Author results

3HG0
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CRYSTAL STRUCTURE OF A DARPIN IN COMPLEX WITH ORF49 FROM LACTOCOCCAL PHAGE TP901-1
Descriptor:Baseplate protein, Designed Ankyrin Repeat Protein (DARPin) 20
Authors:Veesler, D., Dreier, B., Blangy, S., Lichiere, J., Tremblay, D., Moineau, S., Spinelli, S., Tegoni, M., Pluckthun, A., Campanacci, V., Cambillau, C.
Deposit date:2009-05-13
Release date:2009-09-08
Last modified:2013-09-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and function of a DARPin neutralizing inhibitor of lactococcal phage TP901-1: comparison of DARPin and camelid VHH binding mode.
J.Biol.Chem., 284, 2009
3U6X
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PHAGE TP901-1 BASEPLATE TRIPOD
Descriptor:BPP, ORF48, BROMIDE ION
Authors:Veesler, D., Spinelli, S., Mahony, J., Lichiere, J., Blangy, S., Bricogne, G., Legrand, P., Ortiz-Lombardia, M., Campanacci, V.I., van Sinderen, D., Cambillau, C.
Deposit date:2011-10-13
Release date:2012-07-04
Last modified:2012-07-11
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism.
Proc.Natl.Acad.Sci.USA, 109, 2012
3UH8
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N-TERMINAL DOMAIN OF PHAGE TP901-1 ORF48
Descriptor:ORF48
Authors:Veesler, D., Spinelli, S., Mahony, J., Lichiere, J., Blangy, S., Bricogne, G., Legrand, P., Ortiz-Lombardia, M., Campanacci, V.I., van Sinderen, D., Cambillau, C.
Deposit date:2011-11-03
Release date:2012-05-30
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism.
Proc.Natl.Acad.Sci.USA, 109, 2012
4V96
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THE STRUCTURE OF A 1.8 MDA VIRAL GENOME INJECTION DEVICE SUGGESTS ALTERNATIVE INFECTION MECHANISMS
Descriptor:ORF48, ORF46, BPP
Authors:Veesler, D., Spinelli, S., Mahony, J., Lichiere, J., Blangy, S., Bricogne, G., Legrand, P., Ortiz-Lombardia, M., Campanacci, V., van Sinderen, D., Cambillau, C.
Deposit date:2012-02-01
Release date:2014-07-09
Last modified:2014-12-10
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structure of the phage TP901-1 1.8 MDa baseplate suggests an alternative host adhesion mechanism.
Proc.Natl.Acad.Sci.USA, 109, 2012
2X8K
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CRYSTAL STRUCTURE OF SPP1 DIT (GP 19.1) PROTEIN, A PARADIGM OF HUB ADSORPTION APPARATUS IN GRAM-POSITIVE INFECTING PHAGES.
Descriptor:HYPOTHETICAL PROTEIN 19.1
Authors:Veesler, D., Robin, G., Lichiere, J., Auzat, I., Tavares, P., Bron, P., Campanacci, V., Cambillau, C.
Deposit date:2010-03-10
Release date:2010-09-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Crystal Structure of Bacteriophage Spp1 Distal Tail Protein (Gp 19.1): A Baseplate Hub Paradigm in Gram+ Infecting Phages.
J.Biol.Chem., 285, 2010
2XC8
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CRYSTAL STRUCTURE OF THE GENE 22 PRODUCT OF THE BACILLUS SUBTILIS SPP1 PHAGE
Descriptor:GENE 22 PRODUCT
Authors:Veesler, D., Blangy, S., Tavares, P., Campanacci, V., Cambillau, C.
Deposit date:2010-04-19
Release date:2010-06-09
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal Structure of Bacillus Subtilis Spp1 Phage Gp22 Shares Fold Similarity with a Domain of Lactococcal Phage P2 Rbp.
