Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1CLP
DownloadVisualize
BU of 1clp by Molmil
CRYSTAL STRUCTURE OF A CALCIUM-INDEPENDENT PHOSPHOLIPASELIKE MYOTOXIC PROTEIN FROM BOTHROPS ASPER VENOM
Descriptor: MYOTOXIN II
Authors:Arni, R.K, Ward, R.J, Gutierrez, J.M, Tulinsky, A.
Deposit date:1994-09-12
Release date:1994-11-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a calcium-independent phospholipase-like myotoxic protein from Bothrops asper venom.
Acta Crystallogr.,Sect.D, 51, 1995
1XXS
DownloadVisualize
BU of 1xxs by Molmil
Structural insights for fatty acid binding in a Lys49 phospholipase A2: crystal structure of myotoxin II from Bothrops moojeni complexed with stearic acid
Descriptor: Phospholipase A2 homolog 2, STEARIC ACID, SULFATE ION
Authors:Watanabe, L, Soares, A.M, Ward, R.J, Fontes, M.R, Arni, R.K.
Deposit date:2004-11-08
Release date:2005-03-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights for fatty acid binding in a Lys49-phospholipase A(2): crystal structure of myotoxin II from Bothrops moojeni complexed with stearic acid
Biochimie, 87, 2005
1B2M
DownloadVisualize
BU of 1b2m by Molmil
THREE-DIMENSIONAL STRUCTURE OF RIBONULCEASE T1 COMPLEXED WITH AN ISOSTERIC PHOSPHONATE ANALOGUE OF GPU: ALTERNATE SUBSTRATE BINDING MODES AND CATALYSIS.
Descriptor: 5'-R(*GP*(U34))-3', RIBONUCLEASE T1
Authors:Arni, R.K, Watanabe, L, Ward, R.J, Kreitman, R.J, Kumar, K, Walz Jr, F.G.
Deposit date:1998-11-27
Release date:1999-03-25
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structure of ribonuclease T1 complexed with an isosteric phosphonate substrate analogue of GpU: alternate substrate binding modes and catalysis.
Biochemistry, 38, 1999
1XXN
DownloadVisualize
BU of 1xxn by Molmil
Crystal structure of a mesophilic xylanase A from Bacillus subtilis 1A1
Descriptor: Endo-1,4-beta-xylanase A, S,R MESO-TARTARIC ACID
Authors:Murakami, M.T, Ruller, R, Ward, R.J, Arni, R.K.
Deposit date:2004-11-07
Release date:2005-10-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Correlation of temperature induced conformation change with optimum catalytic activity in the recombinant G/11 xylanase A from Bacillus subtilis strain 168 (1A1).
Febs Lett., 579, 2005
1GOD
DownloadVisualize
BU of 1god by Molmil
MONOMERIC LYS-49 PHOSPHOLIPASE A2 HOMOLOGUE ISOLATED FROM THE VENOM OF CERROPHIDION (BOTHROPS) GODMANI
Descriptor: PROTEIN (PHOSPHOLIPASE A2)
Authors:Arni, R.K, Fontes, M.R.M, Barberato, C, Gutierrez, J.M, Diaz-Oreiro, C, Ward, R.J.
Deposit date:1999-04-16
Release date:1999-04-23
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of myotoxin II, a monomeric Lys49-phospholipase A2 homologue isolated from the venom of Cerrophidion (Bothrops) godmani.
Arch.Biochem.Biophys., 366, 1999
5K9Y
DownloadVisualize
BU of 5k9y by Molmil
Crystal structure of a thermophilic xylanase A from Bacillus subtilis 1A1 quadruple mutant Q7H/G13R/S22P/S179C
Descriptor: Endo-1,4-beta-xylanase A
Authors:Pinheiro, M.P, Ferreira, T.L, Silva, S.R.B, Fuzo, C.A, Silva, S.R, Lourenzoni, M.R, Vieira, D.S, Ward, R.J, Nonato, M.C.
Deposit date:2016-06-01
Release date:2017-04-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The role of local residue environmental changes in thermostable mutants of the GH11 xylanase from Bacillus subtilis.
Int. J. Biol. Macromol., 97, 2017
3NGS
DownloadVisualize
BU of 3ngs by Molmil
Structure of Leishmania nucleoside diphosphate kinase b with ordered nucleotide-binding loop
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, Nucleoside diphosphate kinase, PHOSPHATE ION
Authors:Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T.
Deposit date:2010-06-13
Release date:2011-04-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
3NGT
DownloadVisualize
BU of 3ngt by Molmil
Structure of Leishmania NDKb complexed with AMP.
