Author results

3WIT
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CRYSTAL STRUCTURE OF THE C-TERMINAL REGION OF VGRG1 FROM E. COLI O157 EDL933
Descriptor:Putative Vgr protein
Authors:Uchida, K., Leiman, P.G., Arisaka, F., Kanamaru, S.
Deposit date:2013-09-25
Release date:2013-12-18
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure and properties of the C-terminal beta-helical domain of VgrG protein from Escherichia coli O157
J.Biochem., 155, 2014
1GT9
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HIGH RESOLUTION CRYSTAL STRUCTURE OF A THERMOSTABLE SERINE-CARBOXYL TYPE PROTEINASE, KUMAMOLISIN (KSCP)
Descriptor:KUMAMOLYSIN, CALCIUM ION, SULFATE ION
Authors:Comellas-Bigler, M., Fuentes-Prior, P., Maskos, K., Huber, R., Oyama, H., Uchida, K., Dunn, B.M., Oda, K., Bode, W.
Deposit date:2002-01-14
Release date:2002-06-13
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:The 1.4 A Crystal Structure of Kumamolysin. A Thermostable Serine-Carboxyl-Type Proteinase
Structure, 10, 2002
1GTG
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CRYSTAL STRUCTURE OF THE THERMOSTABLE SERINE-CARBOXYL TYPE PROTEINASE, KUMAMOLYSIN (KSCP)
Descriptor:KUMAMOLYSIN, CALCIUM ION
Authors:Comellas-Bigler, M., Fuentes-Prior, P., Maskos, K., Huber, R., Oyama, H., Uchida, K., Dunn, B.M., Oda, K., Bode, W.
Deposit date:2002-01-15
Release date:2002-06-13
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The 1.4 A Crystal Structure of Kumamolysin. A Thermostable Serine-Carboxyl-Type Proteinase
Structure, 10, 2002
1GTJ
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CRYSTAL STRUCTURE OF THE THERMOSTABLE SERINE-CARBOXYL TYPE PROTEINASE, KUMAMOLISIN (KSCP) - COMPLEX WITH AC-ILE-ALA-PHE-CHO
Descriptor:KUMAMOLYSIN, ALDEHYDE INHIBITOR, SULFATE ION, ...
Authors:Comellas-Bigler, M., Fuentes-Prior, P., Maskos, K., Huber, R., Oyama, H., Uchida, K., Dunn, B.M., Oda, K., Bode, W.
Deposit date:2002-01-15
Release date:2002-06-13
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The 1.4 A Crystal Structure of Kumamolysin. A Thermostable Serine-Carboxyl-Type Proteinase
Structure, 10, 2002
1GTL
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THE THERMOSTABLE SERINE-CARBOXYL TYPE PROTEINASE, KUMAMOLISIN (KSCP) - COMPLEX WITH AC-ILE-PRO-PHE-CHO
Descriptor:KUMAMOLYSIN, ALDEHYDE INHIBITOR, CALCIUM ION, ...
Authors:Comellas-Bigler, M., Fuentes-Prior, P., Maskos, K., Huber, R., Oyama, H., Uchida, K., Dunn, B.M., Oda, K., Bode, W.
Deposit date:2002-01-16
Release date:2002-06-13
Last modified:2018-02-28
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The 1.4 A Crystal Structure of Kumamolysin. A Thermostable Serine-Carboxyl-Type Proteinase
Structure, 10, 2002
6M8W
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PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR AIAF
Descriptor:SEDOLISIN, AIAF PEPTIDE INHIBITOR, CALCIUM ION, ...
Authors:Wlodawer, A., Li, M., Gustchina, A., Dauter, Z., Uchida, K., Oyama, H., Goldfarb, N.E., Dunn, B.M., Oda, K.
Deposit date:2018-08-22
Release date:2018-10-24
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
6M8Y
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PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR AIPF
Descriptor:SEDOLISIN, AIPF PEPTIDE INHIBITOR, CALCIUM ION, ...
Authors:Wlodawer, A., Li, M., Gustchina, A., Dauter, Z., Uchida, K., Oyama, H., Goldfarb, N.E., Dunn, B.M., Oda, K.
Deposit date:2018-08-22
Release date:2018-10-24
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
6M9C
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PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR PSEUDOTYROSTATIN
Descriptor:SEDOLISIN, Pseudotyrostatin, CALCIUM ION, ...
Authors:Wlodawer, A., Li, M., Gustchina, A., Dauter, Z., Uchida, K., Oyama, H., Goldfarb, N.E., Dunn, B.M., Oda, K.
Deposit date:2018-08-23
Release date:2018-10-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
6M9D
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PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR CHYMOSTATIN
Descriptor:SEDOLISIN, Chymostatin A, CALCIUM ION
Authors:Wlodawer, A., Li, M., Gustchina, A., Dauter, Z., Uchida, K., Oyama, H., Goldfarb, N.E., Dunn, B.M., Oda, K.