Protein Sci., 19, 2010
2XF5
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CRYSTAL STRUCTURE OF BACILLUS SUBTILIS SPP1 PHAGE GP23.1, A PUTATIVE CHAPERONE.
Descriptor:GP23.1
Authors:Veesler, D., Blangy, S., Lichiere, J., Ortiz-Lombardia, M., Tavares, P., Campanacci, V., Cambillau, C.
Deposit date:2010-05-20
Release date:2010-08-11
Last modified:2017-07-12
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Bacillus Subtilis Spp1 Phage Gp23.1, A Putative Chaperone.
Protein Sci., 19, 2010
2XF6
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CRYSTAL STRUCTURE OF BACILLUS SUBTILIS SPP1 PHAGE GP23.1, A PUTATIVE CHAPERONE.
Descriptor:GP23.1
Authors:Veesler, D., Blangy, S., Lichiere, J., Ortiz-Lombardia, M., Tavares, P., Campanacci, V., Cambillau, C.
Deposit date:2010-05-20
Release date:2010-08-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal Structure of Bacillus Subtilis Spp1 Phage Gp23.1, A Putative Chaperone.
Protein Sci., 19, 2010
2XF7
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CRYSTAL STRUCTURE OF BACILLUS SUBTILIS SPP1 PHAGE GP23.1, A PUTATIVE CHAPERONE. HIGH-RESOLUTION STRUCTURE.
Descriptor:GP23.1
Authors:Veesler, D., Blangy, S., Lichiere, J., Ortiz-Lombardia, M., Tavares, P., Campanacci, V., Cambillau, C.
Deposit date:2010-05-20
Release date:2010-08-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Crystal Structure of Bacillus Subtilis Spp1 Phage Gp23.1, A Putative Chaperone.
Protein Sci., 19, 2010
3D9B
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SYMMETRIC STRUCTURE OF E. COLI ACRB
Descriptor:Acriflavine resistance protein B, NICKEL (II) ION
Authors:Veesler, D., Blangy, S., Cambillau, C., Sciara, G.
Deposit date:2008-05-27
Release date:2008-07-01
Last modified:2012-03-21
Method:X-RAY DIFFRACTION (3.42 Å)
Cite:There is a baby in the bath water: AcrB contamination is a major problem in membrane-protein crystallization.
Acta Crystallogr.,Sect.F, 64, 2008
3J31
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LIFE IN THE EXTREMES: ATOMIC STRUCTURE OF SULFOLOBUS TURRETED ICOSAHEDRAL VIRUS
Descriptor:A223 penton base, A55 membrane protein, Coat protein, ...
Authors:Veesler, D., Ng, T.S., Sendamarai, A.K., Eilers, B.J., Lawrence, C.M., Lok, S.M., Young, M.J., Johnson, J.E., Fu, C.-Y.
Deposit date:2013-02-18
Release date:2013-05-01
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography.
Proc.Natl.Acad.Sci.USA, 110, 2013
6X79
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PREFUSION SARS-COV-2 S ECTODOMAIN TRIMER COVALENTLY STABILIZED IN THE CLOSED CONFORMATION
Descriptor:SARS-CoV-2 spike glycoprotein, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:McCallum, M., Walls, A.C., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-05-29
Release date:2020-08-19
Last modified:2020-10-21
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structure-guided covalent stabilization of coronavirus spike glycoprotein trimers in the closed conformation.
Nat.Struct.Mol.Biol., 27, 2020
6WPS
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STRUCTURE OF THE SARS-COV-2 SPIKE GLYCOPROTEIN IN COMPLEX WITH THE S309 NEUTRALIZING ANTIBODY FAB FRAGMENT
Descriptor:SARS-CoV-2 spike glycoprotein, S309 neutralizing antibody heavy chain, S309 neutralizing antibody light chain, ...