Descriptor: ADENOSINE MONOPHOSPHATE, Nucleoside diphosphate kinase
Authors:Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T.
Deposit date:2010-06-13
Release date:2011-04-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
3NGU
DownloadVisualize
BU of 3ngu by Molmil
Structure of Leishmania NDKb complexed with ADP.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Nucleoside diphosphate kinase
Authors:Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T.
Deposit date:2010-06-13
Release date:2011-04-27
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
3NGR
DownloadVisualize
BU of 3ngr by Molmil
Crystal structure of Leishmania nucleoside diphosphate kinase b with unordered nucleotide-binding loop.
Descriptor: Nucleoside diphosphate kinase, PHOSPHATE ION
Authors:Trindade, D.M, Sousa, T.A.C.B, Tonoli, C.C.C, Santos, C.R, Arni, R.K, Ward, R.J, Oliveira, A.H.C, Murakami, M.T.
Deposit date:2010-06-13
Release date:2011-04-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
3PZU
DownloadVisualize
BU of 3pzu by Molmil
P212121 crystal form of the endo-1,4-beta-glucanase from Bacillus subtilis 168
Descriptor: Endoglucanase, GLYCEROL
Authors:Santos, C.R, Paiva, J.H, Akao, P.K, Meza, A.N, Silva, J.C, Squina, F.M, Ward, R.J, Ruller, R, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-09-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
3PZT
DownloadVisualize
BU of 3pzt by Molmil
Structure of the endo-1,4-beta-glucanase from Bacillus subtilis 168 with manganese(II) ion
Descriptor: Endoglucanase, GLYCEROL, MANGANESE (II) ION, ...
Authors:Santos, C.R, Paiva, J.H, Akao, P.K, Meza, A.N, Silva, J.C, Squina, F.M, Ward, R.J, Ruller, R, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-09-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
3PZV
DownloadVisualize
BU of 3pzv by Molmil
C2 crystal form of the endo-1,4-beta-glucanase from Bacillus subtilis 168
Descriptor: Endoglucanase
Authors:Santos, C.R, Paiva, J.H, Akao, P.K, Meza, A.N, Silva, J.C, Squina, F.M, Ward, R.J, Ruller, R, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-09-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.867 Å)
Cite:Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
4MDO
DownloadVisualize
BU of 4mdo by Molmil
Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-glucosidase, DI(HYDROXYETHYL)ETHER, ...
Authors:Giuseppe, P.O, Souza, T.A.C.B, Souza, F.H.M, Zanphorlin, L.M, Machado, C.B, Ward, R.J, Jorge, J.A, Furriel, R.P.M, Murakami, M.T.
Deposit date:2013-08-23
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for glucose tolerance in GH1 beta-glucosidases.
Acta Crystallogr.,Sect.D, 70, 2014
4MDP
DownloadVisualize
BU of 4mdp by Molmil
Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens in complex with glucose
Descriptor: Beta-glucosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Giuseppe, P.O, Souza, T.A.C.B, Souza, F.H.M, Zanphorlin, L.M, Machado, C.B, Ward, R.J, Jorge, J.A, Furriel, R.P.M, Murakami, M.T.
Deposit date:2013-08-23
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for glucose tolerance in GH1 beta-glucosidases.
Acta Crystallogr.,Sect.D, 70, 2014
4NPR
DownloadVisualize
BU of 4npr by Molmil
Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus
Descriptor: SULFATE ION, Xyloglucan-specific endo-beta-1,4-glucanase GH12
Authors:Cordeiro, R.L, Santos, C.R, Furtado, G.P, Damasio, A.R.L, Polizeli, M.L.T.M, Ward, R.J, Murakami, M.T.
Deposit date:2013-11-22
Release date:2014-12-24
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of the Family 12 Xyloglucanase from Aspergillus niveus
To be Published
2L8A
DownloadVisualize
BU of 2l8a by Molmil
Structure of a novel CBM3 lacking the calcium-binding site
Descriptor: Endoglucanase
Authors:Paiva, J.H, Meza, A.N, Sforca, M.L, Navarro, R.Z, Neves, J.L, Santos, C.R, Murakami, M.T, Zeri, A.C.
Deposit date:2011-01-07
Release date:2011-12-21
Last modified:2011-12-28
Method:SOLUTION NMR
Cite:Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
1S8G
DownloadVisualize
BU of 1s8g by Molmil
Crystal structure of Lys49-Phospholipase A2 from Agkistrodon contortrix laticinctus, fatty acid bound form
Descriptor: GLYCEROL, LAURIC ACID, Phospholipase A2 homolog, ...
