Author results

1Z9B
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SOLUTION STRUCTURE OF THE C1-SUBDOMAIN OF BACILLUS STEAROTHERMOPHILUS TRANSLATION INITIATION FACTOR IF2
Descriptor:Translation initiation factor IF-2
Authors:Wienk, H., Tomaselli, S., Bernard, C., Spurio, R., Picone, D., Gualerzi, C.O., Boelens, R.
Deposit date:2005-04-01
Release date:2005-08-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the C1-subdomain of Bacillus stearothermophilus translation initiation factor IF2
Protein Sci., 14, 2005
2GHF
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SOLUTION STRUCTURE OF THE COMPLETE ZINC-FINGER REGION OF HUMAN ZINC-FINGERS AND HOMEOBOXES 1 (ZHX1)
Descriptor:Zinc fingers and homeoboxes protein 1, ZINC ION
Authors:Wienk, H., Structural Proteomics in Europe (SPINE)
Deposit date:2006-03-27
Release date:2006-04-11
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure of the zinc-finger region of human zinc-fingers and homeoboxes 1 (ZHX1)
To be Published
2LKC
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FREE B.ST IF2-G2
Descriptor:Translation initiation factor IF-2
Authors:Wienk, H., Tishchenko, E., Belardinelli, R., Tomaselli, S., Dongre, R., Spurio, R., Folkers, G.E., Gualerzi, C.O., Boelens, R.
Deposit date:2011-10-10
Release date:2012-02-15
Last modified:2012-07-18
Method:SOLUTION NMR
Cite:Structural Dynamics of Bacterial Translation Initiation Factor IF2.
J.Biol.Chem., 287, 2012
2LKD
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IF2-G2 GDP COMPLEX
Descriptor:Translation initiation factor IF-2, GUANOSINE-5'-DIPHOSPHATE
Authors:Wienk, H., Tishchenko, E., Belardinelli, R., Tomaselli, S., Dongre, R., Spurio, R., Folkers, G.E., Gualerzi, C.O., Boelens, R.
Deposit date:2011-10-10
Release date:2012-02-15
Last modified:2012-07-18
Method:SOLUTION NMR
Cite:Structural Dynamics of Bacterial Translation Initiation Factor IF2.
J.Biol.Chem., 287, 2012
2LYH
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STRUCTURE OF FAAP24 RESIDUES 141-215
Descriptor:Fanconi anemia-associated protein of 24 kDa
Authors:Wienk, H., Slootweg, J., Kaptein, R., Boelens, R., Folkers, G.E.
Deposit date:2012-09-18
Release date:2013-05-01
Last modified:2013-08-07
Method:SOLUTION NMR
Cite:The Fanconi anemia associated protein FAAP24 uses two substrate specific binding surfaces for DNA recognition.
Nucleic Acids Res., 41, 2013
2MH3
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NMR STRUCTURE OF THE BASIC HELIX-LOOP-HELIX REGION OF THE TRANSCRIPTIONAL REPRESSOR HES-1
Descriptor:Transcription factor HES-1
Authors:Wienk, H., Popovic, M., Coglievina, M., Boelens, R., Pongor, S., Pintar, A.
Deposit date:2013-11-15
Release date:2014-02-05
Last modified:2014-03-26
Method:SOLUTION NMR
Cite:The basic helix-loop-helix region of the transcriptional repressor hairy and enhancer of split 1 is preorganized to bind DNA.
Proteins, 82, 2014
2K16
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SOLUTION STRUCTURE OF THE FREE TAF3 PHD DOMAIN
Descriptor:Transcription initiation factor TFIID subunit 3, ZINC ION
Authors:van Ingen, H., van Schaik, F.M.A., Wienk, H., Timmers, M., Boelens, R.