Authors:Pinto, D., Park, Y.J., Beltramello, M., Walls, A.C., Tortorici, M.A., Bianchi, S., Jaconi, S., Culap, K., Zatta, F., De Marco, A., Peter, A., Guarino, B., Spreafico, R., Cameroni, E., Case, J.B., Chen, R.E., Havenar-Daughton, C., Snell, G., Virgin, H.W., Lanzavecchia, A., Diamond, M.S., Fink, K., Veesler, D., Corti, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-04-27
Release date:2020-05-27
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural and functional analysis of a potent sarbecovirus neutralizing antibody.
Biorxiv, 2020
6WPT
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STRUCTURE OF THE SARS-COV-2 SPIKE GLYCOPROTEIN IN COMPLEX WITH THE S309 NEUTRALIZING ANTIBODY FAB FRAGMENT (OPEN STATE)
Descriptor:SARS-CoV-2 spike glycoprotein, S309 neutralizing antibody heavy chain, S309 neutralizing antibody light chain, ...
Authors:Pinto, D., Park, Y.J., Beltramello, M., Walls, A.C., Tortorici, M.A., Bianchi, S., Jaconi, S., Culap, K., Zatta, F., De Marco, A., Peter, A., Guarino, B., Spreafico, R., Cameroni, E., Case, J.B., Chen, R.E., Havenar-Daughton, C., Snell, G., Virgin, H.W., Lanzavecchia, A., Diamond, M.S., Fink, K., Veesler, D., Corti, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-04-27
Release date:2020-05-27
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural and functional analysis of a potent sarbecovirus neutralizing antibody.
Biorxiv, 2020
6WS6
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STRUCTURAL AND FUNCTIONAL ANALYSIS OF A POTENT SARBECOVIRUS NEUTRALIZING ANTIBODY
Descriptor:S309 antigen-binding (Fab) fragment, heavy chain, light chain, ...
Authors:Pinto, D., Park, Y.J., Beltramello, M., Walls, A.C., Tortorici, M.A., Bianchi, S., Jaconi, S., Culap, K., Zatta, F., Marco, A.D., Peter, A., Guarino, B., Spreafico, R., Cameroni, E., Case, J.B., Chen, R.E., Havenar-Daughton, C., Snell, G., Telenti, A., Virgin, H.W., Lanzavecchia, A., Diamond, M.S., Fink, K., Veesler, D., Corti, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-04-30
Release date:2020-05-27
Last modified:2020-06-24
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural and functional analysis of a potent sarbecovirus neutralizing antibody.
Biorxiv, 2020
7JX3
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MAPPING NEUTRALIZING AND IMMUNODOMINANT SITES ON THE SARS-COV-2 SPIKE RECEPTOR-BINDING DOMAIN BY STRUCTURE-GUIDED HIGH-RESOLUTION SEROLOGY
Descriptor:Light chain of Fab domain of monoclonal antibody S309, Heavy chain of Fab domain of monoclonal antibody S309, Light chain of Fab domain of monoclonal antibody S2H14, ...
Authors:Snell, G., Czudnochowski, N., Rosen, L.E., Nix, J.C., Corti, D., Veesler, D., Park, Y.J., Walls, A.C., Tortorici, M.A., Cameroni, E., Pinto, D., Beltramello, M.
Deposit date:2020-08-26
Release date:2020-10-14
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
6NB3
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MERS-COV COMPLEX WITH HUMAN NEUTRALIZING LCA60 ANTIBODY FAB FRAGMENT (STATE 1)
Descriptor:Spike glycoprotein, LCA60 light chain, LCA60 heavy chain, ...
Authors:Walls, A.C., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, S., Quispe, J., Cameroni, E., Gopal, R., Mian, D., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-12-06
Release date:2019-02-06
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Unexpected Receptor Functional Mimicry Elucidates Activation of Coronavirus Fusion.
