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1JNJ
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BU of 1jnj by Molmil
NMR solution structure of the human beta2-microglobulin
Descriptor: beta2-microglobulin
Authors:Verdone, G, Corazza, A, Viglino, P, Pettirossi, F, Giorgetti, S, Mangione, P, Andreola, A, Stoppini, M, Bellotti, V, Esposito, G.
Deposit date:2001-07-24
Release date:2002-02-27
Last modified:2022-02-23
Method:SOLUTION NMR
Cite:The solution structure of human beta2-microglobulin reveals the prodromes of its amyloid transition.
Protein Sci., 11, 2002
2OII
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BU of 2oii by Molmil
Structure of EMILIN-1 C1q-like domain
Descriptor: EMILIN-1
Authors:Verdone, G, Colebrooke, S.A, Corazza, A, Cicero, D.O, Eliseo, T, Viglino, P, Campbell, I.D, Colombatti, A, Esposito, G.
Deposit date:2007-01-11
Release date:2008-01-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The solution structure of the C-terminal domain of EMILIN-1
To be Published
2KA3
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BU of 2ka3 by Molmil
Structure of EMILIN-1 C1Q-like domain
Descriptor: EMILIN-1
Authors:Verdone, G, Corazza, A, Colebrooke, S.A, Cicero, D.O, Eliseo, T, Boyd, J, Doliana, R, Fogolari, F, Viglino, P, Colombatti, A, Campbell, I.D, Esposito, G.
Deposit date:2008-10-30
Release date:2008-11-25
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:NMR-based homology model for the solution structure of the C-terminal globular domain of EMILIN1
J.Biomol.Nmr, 43, 2009
3V8G
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BU of 3v8g by Molmil
Crystal structure of an asymmetric trimer of a glutamate transporter homologue (GltPh)
Descriptor: ASPARTIC ACID, SODIUM ION, sodium-coupled L-aspartate transporter
Authors:Verdon, G, Boudker, O.
Deposit date:2011-12-22
Release date:2012-02-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.66 Å)
Cite:Crystal structure of an asymmetric trimer of a bacterial glutamate transporter homolog.
Nat.Struct.Mol.Biol., 19, 2012
3V8F
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BU of 3v8f by Molmil
Crystal structure of crosslinked GltPh V216C-M385C mutant
Descriptor: ASPARTIC ACID, MERCURY (II) ION, SODIUM ION, ...
Authors:Verdon, G, Boudker, O.
Deposit date:2011-12-22
Release date:2012-02-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Crystal structure of an asymmetric trimer of a bacterial glutamate transporter homolog.
Nat.Struct.Mol.Biol., 19, 2012
1OXT
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BU of 1oxt by Molmil
Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
Descriptor: ABC transporter, ATP binding protein
Authors:Verdon, G, Albers, S.V, Dijkstra, B.W, Driessen, A.J, Thunnissen, A.M.
Deposit date:2003-04-03
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the ATPase subunit of the glucose ABC transporter from Sulfolobus solfataricus: nucleotide-free and nucleotide-bound conformations
J.Mol.Biol., 330, 2003
1OXS
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BU of 1oxs by Molmil
Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
Descriptor: ABC transporter, ATP binding protein, IODIDE ION
Authors:Verdon, G, Albers, S.V, Dijkstra, B.W, Driessen, A.J, Thunnissen, A.M.
Deposit date:2003-04-03
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of the ATPase subunit of the glucose ABC transporter from Sulfolobus solfataricus: nucleotide-free and nucleotide-bound conformations
J.Mol.Biol., 330, 2003
1OXU
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BU of 1oxu by Molmil
Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
Descriptor: ABC transporter, ATP binding protein, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Verdon, G, Albers, S.V, Dijkstra, B.W, Driessen, A.J, Thunnissen, A.M.
Deposit date:2003-04-03
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of the ATPase subunit of the glucose ABC transporter from Sulfolobus solfataricus: nucleotide-free and nucleotide-bound conformations
J.Mol.Biol., 330, 2003
1OXV
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BU of 1oxv by Molmil
Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
Descriptor: ABC transporter, ATP binding protein, IODIDE ION, ...
Authors:Verdon, G, Albers, S.V, Dijkstra, B.W, Driessen, A.J, Thunnissen, A.M.
