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1FP8
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STRUCTURE OF THE AMYLOMALTASE FROM THERMUS THERMOPHILUS HB8 IN SPACE GROUP P21212
Descriptor:4-ALPHA-GLUCANOTRANSFERASE, MERCURY (II) ION, CHLORIDE ION
Authors:Uitdehaag, J.C.M., Euverink, G.J., van der Veen, B.A., van der Maarel, M., Dijkstra, B.W.
Deposit date:2000-08-31
Release date:2003-09-02
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and mechanism of the amylomaltase from Thermus thermophilus HB8
To be Published
1FP9
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STRUCTURE OF AMYLOMALTASE FROM THERMUS THERMOPHILUS HB8 IN SPACE GROUP C2
Descriptor:4-ALPHA-GLUCANOTRANSFERASE
Authors:Uitdehaag, J.C.M., Euverink, G.J., van der Veen, B.A., van der Maarel, M., Dijkstra, B.W.
Deposit date:2000-08-31
Release date:2003-09-02
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of the amylomaltase from Thermus thermophilus HB8 in space group C2
To be Published
5NAD
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TTK KINASE DOMAIN IN COMPLEX WITH BAY 1217389
Descriptor:Dual specificity protein kinase TTK, BAY 1217389
Authors:Uitdehaag, J.C.M., Willemsen-Seegers, N., Sterrenburg, J.G., de Man, J., Buijsman, R.C., Zaman, G.J.R.
Deposit date:2017-02-27
Release date:2017-05-31
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Target Residence Time-Guided Optimization on TTK Kinase Results in Inhibitors with Potent Anti-Proliferative Activity.
J. Mol. Biol., 429, 2017
1EO5
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BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE IN COMPLEX WITH MALTOHEPTAOSE
Descriptor:PROTEIN (CYCLODEXTRIN GLYCOSYLTRANSFERASE), BETA-D-GLUCOSE, ALPHA-D-GLUCOSE, ...
Authors:Uitdehaag, J.C.M., Dijkstra, B.W.
Deposit date:2000-03-22
Release date:2000-11-22
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of maltohexaose and maltoheptaose bound at the donor sites of cyclodextrin glycosyltransferase give insight into the mechanisms of transglycosylation activity and cyclodextrin size specificity.
Biochemistry, 39, 2000
1EO7
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BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE IN COMPLEX WITH MALTOHEXAOSE
Descriptor:PROTEIN (CYCLODEXTRIN GLYCOSYLTRANSFERASE), ALPHA-D-GLUCOSE, CALCIUM ION
Authors:Uitdehaag, J.C.M., Dijkstra, B.W.
Deposit date:2000-03-22
Release date:2000-11-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Structures of maltohexaose and maltoheptaose bound at the donor sites of cyclodextrin glycosyltransferase give insight into the mechanisms of transglycosylation activity and cyclodextrin size specificity.
Biochemistry, 39, 2000
1CXK
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COMPLEX BETWEEN A MALTONONAOSE SUBSTRATE AND BACILLUS CIRCULANS STRAIN 251 CGTASE E257Q/D229N
Descriptor:PROTEIN (CYCLODEXTRIN-GLYCOSYLTRANSFERASE), ALPHA-D-GLUCOSE, CALCIUM ION
Authors:Uitdehaag, J.C.M., Kalk, K.H., Dijkstra, B.W.
Deposit date:1999-02-24
Release date:1999-05-03
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:X-ray structures along the reaction pathway of cyclodextrin glycosyltransferase elucidate catalysis in the alpha-amylase family.
Nat.Struct.Biol., 6, 1999
1CXL
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COMPLEX BETWEEN A COVALENT INTERMEDIATE AND BACILLUS CIRCULANS STRAIN 251 CGTASE E257Q
Descriptor:PROTEIN (CYCLODEXTRIN-GLYCOSYLTRANSFERASE), ALPHA-D-GLUCOSE, 4-DEOXY-ALPHA-D-GLUCOSE, ...
Authors:Uitdehaag, J.C.M., Dijkstra, B.W.
Deposit date:1999-02-27
Release date:1999-05-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:X-ray structures along the reaction pathway of cyclodextrin glycosyltransferase elucidate catalysis in the alpha-amylase family.
Nat.Struct.Biol., 6, 1999
1D3C
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MICHAELIS COMPLEX OF BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE WITH GAMMA-CYCLODEXTRIN
Descriptor:CYCLODEXTRIN GLYCOSYLTRANSFERASE, ALPHA-D-GLUCOSE, CALCIUM ION, ...
Authors:Uitdehaag, J.C.M., Kalk, K.H., van der Veen, B.A., Dijkhuizen, L., Dijkstra, B.W.
Deposit date:1999-09-29
Release date:1999-12-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:The cyclization mechanism of cyclodextrin glycosyltransferase (CGTase) as revealed by a gamma-cyclodextrin-CGTase complex at 1.8-A resolution.
J.Biol.Chem., 274, 1999
1DTU
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BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYLTRANSFERASE: A MUTANT Y89D/S146P COMPLEXED TO AN HEXASACCHARIDE INHIBITOR
Descriptor:PROTEIN (CYCLODEXTRIN GLYCOSYLTRANSFERASE), ALPHA-D-GLUCOSE, 6-DEOXY-ALPHA-D-GLUCOSE, ...
Authors:Uitdehaag, J.C.M., Kalk, K.H., Dijkstra, B.W.
Deposit date:2000-01-13
Release date:2000-03-06
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Rational design of cyclodextrin glycosyltransferase from Bacillus circulans strain 251 to increase alpha-cyclodextrin production.
J.Mol.Biol., 296, 2000
1NT0
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CRYSTAL STRUCTURE OF THE CUB1-EGF-CUB2 REGION OF MASP2
Descriptor:mannose-binding protein associated serine protease-2, N-ACETYL-D-GLUCOSAMINE, CALCIUM ION, ...
Authors:Feinberg, H., Uitdehaag, J.C.M., Davies, J.M., Wallis, R., Drickamer, K., Weis, W.I.
Deposit date:2003-01-28
Release date:2003-05-20
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the CUB1-EGF-CUB2 region of mannose-binding protein associated serine protease-2
Embo J., 22, 2003
2DIJ
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COMPLEX OF A Y195F MUTANT CGTASE FROM B. CIRCULANS STRAIN 251 COMPLEXED WITH A MALTONONAOSE INHIBITOR AT PH 9.8 OBTAINED AFTER SOAKING THE CRYSTAL WITH ACARBOSE AND MALTOHEXAOSE
Descriptor:CYCLODEXTRIN GLYCOSYLTRANSFERASE, ALPHA-D-GLUCOSE, 6-DEOXY-ALPHA-D-GLUCOSE, ...
Authors:Strokopytov, B.V., Knegtel, R.M.A., Uitdehaag, J.C.M., Dijkstra, B.W.
Deposit date:1998-05-27
Release date:1998-12-09
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of cyclodextrin glycosyltransferase complexed with a maltononaose inhibitor at 2.6 angstrom resolution. Implications for product specificity.
Biochemistry, 35, 1996
2W8Y
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RU486 BOUND TO THE PROGESTERONE RECEPTOR IN A DESTABILIZED AGONISTIC CONFORMATION
Descriptor:PROGESTERONE RECEPTOR, 11-(4-DIMETHYLAMINO-PHENYL)-17-HYDROXY-13-METHYL-17-PROP-1-YNYL-1,2,6,7,8,11,12,13,14,15,16,17-DODEC AHYDRO-CYCLOPENTA[A]PHENANTHREN-3-ONE, SULFATE ION, ...
Authors:Raaijmakers, H.C.A., Versteeg, J., Uitdehaag, J.C.M.
Deposit date:2009-01-20
Release date:2009-04-28
Last modified:2017-12-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The X-Ray Structure of Ru486 Bound to the Progesterone Receptor in a Destabilized Agonistic Conformation.
J.Biol.Chem., 284, 2009
2CXG
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CYCLODEXTRIN GLYCOSYLTRANSFERASE COMPLEXED TO THE INHIBITOR ACARBOSE
Descriptor:CYCLODEXTRIN GLYCOSYLTRANSFERASE, ALPHA-D-GLUCOSE, 6-DEOXY-ALPHA-D-GLUCOSE, ...
Authors:Strokopytov, B.V., Uitdehaag, J.C.M., Ruiterkamp, R., Dijkstra, B.W.
Deposit date:1998-05-08
Release date:1998-10-14
Last modified:2018-04-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structure of cyclodextrin glycosyltransferase complexed with acarbose. Implications for the catalytic mechanism of glycosidases.
Biochemistry, 34, 1995
5N84
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TTK KINASE DOMAIN IN COMPLEX WITH MPS-BAY2B
Descriptor:Dual specificity protein kinase TTK, ~{N}-cyclopropyl-4-[8-(2-methylpropylamino)imidazo[1,2-a]pyrazin-3-yl]benzamide, SODIUM ION, ...
Authors:Uitdehaag, J., Willemsen-Seegers, N., de Man, J., Buijsman, R.C., Zaman, G.J.R.
Deposit date:2017-02-22
Release date:2017-05-31
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Target Residence Time-Guided Optimization on TTK Kinase Results in Inhibitors with Potent Anti-Proliferative Activity.
J. Mol. Biol., 429, 2017
1A47
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CGTASE FROM THERMOANAEROBACTERIUM THERMOSULFURIGENES EM1 IN COMPLEX WITH A MALTOHEXAOSE INHIBITOR
Descriptor:CYCLODEXTRIN GLYCOSYLTRANSFERASE, ALPHA-D-GLUCOSE, 6-DEOXY-ALPHA-D-GLUCOSE, ...
Authors:Uitdehaag, J.C.M., Kalk, K.H., Rozeboom, H.J., Dijkstra, B.W.
Deposit date:1998-02-11
Release date:1998-06-17
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.56 Å)
Cite:Engineering of cyclodextrin product specificity and pH optima of the thermostable cyclodextrin glycosyltransferase from Thermoanaerobacterium thermosulfurigenes EM1.
J.Biol.Chem., 273, 1998
3KW9
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X-RAY STRUCTURE OF CATHEPSIN K COVALENTLY BOUND TO A TRIAZINE LIGAND
Descriptor:Cathepsin K, 4-(cyclohexylamino)-6-piperazin-1-yl-1,3,5-triazine-2-carbonitrile, trifluoroacetic acid
Authors:Uitdehaag, J.C.M., van Zeeland, M.
Deposit date:2009-12-01
Release date:2010-03-02
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Design and optimization of a series of novel 2-cyano-pyrimidines as cathepsin K inhibitors.
Bioorg.Med.Chem.Lett., 20, 2010
3KWB
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STRUCTURE OF CATK COVALENTLY BOUND TO A DIOXO-TRIAZINE INHIBITOR
Descriptor:Cathepsin K, 3,5-dioxo-4-(3-piperidin-1-ylpropyl)-2-[3-(trifluoromethyl)phenyl]-2,3,4,5-tetrahydro-1,2,4-triazine-6-carbonitrile
Authors:Uitdehaag, J.C.M., van Zeeland, M.
Deposit date:2009-12-01
Release date:2010-04-07
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Dioxo-triazines as a novel series of cathepsin K inhibitors
Bioorg.Med.Chem.Lett., 20, 2010
5N7V
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TTK KINASE DOMAIN IN COMPLEX WITH MPI-0479605
Descriptor:Dual specificity protein kinase TTK, ~{N}6-cyclohexyl-~{N}2-(2-methyl-4-morpholin-4-yl-phenyl)-7~{H}-purine-2,6-diamine, 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL
Authors:Uitdehaag, J., Willemsen-Seegers, N., Zaman, G.J.R.
Deposit date:2017-02-21
Release date:2017-05-31
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Target Residence Time-Guided Optimization on TTK Kinase Results in Inhibitors with Potent Anti-Proliferative Activity.
J. Mol. Biol., 429, 2017
5N87
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TTK KINASE DOMAIN IN COMPLEX WITH NTRC 0066-0
Descriptor:Dual specificity protein kinase TTK, ~{N}-(2,6-diethylphenyl)-2-[[2-methoxy-4-(4-methylpiperazin-1-yl)phenyl]amino]-5,6-dihydropyrimido[4,5-e]indolizine-7-carboxamide, 2,5,8,11-TETRAOXATRIDECANE, ...
Authors:Uitdehaag, J., Willemsen-Seegers, N., Sterrenburg, J.G., de Man, J., Buijsman, R.C., Zaman, G.J.R.
Deposit date:2017-02-23
Release date:2017-05-31
Last modified:2017-07-05
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Target Residence Time-Guided Optimization on TTK Kinase Results in Inhibitors with Potent Anti-Proliferative Activity.
J. Mol. Biol., 429, 2017
5N93
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TTK KINASE DOMAIN IN COMPLEX WITH TC-MPS1-12
Descriptor:Dual specificity protein kinase TTK, 4-[[4-azanyl-6-(~{tert}-butylamino)-5-cyano-pyridin-2-yl]amino]benzamide
Authors:Uitdehaag, J., Willemsen-Seegers, N., de Man, J., Buijsman, R.C., Zaman, G.J.R.
Deposit date:2017-02-24
Release date:2017-05-31
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Target Residence Time-Guided Optimization on TTK Kinase Results in Inhibitors with Potent Anti-Proliferative Activity.
J. Mol. Biol., 429, 2017
5N9S
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TTK KINASE DOMAIN IN COMPLEX WITH BAY 1161909
Descriptor:Dual specificity protein kinase TTK, (2~{R})-2-(4-fluorophenyl)-~{N}-[4-[2-[(2-methoxy-4-methylsulfonyl-phenyl)amino]-[1,2,4]triazolo[1,5-a]pyridin-6-yl]phenyl]propanamide
Authors:Uitdehaag, J., Willemsen-Seegers, N., de Man, J., Buijsman, R.C., Zaman, G.J.R.
Deposit date:2017-02-27
Release date:2017-05-31
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Target Residence Time-Guided Optimization on TTK Kinase Results in Inhibitors with Potent Anti-Proliferative Activity.
J. Mol. Biol., 429, 2017
5NA0
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TTK KINASE DOMAIN IN COMPLEX WITH A PEG-LINKED PYRIMIDO-INDOLIZINE
Descriptor:Dual specificity protein kinase TTK, ~{N}-[3,5-diethyl-1-[2-[2-(2-methoxyethoxy)ethoxy]ethyl]pyrazol-4-yl]-2-[[2-methoxy-4-[4-(2-methoxyethanoyl)piperazin-1-yl]phenyl]amino]-5,6-dihydropyrimido[4,5-e]indolizine-7-carboxamide
Authors:Uitdehaag, J., Willemsen-Seegers, N., de Man, J., Buijsman, R.C., Zaman, G.J.R.
Deposit date:2017-02-27
Release date:2017-05-31
Last modified:2017-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Target Residence Time-Guided Optimization on TTK Kinase Results in Inhibitors with Potent Anti-Proliferative Activity.
J. Mol. Biol., 429, 2017
1KCK
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BACILLUS CIRCULANS STRAIN 251 CYCLODEXTRIN GLYCOSYL TRANSFERASE MUTANT N193G
Descriptor:CYCLODEXTRIN GLYCOSYLTRANSFERASE, ALPHA-D-GLUCOSE, 6-DEOXY-ALPHA-D-GLUCOSE, ...
Authors:Rozeboom, H.J., Uitdehaag, J.C.M., Dijkstra, B.W.
Deposit date:2001-11-09
Release date:2002-01-16
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:The remote substrate binding subsite -6 in cyclodextrin-glycosyltransferase controls the transferase activity of the enzyme via an induced-fit mechanism.
J.Biol.Chem., 277, 2002
1KCL
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BACILLUS CIRUCLANS STRAIN 251 CYCLODEXTRIN GLYCOSYL TRANSFERASE MUTANT G179L
Descriptor:Cyclodextrin glycosyltransferase, MALTOSE, ALPHA-D-GLUCOSE, ...
Authors:Rozeboom, H.J., Uitdehaag, J.C.M., Dijkstra, B.W.
Deposit date:2001-11-09
Release date:2002-01-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:The remote substrate binding subsite -6 in cyclodextrin-glycosyltransferase controls the transferase activity of the enzyme via an induced-fit mechanism.
J.Biol.Chem., 277, 2002
3IPQ
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X-RAY STRUCTURE OF GW3965 SYNTHETIC AGONIST BOUND TO THE LXR-ALPHA
Descriptor:Oxysterols receptor LXR-alpha, Nuclear receptor coactivator 1, [3-(3-{[2-chloro-3-(trifluoromethyl)benzyl](2,2-diphenylethyl)amino}propoxy)phenyl]acetic acid, ...
Authors:Fradera, X., Vu, D., Nimz, O., Skene, R., Hosfield, D., Wijnands, R., Cooke, A.J., Haunso, A., King, A., Bennet, D.J., McGuire, R., Uitdehaag, J.C.M.
Deposit date:2009-08-18
Release date:2010-06-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:X-ray structures of the LXRalpha LBD in its homodimeric form and implications for heterodimer signaling.
J.Mol.Biol., 399, 2010
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