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1Z9B
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BU of 1z9b by Molmil
Solution structure of the C1-subdomain of Bacillus stearothermophilus translation initiation factor IF2
Descriptor: Translation initiation factor IF-2
Authors:Wienk, H, Tomaselli, S, Bernard, C, Spurio, R, Picone, D, Gualerzi, C.O, Boelens, R.
Deposit date:2005-04-01
Release date:2005-08-30
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of the C1-subdomain of Bacillus stearothermophilus translation initiation factor IF2
Protein Sci., 14, 2005
2LYH
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BU of 2lyh by Molmil
Structure of Faap24 residues 141-215
Descriptor: Fanconi anemia-associated protein of 24 kDa
Authors:Wienk, H, Slootweg, J, Kaptein, R, Boelens, R, Folkers, G.E.
Deposit date:2012-09-18
Release date:2013-05-01
Last modified:2013-08-07
Method:SOLUTION NMR
Cite:The Fanconi anemia associated protein FAAP24 uses two substrate specific binding surfaces for DNA recognition.
Nucleic Acids Res., 41, 2013
2GHF
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BU of 2ghf by Molmil
Solution structure of the complete zinc-finger region of human zinc-fingers and homeoboxes 1 (ZHX1)
Descriptor: ZINC ION, Zinc fingers and homeoboxes protein 1
Authors:Wienk, H, Structural Proteomics in Europe (SPINE)
Deposit date:2006-03-27
Release date:2006-04-11
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Solution structure of the zinc-finger region of human zinc-fingers and homeoboxes 1 (ZHX1)
To be Published
2LKC
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BU of 2lkc by Molmil
Free B.st IF2-G2
Descriptor: Translation initiation factor IF-2
Authors:Wienk, H, Tishchenko, E, Belardinelli, R, Tomaselli, S, Dongre, R, Spurio, R, Folkers, G.E, Gualerzi, C.O, Boelens, R.
Deposit date:2011-10-10
Release date:2012-02-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Dynamics of Bacterial Translation Initiation Factor IF2.
J.Biol.Chem., 287, 2012
2LKD
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BU of 2lkd by Molmil
IF2-G2 GDP complex
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Translation initiation factor IF-2
Authors:Wienk, H, Tishchenko, E, Belardinelli, R, Tomaselli, S, Dongre, R, Spurio, R, Folkers, G.E, Gualerzi, C.O, Boelens, R.
Deposit date:2011-10-10
Release date:2012-02-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Dynamics of Bacterial Translation Initiation Factor IF2.
J.Biol.Chem., 287, 2012
2MH3
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BU of 2mh3 by Molmil
NMR structure of the basic helix-loop-helix region of the transcriptional repressor HES-1
Descriptor: Transcription factor HES-1
Authors:Wienk, H, Popovic, M, Coglievina, M, Boelens, R, Pongor, S, Pintar, A.
Deposit date:2013-11-15
Release date:2014-02-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The basic helix-loop-helix region of the transcriptional repressor hairy and enhancer of split 1 is preorganized to bind DNA.
Proteins, 82, 2014
1PM6
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BU of 1pm6 by Molmil
Solution Structure of Full-Length Excisionase (Xis) from Bacteriophage HK022
Descriptor: Excisionase
Authors:Rogov, V.V, Luecke, C, Muresanu, L, Wienk, H, Kleinhaus, I, Werner, K, Loehr, F, Pristovsek, P, Rueterjans, H.
Deposit date:2003-06-10
Release date:2003-12-30
Last modified:2021-10-27
Method:SOLUTION NMR
Cite:Solution structure and stability of the full-length excisionase from bacteriophage HK022.
Eur.J.Biochem., 270, 2003
1QXN
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BU of 1qxn by Molmil
Solution Structure of the 30 kDa Polysulfide-sulfur Transferase Homodimer from Wolinella Succinogenes
Descriptor: PENTASULFIDE-SULFUR, sulfide dehydrogenase
Authors:Lin, Y.J, Dancea, F, Loehr, F, Klimmek, O, Pfeiffer-Marek, S, Nilges, M, Wienk, H, Kroeger, A, Rueterjans, H.
Deposit date:2003-09-08
Release date:2004-02-24
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution Structure of the 30 kDa Polysulfide-Sulfur Transferase Homodimer from Wolinella succinogenes
Biochemistry, 43, 2004
4B5E
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BU of 4b5e by Molmil
Crystal Structure of an amyloid-beta binding single chain antibody PS2-8
Descriptor: GLYCEROL, PS2-8, SULFATE ION
Authors:Beringer, D.X, Dorresteijn, B, Rutten, L, Wienk, H, el Khattabi, M, Kroon-Batenburg, L.M.J, Verrips, C.T.