Deposit date:2003-04-03
Release date:2003-06-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structures of the ATPase subunit of the glucose ABC transporter from Sulfolobus solfataricus: nucleotide-free and nucleotide-bound conformations
J.Mol.Biol., 330, 2003
1OXX
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BU of 1oxx by Molmil
Crystal structure of GlcV, the ABC-ATPase of the glucose ABC transporter from Sulfolobus solfataricus
Descriptor: ABC transporter, ATP binding protein, IODIDE ION
Authors:Verdon, G, Albers, S.-V, van Oosterwijk, N, Dijkstra, B.W, Driessen, A.J.M, Thunnissen, A.M.W.H.
Deposit date:2003-04-03
Release date:2003-09-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Formation of the productive ATP-Mg2+-bound dimer of GlcV, an ABC-ATPase from Sulfolobus solfataricus
J.Mol.Biol., 334, 2003
4P1A
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BU of 4p1a by Molmil
Thallium-bound inward-facing state of the glutamate transporter homologue GltPh
Descriptor: GltPh, MERCURY (II) ION, THALLIUM (I) ION
Authors:Verdon, G, Boudker, O.
Deposit date:2014-02-25
Release date:2014-06-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.75 Å)
Cite:Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
Elife, 3, 2014
4P19
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BU of 4p19 by Molmil
Closed, apo inward-facing state of the glutamate transporter homologue GltPh
Descriptor: 425aa long hypothetical proton glutamate symport protein, MERCURY (II) ION
Authors:Verdon, G, Boudker, O.
Deposit date:2014-02-25
Release date:2014-06-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
Elife, 3, 2014
4P3J
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BU of 4p3j by Molmil
Apo inward-facing state of the glutamate transporter homologue GltPh in alkali-free conditions
Descriptor: GltPh, MERCURY (II) ION
Authors:Verdon, G, Boudker, O.
Deposit date:2014-03-08
Release date:2014-06-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
Elife, 3, 2014
4P6H
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BU of 4p6h by Molmil
Tl+-bound inward-facing state (bound conformation) of the glutamate transporter homologue GltPh
Descriptor: GltPh, MERCURY (II) ION, THALLIUM (I) ION
Authors:Verdon, G, Boudker, O.
Deposit date:2014-03-24
Release date:2014-06-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4.08 Å)
Cite:Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
Elife, 3, 2014
7ARO
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BU of 7aro by Molmil
Crystal structure of the non-ribose partial agonist LUF5833 bound to the adenosine A2A receptor
Descriptor: 2-azanyl-6-(1~{H}-imidazol-2-ylmethylsulfanyl)-4-phenyl-pyridine-3,5-dicarbonitrile, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, CHOLESTEROL, ...
Authors:Verdon, G, Amelia, T, van Veldhoven, J, Falsini, M, Liu, R, Heitman, L, van Westen, G, Segala, E, Cheng, R, Cooke, R, van der Es, D, Ijzerman, A.
Deposit date:2020-10-25
Release date:2021-04-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.119 Å)
Cite:Crystal Structure and Subsequent Ligand Design of a Nonriboside Partial Agonist Bound to the Adenosine A 2A Receptor.
J.Med.Chem., 64, 2021
4YB9
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BU of 4yb9 by Molmil
Crystal structure of the Bovine Fructose transporter GLUT5 in an open inward-facing conformation
Descriptor: Solute carrier family 2, facilitated glucose transporter member 5
Authors:Verdon, G, Kang, H.J, Iwata, S, Drew, D.
Deposit date:2015-02-18
Release date:2015-10-14
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and mechanism of the mammalian fructose transporter GLUT5.
Nature, 526, 2015
6ZDR
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BU of 6zdr by Molmil
Crystal structure of stabilized A2A adenosine receptor A2AR-StaR2-bRIL in complex with Chromone 4d
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, CHOLESTEROL, ...
Authors:Verdon, G, Jespers, W, Azuaje, J, Majellaro, M, Keranen, H, Garcia-mera, X, Congreve, M, Deflorian, F, de Graaf, C, Zhukov, A, Dore, A, Mason, J, Aqvist, J, Cooke, R, Sotelo, E, Gutierrez-de-Teran, H.
Deposit date:2020-06-15
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.918 Å)
Cite:X-Ray Crystallography and Free Energy Calculations Reveal the Binding Mechanism of A 2A Adenosine Receptor Antagonists.
Angew.Chem.Int.Ed.Engl., 59, 2020
6ZDV
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BU of 6zdv by Molmil
Crystal structure of stabilized A2A adenosine receptor A2AR-StaR2-bRIL in complex with Chromone 5d
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, ...
Authors:Verdon, G, Jespers, W, Azuaje, J, Majellaro, M, Keranen, H, Garcia-mera, X, Congreve, M, Deflorian, F, de Graaf, C, Zhukov, A, Dore, A, Mason, J, Aqvist, J, Cooke, R, Sotelo, E, Gutierrez-de-Teran, H.
Deposit date:2020-06-15
Release date:2020-09-16
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:X-Ray Crystallography and Free Energy Calculations Reveal the Binding Mechanism of A 2A Adenosine Receptor Antagonists.
Angew.Chem.Int.Ed.Engl., 59, 2020
4OYF
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BU of 4oyf by Molmil
Crystal structure of GLTPH R397A IN Sodium-bound state
Descriptor: GLUTAMATE SYMPORT PROTEIN, SODIUM ION
Authors:Boudker, O, Oh, S, Verdon, G, Serio, R.
Deposit date:2014-02-11
Release date:2014-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
Elife, 3, 2014
3KH2
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BU of 3kh2 by Molmil
Crystal structure of the P1 bacteriophage Doc toxin (F68S) in complex with the Phd antitoxin (L17M/V39A). Northeast Structural Genomics targets ER385-ER386
Descriptor: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, Death on curing protein, ...
Authors:Arbing, M.A, Kuzin, A.P, Su, M, Abashidze, M, Verdon, G, Liu, M, Xiao, R, Acton, T, Inouye, M, Montelione, G.T, Woychik, N.A, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-10-29
Release date:2010-08-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:Crystal Structures of Phd-Doc, HigA, and YeeU Establish Multiple Evolutionary Links between Microbial Growth-Regulating Toxin-Antitoxin Systems.
Structure, 18, 2010
1F4L
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BU of 1f4l by Molmil
CRYSTAL STRUCTURE OF THE E.COLI METHIONYL-TRNA SYNTHETASE COMPLEXED WITH METHIONINE
Descriptor: METHIONINE, METHIONYL-TRNA SYNTHETASE, ZINC ION
Authors:Serre, L, Verdon, G, Chonowski, T, Hervouet, N, Zelwer, C.
Deposit date:2000-06-08
Release date:2001-03-21
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:How methionyl-tRNA synthetase creates its amino acid recognition pocket upon L-methionine binding.
J.Mol.Biol., 306, 2001
5CFY
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BU of 5cfy by Molmil
CRYSTAL STRUCTURE OF GLTPH R397A IN COMPLEX WITH NA+ AND L-ASP
Descriptor: 425aa long hypothetical proton glutamate symport protein, ASPARTIC ACID, SODIUM ION
Authors:Boudker, O, Oh, S.
Deposit date:2015-07-08
Release date:2016-04-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
Elife, 3, 2014
4OYE
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BU of 4oye by Molmil
Crystal structure of GltPh R397A in apo
Descriptor: 425aa long hypothetical proton glutamate symport protein
Authors:Boudker, O, Oh, S.
Deposit date:2014-02-11
Release date:2014-09-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (4 Å)
Cite:Coupled ion binding and structural transitions along the transport cycle of glutamate transporters.
Elife, 3, 2014
4YBQ
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BU of 4ybq by Molmil
Rat GLUT5 with Fv in the outward-open form
Descriptor: Solute carrier family 2, facilitated glucose transporter member 5, antibody Fv fragment heavy chain, ...
Authors:Nomura, N, Shimamura, T, Iwata, S.
Deposit date:2015-02-19
Release date:2015-10-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Structure and mechanism of the mammalian fructose transporter GLUT5
Nature, 526, 2015
2H28
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BU of 2h28 by Molmil
Crystal structure of YeeU from E. coli. Northeast Structural Genomics target ER304
Descriptor: CHLORIDE ION, GLYCEROL, Hypothetical protein yeeU, ...
Authors:Arbing, M, Su, M, Benach, J, Karpowich, N.K, Jiang, M, Xiao, R, Cunningham, K, Ma, L.-C, Chen, C.X, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-05-18
Release date:2006-07-18
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of Phd-Doc, HigA, and YeeU Establish Multiple Evolutionary Links between Microbial Growth-Regulating Toxin-Antitoxin Systems.
Structure, 18, 2010

 

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