Deposit date:2008-02-22
Release date:2008-07-15
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Recognition of the H3K4me3 mark by the TAF3-PHD finger
To be Published
2K17
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SOLUTION STRUCTURE OF THE TAF3 PHD DOMAIN IN COMPLEX WITH A H3K4ME3 PEPTIDE
Descriptor:H3K4me3 peptide, Transcription initiation factor TFIID subunit 3, ZINC ION
Authors:van Ingen, H., van Schaik, F.M.A., Wienk, H., Timmers, M., Boelens, R.
Deposit date:2008-02-22
Release date:2008-07-15
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Recognition of the H3K4me3 mark by the TAF3-PHD finger
To be Published
1PM6
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SOLUTION STRUCTURE OF FULL-LENGTH EXCISIONASE (XIS) FROM BACTERIOPHAGE HK022
Descriptor:Excisionase
Authors:Rogov, V.V., Luecke, C., Muresanu, L., Wienk, H., Kleinhaus, I., Werner, K., Loehr, F., Pristovsek, P., Rueterjans, H.
Deposit date:2003-06-10
Release date:2003-12-30
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution structure and stability of the full-length excisionase from bacteriophage HK022.
Eur.J.Biochem., 270, 2003
1QXN
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SOLUTION STRUCTURE OF THE 30 KDA POLYSULFIDE-SULFUR TRANSFERASE HOMODIMER FROM WOLINELLA SUCCINOGENES
Descriptor:sulfide dehydrogenase, PENTASULFIDE-SULFUR
Authors:Lin, Y.J., Dancea, F., Loehr, F., Klimmek, O., Pfeiffer-Marek, S., Nilges, M., Wienk, H., Kroeger, A., Rueterjans, H.
Deposit date:2003-09-08
Release date:2004-02-24
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Solution Structure of the 30 kDa Polysulfide-Sulfur Transferase Homodimer from Wolinella succinogenes
Biochemistry, 43, 2004
2JVF
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SOLUTION STRUCTURE OF M7, A COMPUTATIONALLY-DESIGNED ARTIFICIAL PROTEIN
Descriptor:de novo protein M7
Authors:Stordeur, C., Dalluege, R., Birkenmeier, O., Wienk, H., Rudolph, R., Lange, C., Luecke, C.
Deposit date:2007-09-19
Release date:2008-08-12
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:The NMR solution structure of the artificial protein M7 matches the computationally designed model
Proteins, 72, 2008
2K4D
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E2-C-CBL RECOGNITION IS NECESSARY BUT NOT SUFFICIENT FOR UBIQUITINATION ACTIVITY
Descriptor:E3 ubiquitin-protein ligase CBL, ZINC ION
Authors:Huang, A., De Jong, R.N., Wienk, H., Winkler, S.G., Timmers, H.T.M., Boelens, R.
Deposit date:2008-06-06
Release date:2009-01-20
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:E2-c-Cbl recognition is necessary but not sufficient for ubiquitination activity
J.Mol.Biol., 385, 2009
2KEI
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REFINED SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O1
Descriptor:Lactose operon repressor, DNA (5'-D(*GP*AP*AP*TP*TP*GP*TP*GP*AP*GP*CP*GP*GP*AP*TP*AP*AP*CP*AP*AP*TP*TP*T)-3'), DNA (5'-D(P*AP*AP*AP*TP*TP*GP*TP*TP*AP*TP*CP*CP*GP*CP*TP*CP*AP*CP*AP*AP*TP*TP*C)-3')
Authors:Romanuka, J., Folkers, G., Biris, N., Tishchenko, E., Wienk, H., Kaptein, R., Boelens, R.
Deposit date:2009-01-30
Release date:2009-05-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
2KEJ
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SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O2
Descriptor:Lactose operon repressor, DNA (5'-D(*GP*AP*AP*AP*TP*GP*TP*GP*AP*GP*CP*GP*AP*GP*TP*AP*AP*CP*AP*AP*CP*CP*G)-3'), DNA (5'-D(P*CP*GP*GP*TP*TP*GP*TP*TP*AP*CP*TP*CP*GP*CP*TP*CP*AP*CP*AP*TP*TP*TP*C)-3')
Authors:Romanuka, J., Folkers, G., Biris, N., Tishchenko, E., Wienk, H., Kaptein, R., Boelens, R.
