enzyme MspI
Nucleic Acids Res., 33, 2005
5TH3
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BU of 5th3 by Molmil
Restriction/modification system-Type II R.SwaI cleaved DNA complex
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, DNA (cleaved 25-MER, ...
Authors:Shen, B.W, Stoddard, B.L.
Deposit date:2016-09-29
Release date:2016-12-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:DNA recognition by the SwaI restriction endonuclease involves unusual distortion of an 8 base pair A:T-rich target.
Nucleic Acids Res., 45, 2017
4R28
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BU of 4r28 by Molmil
MspJI Restriction Endonuclease in Complex with 27-mer Oligonucleotide
Descriptor: DNA (25-MER), DNA (26-MER), Restriction endonuclease
Authors:Horton, J.R, Cheng, X.
Deposit date:2014-08-10
Release date:2014-10-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.055 Å)
Cite:Modification-dependent restriction endonuclease, MspJI, flips 5-methylcytosine out of the DNA helix.
Nucleic Acids Res., 42, 2014
2FKC
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BU of 2fkc by Molmil
Crystal Form I of Pre-Reactive Complex of Restriction Endonuclease HinP1I with Cognate DNA and Calcium Ion
Descriptor: 5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3', CALCIUM ION, R.HinP1I restriction endonuclease
Authors:Horton, J.R.
Deposit date:2006-01-04
Release date:2006-02-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion.
Nucleic Acids Res., 34, 2006
2FLC
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BU of 2flc by Molmil
Post-Reactive Complex of Restriction Endonuclease HinP1I with Nicked Cognate DNA and Magnesium Ions
Descriptor: 5'-D(*CP*CP*AP*G)-3', 5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3', 5'-D(P*CP*GP*CP*TP*GP*G)-3', ...
Authors:Horton, J.R.
Deposit date:2006-01-05
Release date:2006-02-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion.
Nucleic Acids Res., 34, 2006
2FKH
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BU of 2fkh by Molmil
Crystal Form II of Pre-Reactive Complex of Restriction Endonuclease HinP1I with Cognate DNA and Calcium Ions
Descriptor: 5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3', CALCIUM ION, R.HinP1I Restriction Endonuclease
Authors:Horton, J.R.
Deposit date:2006-01-04
Release date:2006-02-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion.
Nucleic Acids Res., 34, 2006
2FL3
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BU of 2fl3 by Molmil
Binary Complex of Restriction Endonuclease HinP1I with Cognate DNA
Descriptor: 5'-D(*CP*CP*AP*GP*CP*GP*CP*TP*GP*G)-3', R.HinP1I Restriction Endonuclease
Authors:Horton, J.R.
Deposit date:2006-01-05
Release date:2006-02-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:DNA nicking by HinP1I endonuclease: bending, base flipping and minor groove expansion.
Nucleic Acids Res., 34, 2006
3LDY
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BU of 3ldy by Molmil
An extraordinary mechanism of DNA perturbation exhibited by the rare-cutting HNH restriction endonuclease PacI
Descriptor: CALCIUM ION, DNA (5'-D(*GP*AP*GP*GP*CP*TP*TP*A)-3'), DNA (5'-D(P*AP*TP*TP*AP*AP*GP*CP*CP*TP*C)-3'), ...
Authors:Shen, B.W, Heiter, D, Chan, S.-H, Xu, S.-Y, Wilson, G, Stoddard, B.L.
Deposit date:2010-01-13
Release date:2010-04-21
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Unusual target site disruption by the rare-cutting HNH restriction endonuclease PacI.
Structure, 18, 2010
6MAF
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BU of 6maf by Molmil
native BbvCI A2B2 tetramer at low resolution
Descriptor: BbvCI endonuclease subunit 1, BbvCI endonuclease subunit 2
Authors:Shen, B.W, Stoddard, B.L.
Deposit date:2018-08-27
Release date:2018-11-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.79 Å)
Cite:Structure, subunit organization and behavior of the asymmetric Type IIT restriction endonuclease BbvCI.
Nucleic Acids Res., 47, 2019
6M9G
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BU of 6m9g by Molmil
BbvCI B2 dimer with Ta6Br14 clusters
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, BROMIDE ION, ...
Authors:Shen, B.W, Stoddard, B.L.
Deposit date:2018-08-23
Release date:2018-11-14
Last modified:2023-06-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structure, subunit organization and behavior of the asymmetric Type IIT restriction endonuclease BbvCI.
Nucleic Acids Res., 47, 2019
6MAG
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BU of 6mag by Molmil
native BbvCI B2 dimer in space group C222
Descriptor: ACETATE ION, BbvCI endonuclease subunit 2, GLYCEROL, ...
Authors:Shen, B.W, Stoddard, B.L.
Deposit date:2018-08-27
Release date:2018-11-14
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structure, subunit organization and behavior of the asymmetric Type IIT restriction endonuclease BbvCI.
Nucleic Acids Res., 47, 2019
4PAR
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BU of 4par by Molmil
The 5-Hydroxymethylcytosine-Specific Restriction Enzyme AbaSI in a Complex with Product-like DNA
Descriptor: 1,2-ETHANEDIOL, DNA 14-MER, DNA 18-MER, ...
Authors:Horton, J.R, Cheng, X.
Deposit date:2014-04-09
Release date:2014-06-25
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Structure of 5-hydroxymethylcytosine-specific restriction enzyme, AbaSI, in complex with DNA.
Nucleic Acids Res., 42, 2014
6UKG
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BU of 6ukg by Molmil
HhaI endonuclease in Complex With DNA in space group P21 (pH 4.2)
Descriptor: 1,2-ETHANEDIOL, DNA (5'-D(*CP*CP*AP*AP*GP*CP*GP*CP*AP*AP*CP*AP*G)-3'), DNA (5'-D(*CP*TP*GP*TP*TP*GP*CP*GP*CP*TP*TP*GP*GP*A)-3'), ...
Authors:Horton, J.R, Cheng, X.
Deposit date:2019-10-04
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:Structure of HhaI endonuclease with cognate DNA at an atomic resolution of 1.0 angstrom.
Nucleic Acids Res., 48, 2020

 

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