Deposit date:2012-08-03
Release date:2013-08-21
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.936 Å)
Cite:Amyloid-Beta Binding Single Chain Antibody Ps2-8
To be Published
4B41
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BU of 4b41 by Molmil
Crystal structure of an amyloid-beta binding single chain antibody G7
Descriptor: ANTIBODY G7, CHLORIDE ION, GLYCEROL
Authors:Beringer, D.X, Dorresteijn, B, Rutten, L, Wienk, H, el Khattabi, M, Kroon-Batenburg, L.M.J, Verrips, C.T.
Deposit date:2012-07-27
Release date:2013-08-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.191 Å)
Cite:Crystal Structure of an Amyloid-Beta Binding Single Chain Antibody G7
To be Published
2K16
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BU of 2k16 by Molmil
Solution structure of the free TAF3 PHD domain
Descriptor: Transcription initiation factor TFIID subunit 3, ZINC ION
Authors:van Ingen, H, van Schaik, F.M.A, Wienk, H, Timmers, M, Boelens, R.
Deposit date:2008-02-22
Release date:2008-07-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Recognition of the H3K4me3 mark by the TAF3-PHD finger
To be Published
2K17
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BU of 2k17 by Molmil
Solution structure of the TAF3 PHD domain in complex with a H3K4me3 peptide
Descriptor: H3K4me3 peptide, Transcription initiation factor TFIID subunit 3, ZINC ION
Authors:van Ingen, H, van Schaik, F.M.A, Wienk, H, Timmers, M, Boelens, R.
Deposit date:2008-02-22
Release date:2008-07-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Recognition of the H3K4me3 mark by the TAF3-PHD finger
To be Published
2JVF
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BU of 2jvf by Molmil
Solution structure of M7, a computationally-designed artificial protein
Descriptor: de novo protein M7
Authors:Stordeur, C, Dalluege, R, Birkenmeier, O, Wienk, H, Rudolph, R, Lange, C, Luecke, C.
Deposit date:2007-09-19
Release date:2008-08-12
Last modified:2020-02-19
Method:SOLUTION NMR
Cite:The NMR solution structure of the artificial protein M7 matches the computationally designed model
Proteins, 72, 2008
2L0T
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BU of 2l0t by Molmil
Solution structure of the complex of ubiquitin and the VHS domain of Stam2
Descriptor: Signal transducing adapter molecule 2, Ubiquitin
Authors:Lange, A, Hoeller, D, Wienk, H, Marcillat, O, Lancelin, J, Walker, O.
Deposit date:2010-07-15
Release date:2010-12-15
Last modified:2012-03-14
Method:SOLUTION NMR
Cite:NMR reveals a different mode of binding of the Stam2 VHS domain to ubiquitin and diubiquitin.
Biochemistry, 50, 2011
2LRD
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BU of 2lrd by Molmil
The solution structure of the monomeric Acanthaporin
Descriptor: Acanthaporin
Authors:Michalek, M, Soennichsen, F.D, Wechselberger, R, Dingley, A.J, Wienk, H, Simanski, M, Herbst, R, Lorenzen, I, Marciano-Cabral, F, Gelhaus, C, Groetzinger, J, Leippe, M.
Deposit date:2012-03-28
Release date:2012-05-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and function of a unique pore-forming protein from a pathogenic acanthamoeba.
Nat.Chem.Biol., 9, 2013
2LRE
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BU of 2lre by Molmil
The solution structure of the dimeric Acanthaporin
Descriptor: Acanthaporin
Authors:Michalek, M, Soennichsen, F.D, Wechselberger, R, Dingley, A.J, Wienk, H, Simanski, M, Herbst, R, Lorenzen, I, Marciano-Cabral, F, Gelhaus, C, Groetzinger, J, Leippe, M.
Deposit date:2012-03-28
Release date:2012-05-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structure and function of a unique pore-forming protein from a pathogenic acanthamoeba.
Nat.Chem.Biol., 9, 2013
2NBG
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BU of 2nbg by Molmil
Structure of the Geobacillus stearothermophilus IF2 G3-subdomain
Descriptor: Translation initiation factor IF-2
Authors:Dongre, R, Folkers, G.E, Gualerzi, C.O, Boelens, R, Wienk, H.
Deposit date:2016-02-11
Release date:2016-07-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:A model for the interaction of the G3-subdomain of Geobacillus stearothermophilus IF2 with the 30S ribosomal subunit.
Protein Sci., 25, 2016
2N01
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BU of 2n01 by Molmil
NMR structure of VirB9 C-terminal domain in complex with VirB7 N-terminal domain from Xanthomonas citri's T4SS
Descriptor: VirB7 protein, VirB9 protein
Authors:Oliveira, L.C, Souza, D.P, Salinas, R.K, Wienk, H, Boelens, R, Farah, S.C.
