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5AVE
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BU of 5ave by Molmil
The ligand binding domain of Mlp37 with serine
Descriptor: Methyl-accepting chemotaxis (MCP) signaling domain protein, SERINE
Authors:Takahashi, Y, Sumita, K, Uchida, Y, Nishiyama, S, Kawagishi, I, Imada, K.
Deposit date:2015-06-15
Release date:2016-03-02
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of a Vibrio cholerae chemoreceptor that senses taurine and amino acids as attractants
Sci Rep, 6, 2016
5AVF
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BU of 5avf by Molmil
The ligand binding domain of Mlp37 with taurine
Descriptor: 2-AMINOETHANESULFONIC ACID, Methyl-accepting chemotaxis (MCP) signaling domain protein
Authors:Takahashi, Y, Sumita, K, Uchida, Y, Nishiyama, S, Kawagishi, I, Imada, K.
Deposit date:2015-06-15
Release date:2016-06-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Identification of a Vibrio cholerae chemoreceptor that senses taurine and amino acids as attractants
Sci Rep, 6, 2016
5B0O
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BU of 5b0o by Molmil
Structure of the FliH-FliI complex
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Flagellar assembly protein FliH, Flagellum-specific ATP synthase
Authors:Imada, K, Uchida, Y, Kinoshita, M, Namba, K, Minamino, T.
Deposit date:2015-11-02
Release date:2016-03-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Insight into the flagella type III export revealed by the complex structure of the type III ATPase and its regulator
Proc.Natl.Acad.Sci.USA, 113, 2016
7ECK
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BU of 7eck by Molmil
RNA duplex containing C-Ag-A and U-Ag-A base pairs
Descriptor: DNA/RNA (5'-R(*GP*GP*AP*CP*U)-D(P*(CBR))-R(P*GP*AP*AP*UP*CP*C)-3'), SILVER ION
Authors:Kondo, J, Uchida, Y.
Deposit date:2021-03-12
Release date:2022-03-16
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:RNA duplex containing C-Ag-A and U-Ag-A base pairs
To Be Published
7ECJ
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BU of 7ecj by Molmil
RNA duplex containing C-A base pairs
Descriptor: DNA/RNA (5'-R(*GP*GP*AP*CP*U)-D(P*(CBR))-R(P*GP*AP*AP*UP*CP*C)-3')
Authors:Kondo, J, Uchida, Y.
Deposit date:2021-03-12
Release date:2022-03-16
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:RNA duplex containing C-A base pairs
To Be Published
7ECL
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BU of 7ecl by Molmil
RNA duplex containing C-Ag-A and U-Ag-A base pair
Descriptor: DNA/RNA (5'-R(*GP*GP*AP*CP*U)-D(P*(CBR))-R(P*GP*AP*AP*UP*CP*C)-3'), SILVER ION
Authors:Kondo, J, Uchida, Y.
Deposit date:2021-03-12
Release date:2022-03-16
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:RNA duplex containing C-Ag-A and U-Ag-A base pair
To Be Published
3WZ4
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BU of 3wz4 by Molmil
Structure of the periplasmic domain of DotI (crystal form I)
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, DotI
Authors:Kuroda, T, Kubori, T, Uchida, Y, Nagai, H, Imada, K.
Deposit date:2014-09-18
Release date:2015-06-10
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Molecular and structural analysis of Legionella DotI gives insights into an inner membrane complex essential for type IV secretion
Sci Rep, 5, 2015
3WZ3
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BU of 3wz3 by Molmil
Structure of a periplasmic fragment of TraM
Descriptor: SULFATE ION, TraM protein
Authors:Kuroda, T, Kubori, T, Uchida, Y, Nagai, H, Imada, K.
Deposit date:2014-09-18
Release date:2015-06-10
Last modified:2016-06-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Molecular and structural analysis of Legionella DotI gives insights into an inner membrane complex essential for type IV secretion
Sci Rep, 5, 2015
3WZ5
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BU of 3wz5 by Molmil
Structure of the periplasmic domain of DotI (crystal form II)
Descriptor: DotI
Authors:Kuroda, T, Kubori, T, Uchida, Y, Nagai, H, Imada, K.