Deposit date:2009-01-30
Release date:2009-05-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
2KEK
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SOLUTION STRUCTURE OF A DIMER OF LAC REPRESSOR DNA-BINDING DOMAIN COMPLEXED TO ITS NATURAL OPERATOR O3
Descriptor:Lactose operon repressor, DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*GP*AP*GP*CP*GP*CP*AP*AP*CP*GP*CP*AP*AP*TP*TP*C)-3'), DNA (5'-D(P*GP*AP*AP*TP*TP*GP*CP*GP*TP*TP*GP*CP*GP*CP*TP*CP*AP*CP*TP*GP*CP*CP*G)-3')
Authors:Romanuka, J., Folkers, G., Biris, N., Tishchenko, E., Wienk, H., Kaptein, R., Boelens, R.
Deposit date:2009-01-30
Release date:2009-05-19
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Specificity and affinity of Lac repressor for the auxiliary operators O2 and O3 are explained by the structures of their protein-DNA complexes.
J.Mol.Biol., 390, 2009
2L0T
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SOLUTION STRUCTURE OF THE COMPLEX OF UBIQUITIN AND THE VHS DOMAIN OF STAM2
Descriptor:Ubiquitin, Signal transducing adapter molecule 2
Authors:Lange, A., Hoeller, D., Wienk, H., Marcillat, O., Lancelin, J., Walker, O.
Deposit date:2010-07-15
Release date:2010-12-15
Last modified:2012-03-14
Method:SOLUTION NMR
Cite:NMR reveals a different mode of binding of the Stam2 VHS domain to ubiquitin and diubiquitin.
Biochemistry, 50, 2011
2LRD
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THE SOLUTION STRUCTURE OF THE MONOMERIC ACANTHAPORIN
Descriptor:Acanthaporin
Authors:Michalek, M., Soennichsen, F.D., Wechselberger, R., Dingley, A.J., Wienk, H., Simanski, M., Herbst, R., Lorenzen, I., Marciano-Cabral, F., Gelhaus, C., Groetzinger, J., Leippe, M.
Deposit date:2012-03-28
Release date:2012-05-02
Last modified:2012-12-26
Method:SOLUTION NMR
Cite:Structure and function of a unique pore-forming protein from a pathogenic acanthamoeba.
Nat.Chem.Biol., 9, 2013
2LRE
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THE SOLUTION STRUCTURE OF THE DIMERIC ACANTHAPORIN
Descriptor:Acanthaporin
Authors:Michalek, M., Soennichsen, F.D., Wechselberger, R., Dingley, A.J., Wienk, H., Simanski, M., Herbst, R., Lorenzen, I., Marciano-Cabral, F., Gelhaus, C., Groetzinger, J., Leippe, M.
Deposit date:2012-03-28
Release date:2012-05-02
Last modified:2012-12-26
Method:SOLUTION NMR
Cite:Structure and function of a unique pore-forming protein from a pathogenic acanthamoeba.
Nat.Chem.Biol., 9, 2013
2MUT
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SOLUTION STRUCTURE OF THE F231L MUTANT ERCC1-XPF DIMERIZATION REGION
Descriptor:DNA excision repair protein ERCC-1, DNA repair endonuclease XPF
Authors:Faridounnia, M., Wienk, H., Kovacic, L., Folkers, G.E., Jaspers, N.G.J., Kaptein, R., Hoeijmakers, J.H.J., Boelens, R.
Deposit date:2014-09-17
Release date:2015-06-24
Last modified:2015-08-26
Method:SOLUTION NMR
Cite:The Cerebro-oculo-facio-skeletal Syndrome Point Mutation F231L in the ERCC1 DNA Repair Protein Causes Dissociation of the ERCC1-XPF Complex.