Deposit date:2015-03-03
Release date:2015-09-09
Last modified:2016-10-19
Method:SOLUTION NMR
Cite:VirB7 and VirB9 Interactions Are Required for the Assembly and Antibacterial Activity of a Type IV Secretion System.
Structure, 24, 2016
2MUT
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BU of 2mut by Molmil
Solution structure of the F231L mutant ERCC1-XPF dimerization region
Descriptor: DNA excision repair protein ERCC-1, DNA repair endonuclease XPF
Authors:Faridounnia, M, Wienk, H, Kovacic, L, Folkers, G.E, Jaspers, N.G.J, Kaptein, R, Hoeijmakers, J.H.J, Boelens, R.
Deposit date:2014-09-17
Release date:2015-06-24
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Cerebro-oculo-facio-skeletal Syndrome Point Mutation F231L in the ERCC1 DNA Repair Protein Causes Dissociation of the ERCC1-XPF Complex.
J.Biol.Chem., 290, 2015
2K4D
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BU of 2k4d by Molmil
E2-c-Cbl recognition is necessary but not sufficient for ubiquitination activity
Descriptor: E3 ubiquitin-protein ligase CBL, ZINC ION
Authors:Huang, A, De Jong, R.N, Wienk, H, Winkler, S.G, Timmers, H.T.M, Boelens, R.
Deposit date:2008-06-06
Release date:2009-01-20
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:E2-c-Cbl recognition is necessary but not sufficient for ubiquitination activity
J.Mol.Biol., 385, 2009
2KEI
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BU of 2kei by Molmil
Refined Solution Structure of a Dimer of LAC repressor DNA-Binding domain complexed to its natural operator O1
Descriptor: DNA (5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*GP*AP*TP*AP*AP*CP*AP*AP*TP*TP*T)-3'), DNA (5'-D(P*AP*AP*AP*TP*TP*GP*TP*TP*AP*TP*CP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*TP*C)-3'), Lactose operon repressor
Authors:Romanuka, J, Folkers, G, Biris, N, Tishchenko, E, Wienk, H, Kaptein, R, Boelens, R.
Deposit date:2009-01-30
Release date:2009-05-19
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
2KEK
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BU of 2kek by Molmil
Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O3
Descriptor: DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*GP*AP*GP*CP*GP*CP*AP*AP*CP*GP*CP*AP*AP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*TP*TP*GP*CP*GP*TP*TP*GP*CP*GP*CP*TP*CP*AP*CP*TP*GP*CP*CP*G)-3'), Lactose operon repressor
Authors:Romanuka, J, Folkers, G, Biris, N, Tishchenko, E, Wienk, H, Kaptein, R, Boelens, R.
Deposit date:2009-01-30
Release date:2009-05-19
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
2KEJ
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BU of 2kej by Molmil
Solution structure of a dimer of LAC repressor DNA-binding domain complexed to its natural operator O2
Descriptor: DNA (5'-D(*GP*AP*AP*AP*TP*GP*TP*GP*AP*GP*CP*GP*AP*GP*TP*AP*AP*CP*AP*AP*CP*CP*G)-3'), DNA (5'-D(P*CP*GP*GP*TP*TP*GP*TP*TP*AP*CP*TP*CP*GP*CP*TP*CP*AP*CP*AP*TP*TP*TP*C)-3'), Lactose operon repressor
Authors:Romanuka, J, Folkers, G, Biris, N, Tishchenko, E, Wienk, H, Kaptein, R, Boelens, R.
Deposit date:2009-01-30
Release date:2009-05-19
Last modified:2021-10-20
Method:SOLUTION NMR
Cite:Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
6YN1
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BU of 6yn1 by Molmil
Crystal structure of histone chaperone APLF acidic domain bound to the histone H2A-H2B-H3-H4 octamer
Descriptor: Aprataxin and PNK-like factor, CHLORIDE ION, GLYCEROL, ...
Authors:Corbeski, I, Guo, X, Van Ingen, H, Sixma, T.K.
Deposit date:2020-04-10
Release date:2021-11-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Chaperoning of the histone octamer by the acidic domain of DNA repair factor APLF.
Sci Adv, 8, 2022
3KGR
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BU of 3kgr by Molmil
Crystal structure of the human leukocyte-associated Ig-like receptor-1 (LAIR-1)
Descriptor: GLYCEROL, GLYCINE, Leukocyte-associated immunoglobulin-like receptor 1
Authors:Brondijk, T.H.C, Huizinga, E.G, Ballering, J.
Deposit date:2009-10-29
Release date:2009-12-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure and collagen-binding site of immune inhibitory receptor LAIR-1: unexpected implications for collagen binding by platelet receptor GPVI
Blood, 115, 2010

 

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