Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1ESG
DownloadVisualize
BU of 1esg by Molmil
RESTRICTION ENDONUCLEASE BAMHI BOUND TO A NON-SPECIFIC DNA.
Descriptor: DNA (5'-D(*TP*GP*AP*AP*TP*CP*CP*A)-3'), DNA (5'-D(*TP*GP*GP*AP*TP*TP*CP*A)-3'), TYPE II RESTRICTION ENZYME BAMHI
Authors:Viadiu, H, Aggarwal, A.K.
Deposit date:2000-04-09
Release date:2000-05-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of BamHI bound to nonspecific DNA: a model for DNA sliding.
Mol.Cell, 5, 2000
3BAM
DownloadVisualize
BU of 3bam by Molmil
RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND MANGANESE IONS (POST-REACTIVE COMPLEX)
Descriptor: DNA (5'-D(*TP*AP*TP*G)-3'), DNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3'), DNA (5'-D(P*GP*AP*TP*CP*CP*AP*TP*A)-3'), ...
Authors:Viadiu, H, Aggarwal, A.K.
Deposit date:1998-08-19
Release date:1999-01-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The role of metals in catalysis by the restriction endonuclease BamHI.
Nat.Struct.Biol., 5, 1998
2BAM
DownloadVisualize
BU of 2bam by Molmil
RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND CALCIUM IONS (PRE-REACTIVE COMPLEX).
Descriptor: CALCIUM ION, DNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3'), PROTEIN (ENDONUCLEASE BAMHI)
Authors:Viadiu, H, Aggarwal, A.K.
Deposit date:1998-08-19
Release date:1999-10-31
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:The role of metals in catalysis by the restriction endonuclease BamHI.
Nat.Struct.Biol., 5, 1998
7EZJ
DownloadVisualize
BU of 7ezj by Molmil
Crystal structure of p73 DNA binding domain complex bound with 1 bp and 2 bp spacer DNA response elements.
Descriptor: 12-mer DNA, Tumor protein p73, ZINC ION
Authors:Koley, T, Roy Chowdhury, S, Kumar, M, Kaur, P, Singh, T.P, Viadiu, H, Ethayathulla, A.S.
Deposit date:2021-06-01
Release date:2022-04-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Deciphering the mechanism of p73 recognition of p53 response elements using the crystal structure of p73-DNA complexes and computational studies.
Int.J.Biol.Macromol., 206, 2022
2EZV
DownloadVisualize
BU of 2ezv by Molmil
Crystal structure of tetrameric restriction endonuclease SfiI bound to cognate DNA.
Descriptor: 5'-D(*AP*GP*GP*CP*CP*TP*TP*GP*TP*TP*GP*GP*CP*CP*A)-3', 5'-D(*TP*GP*GP*CP*CP*AP*AP*CP*AP*AP*GP*GP*CP*CP*T)-3', CALCIUM ION, ...
Authors:Aggarwal, A.K, Vanamee, E.S, Viadiu, H.
Deposit date:2005-11-10
Release date:2006-01-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A view of consecutive binding events from structures of tetrameric endonuclease SfiI bound to DNA
Embo J., 24, 2005
4G82
DownloadVisualize
BU of 4g82 by Molmil
Crystal Structure of p73 DNA-Binding Domain Tetramer bound to a Full Response-Element
Descriptor: DNA (5'-D(P*GP*AP*AP*CP*AP*TP*GP*TP*TP*C)-3'), Tumor protein p73, ZINC ION
Authors:Ethayathulla, A.S, Viadiu, H.
Deposit date:2012-07-20
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal Structure of p73 DNA-Binding Domain Tetramer bound to a Full Response-Element
J.Biol.Chem., 2013
4G83
DownloadVisualize
BU of 4g83 by Molmil
Crystal Structure of p73 DNA-Binding Domain Tetramer bound to a Full Response-Element
Descriptor: Tumor protein p73, ZINC ION, dna
Authors:Ethayathulla, A.S, Viadiu, H.
Deposit date:2012-07-20
Release date:2013-01-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (4 Å)
Cite:Crystal Structure of p73 DNA-Binding Domain Tetramer bound to a Full Response-Element
J.Biol.Chem., 2013
4GUO
DownloadVisualize
BU of 4guo by Molmil