J.Biol.Chem., 290, 2015
2N01
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NMR STRUCTURE OF VIRB9 C-TERMINAL DOMAIN IN COMPLEX WITH VIRB7 N-TERMINAL DOMAIN FROM XANTHOMONAS CITRI'S T4SS
Descriptor:VirB7 protein, VirB9 protein
Authors:Oliveira, L.C., Souza, D.P., Salinas, R.K., Wienk, H., Boelens, R., Farah, S.C.
Deposit date:2015-03-03
Release date:2015-09-09
Last modified:2016-10-19
Method:SOLUTION NMR
Cite:VirB7 and VirB9 Interactions Are Required for the Assembly and Antibacterial Activity of a Type IV Secretion System.
Structure, 24, 2016
2NBG
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STRUCTURE OF THE GEOBACILLUS STEAROTHERMOPHILUS IF2 G3-SUBDOMAIN
Descriptor:Translation initiation factor IF-2
Authors:Dongre, R., Folkers, G.E., Gualerzi, C.O., Boelens, R., Wienk, H.
Deposit date:2016-02-11
Release date:2016-07-20
Last modified:2016-09-07
Method:SOLUTION NMR
Cite:A model for the interaction of the G3-subdomain of Geobacillus stearothermophilus IF2 with the 30S ribosomal subunit.
Protein Sci., 25, 2016
4B41
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CRYSTAL STRUCTURE OF AN AMYLOID-BETA BINDING SINGLE CHAIN ANTIBODY G7
Descriptor:ANTIBODY G7, CHLORIDE ION, GLYCEROL
Authors:Beringer, D.X., Dorresteijn, B., Rutten, L., Wienk, H., el Khattabi, M., Kroon-Batenburg, L.M.J., Verrips, C.T.
Deposit date:2012-07-27
Release date:2013-08-07
Method:X-RAY DIFFRACTION (1.191 Å)
Cite:Crystal Structure of an Amyloid-Beta Binding Single Chain Antibody G7
To be Published
4B5E
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CRYSTAL STRUCTURE OF AN AMYLOID-BETA BINDING SINGLE CHAIN ANTIBODY PS2-8
Descriptor:PS2-8, SULFATE ION, GLYCEROL
Authors:Beringer, D.X., Dorresteijn, B., Rutten, L., Wienk, H., el Khattabi, M., Kroon-Batenburg, L.M.J., Verrips, C.T.
Deposit date:2012-08-03
Release date:2013-08-21
Last modified:2017-04-19
Method:X-RAY DIFFRACTION (1.936 Å)
Cite:Amyloid-Beta Binding Single Chain Antibody Ps2-8
To be Published
3KGR
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CRYSTAL STRUCTURE OF THE HUMAN LEUKOCYTE-ASSOCIATED IG-LIKE RECEPTOR-1 (LAIR-1)
Descriptor:Leukocyte-associated immunoglobulin-like receptor 1, GLYCINE, GLYCEROL
Authors:Brondijk, T.H.C., Huizinga, E.G., Ballering, J.
Deposit date:2009-10-29
Release date:2009-12-22
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure and collagen-binding site of immune inhibitory receptor LAIR-1: unexpected implications for collagen binding by platelet receptor GPVI
Blood, 115, 2010
3QZU
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CRYSTAL STRUCTURE OF BACILLUS SUBTILIS LIPASE A 7-FOLD MUTANT; THE OUTCOME OF DIRECTED EVOLUTION TOWARDS THERMOSTABILITY
Descriptor:Lipase estA, CHLORIDE ION, SULFATE ION, ...
Authors:Pijning, T., Augustyniak, W., Reetz, M.T., Dijkstra, B.W.
Deposit date:2011-03-07
Release date:2012-02-08
Last modified:2012-04-18
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biophysical characterization of mutants of Bacillus subtilis lipase evolved for thermostability: Factors contributing to increased activity retention.
Protein Sci., 21, 2012
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