Cell, 176, 2019
6NB4
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MERS-COV S COMPLEX WITH HUMAN NEUTRALIZING LCA60 ANTIBODY FAB FRAGMENT (STATE 2)
Descriptor:Spike glycoprotein, LCA60 heavy chain, LCA60 light chain, ...
Authors:Walls, A.C., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, S., Quispe, J., Cameroni, E., Gopal, R., Mian, D., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-12-06
Release date:2019-02-06
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Unexpected Receptor Functional Mimicry Elucidates Activation of Coronavirus Fusion.
Cell, 176, 2019
6NB6
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SARS-COV COMPLEX WITH HUMAN NEUTRALIZING S230 ANTIBODY FAB FRAGMENT (STATE 1)
Descriptor:Spike glycoprotein, S230 heavy chain, S230 light chain, ...
Authors:Walls, A.C., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, S., Quispe, J., Cameroni, E., Gopal, R., Mian, D., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-12-06
Release date:2019-02-06
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Unexpected Receptor Functional Mimicry Elucidates Activation of Coronavirus Fusion.
Cell, 176, 2019
6NB7
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SARS-COV COMPLEX WITH HUMAN NEUTRALIZING S230 ANTIBODY FAB FRAGMENT (STATE 2)
Descriptor:Spike glycoprotein, S230 heavy chain, S230 light chain, ...
Authors:Walls, A.C., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, S., Quispe, J., Cameroni, E., Gopal, R., Mian, D., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2018-12-06
Release date:2019-02-06
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.5 Å)
Cite:Unexpected Receptor Functional Mimicry Elucidates Activation of Coronavirus Fusion.
Cell, 176, 2019
7JV2
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SARS-COV-2 SPIKE IN COMPLEX WITH THE S2H13 NEUTRALIZING ANTIBODY FAB FRAGMENT (LOCAL REFINEMENT OF THE RECEPTOR-BINDING MOTIF AND FAB VARIABLE DOMAINS)
Descriptor:S2H13 Fab heavy chain, S2H13 Fab light chain, SARS-CoV-2 spike glycoprotein
Authors:Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
Deposit date:2020-08-20
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
7JV4
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SARS-COV-2 SPIKE IN COMPLEX WITH THE S2H13 NEUTRALIZING ANTIBODY (ONE RBD OPEN)
Descriptor:SARS-CoV-2 spike glycoprotein, S2H13 Fab heavy chain, S2H13 Fab light chain, ...
Authors:Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
Deposit date:2020-08-20
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
7JV6
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SARS-COV-2 SPIKE IN COMPLEX WITH THE S2H13 NEUTRALIZING ANTIBODY (CLOSED CONFORMATION)
Descriptor:SARS-CoV-2 spike glycoprotein, S2H13 Fab heavy chain, S2H13 Fab light chain, ...
Authors:Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
Deposit date:2020-08-20
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
7JVA
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SARS-COV-2 SPIKE IN COMPLEX WITH THE S2A4 NEUTRALIZING ANTIBODY FAB FRAGMENT (LOCAL REFINEMENT OF THE RECEPTOR-BINDING DOMAIN AND FAB VARIABLE DOMAINS)
Descriptor:S2A4 Fab heavy chain, S2A4 Fab light chain, SARS-CoV-2 spike glycoprotein, ...
Authors:Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
Deposit date:2020-08-20
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
7JVC
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SARS-COV-2 SPIKE IN COMPLEX WITH THE S2A4 NEUTRALIZING ANTIBODY FAB FRAGMENT
Descriptor:SARS-CoV-2 spike glycoprotein, S2A4 Fab heavy chain, S2A4 Fab light chain, ...
Authors:Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D.
Deposit date:2020-08-20
Release date:2020-10-14
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Mapping Neutralizing and Immunodominant Sites on the SARS-CoV-2 Spike Receptor-Binding Domain by Structure-Guided High-Resolution Serology.
Cell(Cambridge,Mass.), 2020
170172
PDB entries from 2020-10-21