Authors:Ambrosio, A.L.B, de Souza, D.H.F, Nonato, M.C, Selistre de Araujo, H.S, Ownby, C.L, Garratt, R.C.
Deposit date:2004-02-02
Release date:2004-02-10
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A Molecular Mechanism for Lys49-Phospholipase A2 Activity Based on Ligand-induced Conformational Change.
J.Biol.Chem., 280, 2005
1S8I
DownloadVisualize
BU of 1s8i by Molmil
Crystal structure of Lys49-Phospholipase A2 from Agkistrodon contortrix laticinctus, second fatty acid free form
Descriptor: Phospholipase A2 homolog, SULFATE ION
Authors:Ambrosio, A.L.B, de Souza, D.H.F, Nonato, M.C, Selistre de Araujo, H.S, Ownby, C.L, Garratt, R.C.
Deposit date:2004-02-02
Release date:2004-02-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.609 Å)
Cite:A Molecular Mechanism for Lys49-Phospholipase A2 Activity Based on Ligand-induced Conformational Change.
J.Biol.Chem., 280, 2005
1S8H
DownloadVisualize
BU of 1s8h by Molmil
Crystal structure of Lys49-Phospholipase A2 from Agkistrodon contortrix laticinctus, first fatty acid free form
Descriptor: Phospholipase A2 homolog, SULFATE ION
Authors:Ambrosio, A.L.B, de Souza, D.H.F, Nonato, M.C, Selistre de Araujo, H.S, Ownby, C.L, Garratt, R.C.
Deposit date:2004-02-02
Release date:2004-02-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Molecular Mechanism for Lys49-Phospholipase A2 Activity Based on Ligand-induced Conformational Change.
J.Biol.Chem., 280, 2005
3PRV
DownloadVisualize
BU of 3prv by Molmil
Nucleoside diphosphate kinase B from Trypanosoma cruzi
Descriptor: Nucleoside diphosphate kinase
Authors:Souza, T.A.C.B, Trindade, D.M, Tonoli, C.C.C, Santos, C.R, Oliveira, A.H.C, Murakami, M.T.
Deposit date:2010-11-30
Release date:2011-05-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Molecular adaptability of nucleoside diphosphate kinase b from trypanosomatid parasites: stability, oligomerization and structural determinants of nucleotide binding.
Mol Biosyst, 7, 2011
1AJP
DownloadVisualize
BU of 1ajp by Molmil
PENICILLIN ACYLASE COMPLEXED WITH 2,5-DIHYDROXYPHENYLACETIC ACID
Descriptor: 2-(3,6-DIHYDROXYPHENYL)ACETIC ACID, CALCIUM ION, PENICILLIN AMIDOHYDROLASE
Authors:Done, S.H.
Deposit date:1997-05-07
Release date:1997-11-12
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Ligand-induced conformational change in penicillin acylase.
J.Mol.Biol., 284, 1998
1AI7
DownloadVisualize
BU of 1ai7 by Molmil
PENICILLIN ACYLASE COMPLEXED WITH PHENOL
Descriptor: CALCIUM ION, PENICILLIN AMIDOHYDROLASE, PHENOL
Authors:Done, S.H.
Deposit date:1997-05-01
Release date:1997-11-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Ligand-induced conformational change in penicillin acylase.
J.Mol.Biol., 284, 1998
1AI4
DownloadVisualize
BU of 1ai4 by Molmil
PENICILLIN ACYLASE COMPLEXED WITH 3,4-DIHYDROXYPHENYLACETIC ACID
Descriptor: 2-(3,4-DIHYDROXYPHENYL)ACETIC ACID, CALCIUM ION, PENICILLIN AMIDOHYDROLASE
Authors:Done, S.H.
Deposit date:1997-05-01
Release date:1997-11-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Ligand-induced conformational change in penicillin acylase.
J.Mol.Biol., 284, 1998
1AI5
DownloadVisualize
BU of 1ai5 by Molmil
PENICILLIN ACYLASE COMPLEXED WITH M-NITROPHENYLACETIC ACID
Descriptor: 2-(3-NITROPHENYL)ACETIC ACID, CALCIUM ION, PENICILLIN AMIDOHYDROLASE
Authors:Done, S.H.
Deposit date:1997-05-01
Release date:1997-11-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Ligand-induced conformational change in penicillin acylase.
J.Mol.Biol., 284, 1998

 

12>

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon