Author results

2B96
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THIRD CALCIUM ION FOUND IN AN INHIBITOR BOUND PHOSPHOLIPASE A2
Descriptor:Phospholipase A2, CALCIUM ION, CHLORIDE ION, ...
Authors:Sekar, K., Velmurugan, D., Yamane, T., Tsai, M.D.
Deposit date:2005-10-11
Release date:2006-03-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Third Calcium ion found in an inhibitor bound phospholipase A2
Acta Crystallogr.,Sect.D, 62, 2006
2BAX
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ATOMIC RESOLUTION STRUCTURE OF THE DOUBLE MUTANT (K53,56M) OF BOVINE PANCREATIC PHOSPHOLIPASE A2
Descriptor:Phospholipase A2, CALCIUM ION, CHLORIDE ION, ...
Authors:Sekar, K., Yogavel, M., Velmurugan, D., Dauter, Z., Dauter, M., Tsai, M.D.
Deposit date:2005-10-15
Release date:2005-10-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Atomic resolution (0.97 A) structure of the triple mutant (K53,56,121M) of bovine pancreatic phospholipase A2.
Acta Crystallogr.,Sect.F, 61, 2005
1VL9
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ATOMIC RESOLUTION (0.97A) STRUCTURE OF THE TRIPLE MUTANT (K53,56,121M) OF BOVINE PANCREATIC PHOSPHOLIPASE A2
Descriptor:Phospholipase A2, CALCIUM ION, CHLORIDE ION, ...
Authors:Sekar, K., Velmurugan, D., Rajakannan, V., Gayathri, D., Poi, M.-J., Tsai, M.-D., Dauter, M., Dauter, Z.
Deposit date:2004-07-15
Release date:2004-10-19
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (0.97 Å)
Cite:Atomic resolution (0.97 A) structure of the triple mutant (K53,56,121M) of bovine pancreatic phospholipase A2.
Acta Crystallogr.,Sect.F, 61, 2005
2IRP
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CRYSTAL STRUCTURE OF THE L-FUCULOSE-1-PHOSPHATE ALDOLASE (AQ_1979) FROM AQUIFEX AEOLICUS VF5
Descriptor:Putative aldolase class 2 protein aq_1979, CHLORIDE ION, BETA-MERCAPTOETHANOL
Authors:Jeyakanthan, J., Gayathri, D., Yogavel, M., Velmurugan, D., Baba, S., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-10-16
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the l-fuculose-1-phosphate aldolase (aq_1979) from aquifex aeolicus VF5
To be Published
2OM6
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HYPOTHETICAL PROTEIN (PROBABLE PHOSPHOSERINE PHOSPH (PH0253) FROM PYROCOCCUS HORIKOSHII OT3
Descriptor:Probable phosphoserine phosphatase, SULFATE ION, MAGNESIUM ION, ...
Authors:Jeyakanthan, J., Vaijayanthimala, S., Gayathri, D., Velmurugan, D., Baba, S., Ebihara, A., Shinkai, A., Kuramitsu, S., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-21
Release date:2008-01-29
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Hypothetical Protein (Probable Phosphoserine Phosph (PH0253) from Pyrococcus Horikoshii OT3
To be Published
2PCR
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CRYSTAL STRUCTURE OF MYO-INOSITOL-1(OR 4)-MONOPHOSPHATASE (AQ_1983) FROM AQUIFEX AEOLICUS VF5
Descriptor:Inositol-1-monophosphatase
Authors:Jeyakanthan, J., Gayathri, D., Velmurugan, D., Agari, Y., Bessho, Y., Ellis, M.J., Antonyuk, S.V., Strange, R.W., Hasnain, S.S., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-03-30
Release date:2007-10-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of Myo-inositol-1(or 4)-monophosphatase (aq_1983) from Aquifex Aeolicus VF5
To be Published
1C8Q
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STRUCTURE SOLUTION AND REFINEMENT OF THE RECOMBINANT HUMAN SALIVARY AMYLASE
Descriptor:ALPHA-AMYLASE, CALCIUM ION, CHLORIDE ION
Authors:Ramasubbu, N., Sekar, K., Velmurugan, D.
Deposit date:2000-06-08
Release date:2001-06-13
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure solution and refinment of recombinant human salivary amylase
To be Published
1GH4
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STRUCTURE OF THE TRIPLE MUTANT (K56M, K120M, K121M) OF PHOSPHOLIPASE A2
Descriptor:PHOSPHOLIPASE A2, CALCIUM ION, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Sekar, K., Velmurugan, D., Tsai, M.D.
Deposit date:2000-11-09
Release date:2001-05-09
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Observation of additional calcium ion in the crystal structure of the triple mutant K56,120,121M of bovine pancreatic phospholipase A2.
J.Mol.Biol., 324, 2002
1O2E
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STRUCTURE OF THE TRIPLE MUTANT (K53,56,120M) + ANISIC ACID COMPLEX OF PHOSPHOLIPASE A2
Descriptor:Phospholipase A2, CALCIUM ION, 4-METHOXYBENZOIC ACID
Authors:Sekar, K., Velmurugan, D., Tsai, M.D.
Deposit date:2003-03-05
Release date:2003-09-09
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures of the free and anisic acid bound triple mutant of phospholipase A2.
J.Mol.Biol., 333, 2003
1VKQ
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A RE-DETERMINATION OF THE STRUCTURE OF THE TRIPLE MUTANT (K53,56,120M) OF PHOSPHOLIPASE A2 AT 1.6A RESOLUTION USING SULPHUR-SAS AT 1.54A WAVELENGTH
Descriptor:Phospholipase A2, CALCIUM ION, CHLORIDE ION, ...
Authors:Sekar, K., Velmurugan, D., Rajakannan, V., Yamane, T., Dauter, M., Dauter, Z.
Deposit date:2004-06-12
Release date:2004-08-31
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:A redetermination of the structure of the triple mutant (K53,56,120M) of phospholipase A2 at 1.6 A resolution using sulfur-SAS at 1.54 A wavelength.
Acta Crystallogr.,Sect.D, 60, 2004
2BCH
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A POSSIBLE OF SECOND CALCIUM ION IN INTERFACIAL BINDING: ATOMIC AND MEDIUM RESOLUTION CRYSTAL STRUCTURES OF THE QUADRUPLE MUTANT OF PHOSPHOLIPASE A2
Descriptor:Phospholipase A2, CALCIUM ION, CHLORIDE ION, ...
Authors:Sekar, K., Yogavel, M., Velmurugan, D., Poi, M.J., Dauter, Z., Tsai, M.D.
Deposit date:2005-10-19
Release date:2006-07-04
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Suggestive evidence for the involvement of the second calcium and surface loop in interfacial binding: monoclinic and trigonal crystal structures of a quadruple mutant of phospholipase A(2).
Acta Crystallogr.,Sect.D, 62, 2006
2BD1
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A POSSIBLE ROLE OF THE SECOND CALCIUM ION IN INTERFACIAL BINDING: ATOMIC AND MEDIUM RESOLUTION CRYSTAL STRUCTURES OF THE QUADRUPLE MUTANT OF PHOSPHOLIPASE A2
Descriptor:Phospholipase A2, CALCIUM ION, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Sekar, K., Velmurugan, D., Tsai, M.D.
Deposit date:2005-10-19
Release date:2006-07-04
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Suggestive evidence for the involvement of the second calcium and surface loop in interfacial binding: monoclinic and trigonal crystal structures of a quadruple mutant of phospholipase A(2).
Acta Crystallogr.,Sect.D, 62, 2006
2PKP
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CRYSTAL STRUCTURE OF 3-ISOPROPYLMALATE DEHYDRATASE (LEUD)FROM METHHANOCALDOCOCCUS JANNASCHII DSM2661 (MJ1271)
Descriptor:Homoaconitase small subunit, ZINC ION, DI(HYDROXYETHYL)ETHER
Authors:Jeyakanthan, J., Gayathri, D.R., Velmurugan, D., Agari, Y., Ebihara, A., Kuramitsu, S., Shinkai, A., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-18
Release date:2008-04-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Substrate specificity determinants of the methanogen homoaconitase enzyme: structure and function of the small subunit
Biochemistry, 49, 2010
2PT5
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CRYSTAL STRUCTURE OF SHIKIMATE KINASE (AQ_2177) FROM AQUIFEX AEOLICUS VF5
Descriptor:Shikimate kinase, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER
Authors:Jeyakanthan, J., Nithya, N., Shimada, A., Velmurugan, D., Ebihara, A., Shinkai, A., Kuramitsu, S., Shiro, Y., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-08
Release date:2008-05-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure Of Shikimate Kinase (aq_2177) From Aquifex Aeolicus vf5
To be Published
2RJ2
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CRYSTAL STRUCTURE OF THE SUGAR RECOGNIZING SCF UBIQUITIN LIGASE AT 1.7 RESOLUTION
Descriptor:F-box only protein 2, NICKEL (II) ION, CHLORIDE ION
Authors:Vaijayanthimala, S., Velmurugan, D., Mizushima, T., Yamane, T., Yoshida, Y., Tanaka, K.
Deposit date:2007-10-14
Release date:2008-10-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of the Sugar Recognizing SCF Ubiquitin Ligase at 1.7 Resolution
To be Published
4H1P
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USE OF EUROPIUM FOR SAD PHASING AT THE CU K ALPHA WAVELENGTH
Descriptor:Lysozyme C, EUROPIUM ION, CHLORIDE ION, ...
Authors:Vijayakumar, B., Velmurugan, D.
Deposit date:2012-09-11
Release date:2012-10-24
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Use of europium ions for SAD phasing of Lysozyme at the Cu Kalpha wavelength
Acta Crystallogr.,Sect.F, 69, 2013
4U00
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CRYSTAL STRUCTURE OF TTHA1159 IN COMPLEX WITH ADP
Descriptor:Amino acid ABC transporter, ATP-binding protein, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Karthiga Devi, S., Chichili, V.P.R., Velmurugan, D., Sivaraman, J.
Deposit date:2014-07-11
Release date:2015-05-13
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the hydrolysis of ATP by a nucleotide binding subunit of an amino acid ABC transporter from Thermus thermophilus
J.Struct.Biol., 190, 2015
4U02
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CRYSTAL STRUCTURE OF APO-TTHA1159
Descriptor:Amino acid ABC transporter, ATP-binding protein, SULFATE ION
Authors:Karthiga Devi, S., Chichili, V.P.R., Velmurugan, D., Sivaraman, J.
Deposit date:2014-07-11
Release date:2015-05-13
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.399 Å)
Cite:Structural basis for the hydrolysis of ATP by a nucleotide binding subunit of an amino acid ABC transporter from Thermus thermophilus
J.Struct.Biol., 190, 2015
5GIB
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SUCCINIC ACID BOUND TRYPSIN CRYSTALLIZED AS DIMER
Descriptor:Cationic trypsin, SUCCINIC ACID, CALCIUM ION
Authors:Kutumbarao, N.H.V., Manohar, R., KarthiK, L., Malathy, P., Gunasekaran, K., Velmurugan, D.
Deposit date:2016-06-22
Release date:2016-08-10
Last modified:2016-08-17
Method:X-RAY DIFFRACTION (2.697 Å)
Cite:Trypsin bound with Succinic acid
To Be Published
5JYI
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TRYPSIN BOUND WITH SUCCINIC ACID AT 1.9A
Descriptor:Cationic trypsin, CALCIUM ION, SUCCINIC ACID, ...
Authors:Manohar, R., Kutumbarao, N.H.V., KarthiK, L., Malathy, P., Velmurugan, D., Gunasekaran, K.
Deposit date:2016-05-14
Release date:2016-07-06
Method:X-RAY DIFFRACTION (1.914 Å)
Cite:Trypsin bound with succinic acid at 1.9A
To Be Published
1O3W
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STRUCTURE OF THE INHIBITOR FREE TRIPLE MUTANT (K53,56,120M) OF PHOSPHOLIPASE A2
Descriptor:Phospholipase A2, CALCIUM ION, (4S)-2-METHYL-2,4-PENTANEDIOL
Authors:Sekar, K.
Deposit date:2003-04-14
Release date:2003-07-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of the free and anisic acid bound triple mutant of phospholipase A2.
J.Mol.Biol., 333, 2003
3P5U
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ACTINIDIN FROM ACTINIDIA ARGUTA PLANCH (SARUSASHI)
Descriptor:Actinidin, CADMIUM ION
Authors:Manickam, Y., Nirmal, N., Suzuki, A., Sugiyama, Y., Yamane, T., Devadasan, V., Sharma, A.
Deposit date:2010-10-11
Release date:2010-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural analysis of actinidin and a comparison of cadmium and sulfur anomalous signals from actinidin crystals measured using in-house copper- and chromium-anode X-ray sources
Acta Crystallogr.,Sect.D, 66, 2010
3P5V
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ACTINIDIN FROM ACTINIDIA ARGUTA PLANCH (SARUSASHI)
Descriptor:Actinidin, CADMIUM ION
Authors:Manickam, Y., Nirmal, N., Suzuki, A., Sugiyama, Y., Yamane, T., Devadasan, V., Sharma, A.
Deposit date:2010-10-11
Release date:2010-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of actinidin and a comparison of cadmium and sulfur anomalous signals from actinidin crystals measured using in-house copper- and chromium-anode X-ray sources
Acta Crystallogr.,Sect.D, 66, 2010
3P5W
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ACTINIDIN FROM ACTINIDIA ARGUTA PLANCH (SARUSASHI)
Descriptor:Actinidin, CADMIUM ION
Authors:Manickam, Y., Nirmal, N., Suzuki, A., Sugiyama, Y., Yamane, T., Devadasan, V., Sharma, A.
Deposit date:2010-10-11
Release date:2010-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of actinidin and a comparison of cadmium and sulfur anomalous signals from actinidin crystals measured using in-house copper- and chromium-anode X-ray sources
Acta Crystallogr.,Sect.D, 66, 2010
3P5X
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ACTINIDIN FROM ACTINIDIA ARGUTA PLANCH (SARUSASHI)
Descriptor:Actinidin, CADMIUM ION
Authors:Manickam, Y., Nirmal, N., Suzuki, A., Sugiyama, Y., Yamane, T., Devadasan, V., Sharma, A.
Deposit date:2010-10-11
Release date:2010-11-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of actinidin and a comparison of cadmium and sulfur anomalous signals from actinidin crystals measured using in-house copper- and chromium-anode X-ray sources
Acta Crystallogr.,Sect.D, 66, 2010