Deposit date:2014-09-18
Release date:2015-06-10
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Molecular and structural analysis of Legionella DotI gives insights into an inner membrane complex essential for type IV secretion
Sci Rep, 5, 2015
3AJ4
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BU of 3aj4 by Molmil
Crystal structure of the PH domain of Evectin-2 from human complexed with O-phospho-L-serine
Descriptor: 1,2-ETHANEDIOL, PHOSPHOSERINE, Pleckstrin homology domain-containing family B member 2
Authors:Okazaki, S, Kato, R, Wakatsuki, S.
Deposit date:2010-05-21
Release date:2011-05-25
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1 Å)
Cite:Intracellular phosphatidylserine is essential for retrograde membrane traffic through endosomes
Proc.Natl.Acad.Sci.USA, 108, 2011
1V4P
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BU of 1v4p by Molmil
Crystal structure of Alanyl-tRNA Synthetase from Pyrococcus horikoshii OT3
Descriptor: ZINC ION, alanyl-tRNA synthetase
Authors:Ishijima, J, Yutani, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-11-14
Release date:2004-11-23
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of alanyl-tRNA synthetase editing-domain homolog (PH0574) from a hyperthermophile, Pyrococcus horikoshii OT3 at 1.45 A resolution
Proteins, 62, 2006
3W67
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BU of 3w67 by Molmil
Crystal structure of mouse alpha-tocopherol transfer protein in complex with alpha-tocopherol and phosphatidylinositol-(3,4)-bisphosphate
Descriptor: (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL, (2R)-3-{[(S)-hydroxy{[(1S,2R,3R,4S,5S,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dibutanoate, Alpha-tocopherol transfer protein
Authors:Ohto, U, Satow, Y.
Deposit date:2013-02-11
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Impaired alpha-TTP-PIPs interaction underlies familial vitamin E deficiency
Science, 340, 2013
3W68
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BU of 3w68 by Molmil
Crystal structure of mouse alpha-tocopherol transfer protein in complex with alpha-tocopherol and phosphatidylinositol-(4,5)-bisphosphate
Descriptor: (2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL, (2R)-3-{[(R)-HYDROXY{[(1R,2R,3S,4R,5R,6S)-2,3,6-TRIHYDROXY-4,5-BIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}PHOSPHORYL]OXY}PROPANE-1 ,2-DIYL DIBUTANOATE, (2R)-3-{[(S)-{[(2S,3R,5S,6S)-2,6-DIHYDROXY-3,4,5-TRIS(PHOSPHONOOXY)CYCLOHEXYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-(1-HYDROXY BUTOXY)PROPYL BUTYRATE, ...
Authors:Ohto, U, Satow, Y.
Deposit date:2013-02-11
Release date:2013-05-01
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Impaired alpha-TTP-PIPs interaction underlies familial vitamin E deficiency
Science, 340, 2013
3VIA
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BU of 3via by Molmil
Crystal structure of the PH domain of Evectin-2 from human
Descriptor: Pleckstrin homology domain-containing family B member 2
Authors:Okazaki, S, Kato, R, Wakatsuki, S.
Deposit date:2011-09-26
Release date:2012-01-25
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural basis of the strict phospholipid binding specificity of the pleckstrin homology domain of human evectin-2
Acta Crystallogr.,Sect.D, 68, 2012
3X0V
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BU of 3x0v by Molmil
Structure of L-lysine oxidase
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, L-lysine oxidase
Authors:Sano, T, Uchida, Y, Amano, M, Kawaguchi, T, Kondo, H, Inagaki, K, Imada, K.
Deposit date:2014-10-22
Release date:2015-04-08
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Recombinant expression, molecular characterization and crystal structure of antitumor enzyme, l-lysine alpha-oxidase from Trichoderma viride.
J.Biochem., 157, 2015

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PDB entries from 2024-03-27

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