Deposit date:2018-08-23
Release date:2018-10-24
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
6M9F
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PSEUDOMONAS SERINE-CARBOXYL PROTEINASE (SEDOLISIN) COMPLEXED WITH THE INHIBITOR TYROSTATIN
Descriptor:SEDOLISIN, Tyrostatin, CALCIUM ION, ...
Authors:Wlodawer, A., Li, M., Gustchina, A., Dauter, Z., Uchida, K., Oyama, H., Goldfarb, N.E., Dunn, B.M., Oda, K.
Deposit date:2018-08-23
Release date:2018-10-24
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Inhibitor complexes of the Pseudomonas serine-carboxyl proteinase
Biochemistry, 40, 2001
1GA4
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CRYSTAL STRUCTURE ANALYSIS OF PSCP (PSEUDOMONAS SERINE-CARBOXYL PROTEINASE) COMPLEXED WITH INHIBITOR PSEUDOIODOTYROSTATIN (THIS ENZYME RENAMED "SEDOLISIN" IN 2003)
Descriptor:SERINE-CARBOXYL PROTEINASE, PSEUDOIODOTYROSTATIN, CALCIUM ION, ...
Authors:Wlodawer, A., Li, M., Dauter, Z., Gustchina, A., Uchida, K.
Deposit date:2000-11-29
Release date:2000-12-13
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Carboxyl proteinase from Pseudomonas defines a novel family of subtilisin-like enzymes.
Nat.Struct.Biol., 8, 2001
1GA6
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CRYSTAL STRUCTURE ANALYSIS OF PSCP (PSEUDOMONAS SERINE-CARBOXYL PROTEINASE) COMPLEXED WITH A FRAGMENT OF TYROSTATIN (THIS ENZYME RENAMED "SEDOLISIN" IN 2003)
Descriptor:SERINE-CARBOXYL PROTEINASE, FRAGMENT OF TYROSTATIN, CALCIUM ION, ...
Authors:Wlodawer, A., Li, M., Dauter, Z., Gustchina, A., Uchida, K.
Deposit date:2000-11-29
Release date:2000-12-13
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1 Å)
Cite:Carboxyl proteinase from Pseudomonas defines a novel family of subtilisin-like enzymes.
Nat.Struct.Biol., 8, 2001
2Z7U
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CRYSTAL STRUCTURE OF H2O2 TREATED CU,ZN-SOD
Descriptor:Superoxide dismutase [Cu-Zn], ZINC ION, COPPER (II) ION
Authors:Ito, S., Ishii, T., Uchida, K.
Deposit date:2007-08-28
Release date:2008-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of H2O2-treated Cu,Zn-superoxide dismutase
To be Published
2Z7W
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CRYSTAL STRUCTURE OF H2O2 TREATED CU,ZN-SOD
Descriptor:Superoxide dismutase [Cu-Zn], ZINC ION, COPPER (II) ION
Authors:Ito, S., Ishii, T., Uchida, K.
Deposit date:2007-08-29
Release date:2008-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of H2O2-treated Cu,Zn-superoxide dismutase
To be Published
2Z7Y
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CRYSTAL STRUCTURE OF H2O2 TREATED CU,ZN-SOD
Descriptor:Superoxide dismutase [Cu-Zn], ZINC ION, COPPER (II) ION
Authors:Ito, S., Ishii, T., Uchida, K.
Deposit date:2007-08-30
Release date:2008-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal structure of H2O2-treated Cu,Zn-superoxide dismutase
To be Published
2Z7Z
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CRYSTAL STRUCTURE OF H2O2 TREATED CU,ZN-SOD
Descriptor:Superoxide dismutase [Cu-Zn], ZINC ION, COPPER (II) ION
Authors:Ito, S., Ishii, T., Uchida, K.
Deposit date:2007-08-30
Release date:2008-09-02
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of H2O2-treated Cu,Zn-superoxide dismutase
To be Published
2ZOW
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CRYSTAL STRUCTURE OF H2O2 TREATED CU,ZN-SOD
Descriptor:Superoxide dismutase [Cu-Zn], ZINC ION, COPPER (I) ION
Authors:Ito, S., Ishii, T., Sakai, H., Uchida, K.
Deposit date:2008-06-11
Release date:2009-06-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structures of H2O2-treated Cu,Zn-superoxide dismutase
To be Published
2DDQ
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CRYSTAL STRUCTURE OF THE FAB FRAGMENT OF A R310 ANTIBODY COMPLEXED WITH (R)-HNE-HISTIDINE ADDUCT
Descriptor:R310 antibody heavy chain, R310 antibody light chain, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:Ito, S.
Deposit date:2006-02-02
Release date:2006-07-11
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Bispecific abs against modified protein and DNA with oxidized lipids
Proc.Natl.Acad.Sci.Usa, 103, 2006
1NLU
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PSEUDOMONAS SEDOLISIN (SERINE-CARBOXYL PROTEINASE) COMPLEXED WITH TWO MOLECULES OF PSEUDO-IODOTYROSTATIN
Descriptor:SEDOLISIN, PSEUDO-IODOTYROSTATIN, CALCIUM ION
Authors:Wlodawer, A., Li, M., Gustchina, A., Dauter, Z., Uchida, K., Oyama, H., Glodfarb, N.E., Dunn, B.M., Oda, K.
Deposit date:2003-01-07
Release date:2004-01-20
Last modified:2012-12-12
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Two inhibitor molecules bound in the active site of Pseudomonas sedolisin: a model for the bi-product complex following cleavage of a peptide substrate.
Biochem.Biophys.Res.Commun., 314, 2004
3A73
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CRYSTAL STRUCTURE ANALYSIS OF HUMAN SERUM ALBUMIN COMPLEXED WITH DELTA 12-PROSTAGLANDIN J2
Descriptor:Serum albumin, MYRISTIC ACID, (5Z,12Z,15S)-15-hydroxy-11-oxoprosta-5,9,12-trien-1-oic acid
Authors:Ito, S.
Deposit date:2009-09-11
Release date:2010-01-19
Last modified:2013-10-23
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Delta12-prostaglandin J2 as a product and ligand of human serum albumin: formation of an unusual covalent adduct at His146.
J.Am.Chem.Soc., 132, 2010
3V39
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BD3459, A PREDATORY PEPTIDOGLYCAN ENDOPEPTIDASE FROM BDELLOVIBRIO BACTERIOVORUS
Descriptor:D-alanyl-D-alanine carboxypeptidase, 2-AMINOETHANESULFONIC ACID, SULFATE ION, ...
Authors:Lovering, A.L., Lerner, T.R., Sockett, R.E.
Deposit date:2011-12-13
Release date:2012-02-22
Last modified:2012-04-11
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Specialized peptidoglycan hydrolases sculpt the intra-bacterial niche of predatory Bdellovibrio and increase population fitness.
Plos Pathog., 8, 2012
4LV0
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AMPC BETA-LACTAMASE IN COMPLEX WITH M-AMINOPHENYL BORONIC ACID
Descriptor:Beta-lactamase, M-AMINOPHENYLBORONIC ACID, PHOSPHATE ION
Authors:London, N., Eidam, O., Shoichet, B.K.
Deposit date:2013-07-25
Release date:2014-07-30
Last modified:2014-11-26
Method:X-RAY DIFFRACTION (1.652 Å)
Cite:Covalent docking of large libraries for the discovery of chemical probes.
Nat.Chem.Biol., 10, 2014
4LV1
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AMPC BETA-LACTAMASE IN COMPLEX WITH [1-(3-CHLOROPHENYL)-1H-PYRAZOL-4-YL] BORONIC ACID
Descriptor:Beta-lactamase, [1-(3-chlorophenyl)-1H-pyrazol-4-yl]boronic acid, PHOSPHATE ION
Authors:London, N., Eidam, O., Shoichet, B.K.
Deposit date:2013-07-25
Release date:2014-07-30
Last modified:2014-11-26
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Covalent docking of large libraries for the discovery of chemical probes.
Nat.Chem.Biol., 10, 2014
4LV2
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AMPC BETA-LACTAMASE IN COMPLEX WITH [1-(6-CHLOROPYRIMIDIN-4-YL)-1H-PYRAZOL-4-YL] BORONIC ACID
Descriptor:Beta-lactamase, [1-(6-chloropyrimidin-4-yl)-1H-pyrazol-4-yl]boronic acid, PHOSPHATE ION
Authors:London, N., Eidam, O., Shoichet, B.K.
Deposit date:2013-07-25
Release date:2014-07-30
Last modified:2014-11-26
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Covalent docking of large libraries for the discovery of chemical probes.
Nat.Chem.Biol., 10, 2014
4LV3
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AMPC BETA-LACTAMASE IN COMPLEX WITH (3,5-DI-TERT-BUTYLPHENYL) BORONIC ACID
Descriptor:Beta-lactamase, (3,5-di-tert-butylphenyl)boronic acid, PHOSPHATE ION
Authors:London, N., Eidam, O., Shoichet, B.K.
Deposit date:2013-07-25
Release date:2014-07-30
Last modified:2014-11-26
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Covalent docking of large libraries for the discovery of chemical probes.
Nat.Chem.Biol., 10, 2014
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