structure of p73 DNA binding domain complex with 12 bp DNA
Descriptor: DNA (5'-D(*CP*GP*GP*GP*CP*AP*AP*GP*CP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*GP*CP*TP*TP*GP*CP*CP*CP*G)-3'), Tumor protein p73, ...
Authors:Ethayathulla, A.S, Viadiu, H.
Deposit date:2012-08-29
Release date:2013-11-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.19 Å)
Cite:structure of p73 DNA binding domain complex with 12 bp DNA
To be Published
4GUQ
DownloadVisualize
BU of 4guq by Molmil
Structure of mutS139F p73 DNA binding domain complexed with 20BP DNA response element
Descriptor: DNA (5'-D(P*GP*AP*AP*CP*AP*TP*GP*TP*TP*C)-3'), Tumor protein p73, ZINC ION
Authors:Ethayathulla, A.S, Nguyen, H.T, Viadiu, H.
Deposit date:2012-08-29
Release date:2013-08-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Transactivation specificity is conserved among p53 family proteins and depends on a response element sequence code.
Nucleic Acids Res., 41, 2013
3VD0
DownloadVisualize
BU of 3vd0 by Molmil
structure of p73 DNA binding domain tetramer modulates p73 transactivation
Descriptor: DNA (5'-D(*CP*AP*GP*GP*CP*AP*TP*GP*CP*CP*TP*G)-3'), Tumor protein p73, ZINC ION
Authors:Ethayathulla, A.S, Tse, P.W, Nguyen, S, Viadiu, H.
Deposit date:2012-01-04
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of p73 DNA-binding domain tetramer modulates p73 transactivation.
Proc.Natl.Acad.Sci.USA, 109, 2012
3VD1
DownloadVisualize
BU of 3vd1 by Molmil
structure of p73 DNA binding domain tetramer modulates p73 transactivation
Descriptor: DNA (5'-D(*CP*GP*GP*GP*CP*AP*TP*GP*CP*CP*CP*G)-3'), Tumor protein p73, ZINC ION
Authors:Ethayathulla, A.S, Tse, P.W, Nguyen, S, Viadiu, H.
Deposit date:2012-01-04
Release date:2012-04-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of p73 DNA-binding domain tetramer modulates p73 transactivation.
Proc.Natl.Acad.Sci.USA, 109, 2012
3VD2
DownloadVisualize
BU of 3vd2 by Molmil
structure of p73 DNA binding domain tetramer modulates p73 transactivation
Descriptor: DNA (5'-D(*AP*TP*GP*GP*AP*CP*AP*TP*GP*TP*CP*CP*AP*T)-3'), Tumor protein p73, ZINC ION
Authors:Ethayathulla, A.S, Tse, P.W, Nguyen, S, Viadiu, H.
Deposit date:2012-01-04
Release date:2012-04-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structure of p73 DNA-binding domain tetramer modulates p73 transactivation.
Proc.Natl.Acad.Sci.USA, 109, 2012
2F03
DownloadVisualize
BU of 2f03 by Molmil
Crystal structure of tetrameric restriction endonuclease SfiI in complex with cognate DNA (partial bound form)
Descriptor: CALCIUM ION, DNA (5'-D(*AP*AP*TP*AP*GP*GP*CP*CP*TP*TP*GP*TP*TP*GP*GP*CP*CP*AP*CP*AP*T)-3'), DNA (5'-D(*AP*TP*G*TP*GP*GP*CP*CP*AP*AP*CP*AP*AP*GP*GP*CP*CP*TP*AP*TP*T)-3'), ...
Authors:Aggarwal, A.K, Vanamee, E.S, Viadiu, H
Deposit date:2005-11-11
Release date:2007-01-16
Last modified:2015-09-09
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:A view of consecutive binding events from structures of tetrameric endonuclease SfiI bound to DNA.
Embo J., 24, 2005
3ODH
DownloadVisualize
BU of 3odh by Molmil
Structure of OkrAI/DNA complex
Descriptor: CALCIUM ION, DNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3'), OkrAI endonuclease
Authors:Vanamee, E.S, Aggarwal, A.K.
Deposit date:2010-08-11
Release date:2010-10-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Asymmetric DNA recognition by the OkrAI endonuclease, an isoschizomer of BamHI.
Nucleic Acids Res., 39, 2011

218500

PDB entries from 2024-04-17

PDB statisticsPDBj update infoContact PDBjnumon