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7OJ9
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BU of 7oj9 by Molmil
NMR solution structure of SNX9 SH3 - EEEV nsP3 peptide complex
Descriptor: EEEV nsP3 peptide, Sorting nexin-9
Authors:Tossavainen, H, Permi, P.
Deposit date:2021-05-14
Release date:2022-04-13
Last modified:2022-06-15
Method:SOLUTION NMR
Cite:Structure of SNX9 SH3 in complex with a viral ligand reveals the molecular basis of its unique specificity for alanine-containing class I SH3 motifs.
Structure, 30, 2022
5I22
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BU of 5i22 by Molmil
Amphiphysin SH3 in complex with Chikungunya virus nsP3 peptide
Descriptor: CHIKV nsP3 peptide, Myc box-dependent-interacting protein 1
Authors:Tossavainen, H, Aitio, O, Hellman, M, Saksela, K, Permi, P.
Deposit date:2016-02-04
Release date:2016-06-15
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural Basis of the High Affinity Interaction between the Alphavirus Nonstructural Protein-3 (nsP3) and the SH3 Domain of Amphiphysin-2.
J.Biol.Chem., 291, 2016
1NYA
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BU of 1nya by Molmil
NMR SOLUTION STRUCTURE OF CALERYTHRIN, AN EF-HAND CALCIUM-BINDING PROTEIN
Descriptor: CALCIUM ION, Calerythrin
Authors:Tossavainen, H, Permi, P, Annila, A, Kilpelainen, I, Drakenberg, T.
Deposit date:2003-02-12
Release date:2003-08-05
Last modified:2021-10-27
Method:SOLUTION NMR
Cite:NMR solution structure of calerythrin, an EF-hand calcium-binding protein from Saccharopolyspora erythraea
Eur.J.Biochem., 270, 2003
2BBX
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BU of 2bbx by Molmil
NMR solution structure of the TSR domain of malaria TRAP protein
Descriptor: Thrombospondin-related anonymous protein
Authors:Tossavainen, H, Permi, P, Kilpelainen, I.
Deposit date:2005-10-18
Release date:2006-08-08
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:The layered fold of the TSR domain of P. falciparum TRAP contains a heparin binding site.
Protein Sci., 15, 2006
5NMY
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BU of 5nmy by Molmil
NMR solution structure of lysostaphin
Descriptor: Lysostaphin, ZINC ION
Authors:Tossavainen, H, Raulinaitis, V, Permi, P.
Deposit date:2017-04-07
Release date:2018-05-16
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural and Functional Insights Into Lysostaphin-Substrate Interaction.
Front Mol Biosci, 5, 2018
1ZK6
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BU of 1zk6 by Molmil
NMR solution structure of B. subtilis PrsA PPIase
Descriptor: Foldase protein prsA
Authors:Tossavainen, H, Permi, P, Purhonen, S.L, Sarvas, M, Kilpelainen, I, Seppala, R.
Deposit date:2005-05-02
Release date:2006-03-28
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:NMR solution structure and characterization of substrate binding site of the PPIase domain of PrsA protein from Bacillus subtilis
Febs Lett., 580, 2006
2MF6
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BU of 2mf6 by Molmil
Solution NMR structure of Chimeric Avidin, ChiAVD(I117Y), in the biotin bound form
Descriptor: Avidin, Avidin-related protein 4/5
Authors:Tossavainen, H, Kukkurainen, S, Maatta, J.A.E, Pihlajamaa, T, Hytonen, V.P, Kulomaa, M.S, Permi, P.
Deposit date:2013-10-07
Release date:2014-08-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Chimeric Avidin - NMR Structure and Dynamics of a 56 kDa Homotetrameric Thermostable Protein
Plos One, 9, 2014
1SZL
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BU of 1szl by Molmil
F-spondin TSR domain 1
Descriptor: F-spondin
Authors:Tossavainen, H, Paakkonen, K, Permi, P, Kilpelainen, I, Guntert, P.
Deposit date:2004-04-06
Release date:2005-04-19
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structures of the first and fourth TSR domains of F-spondin
Proteins, 64, 2006
5KQC
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BU of 5kqc by Molmil
Identification and structural characterization of LytU
Descriptor: Peptidase M23, ZINC ION
Authors:Tossavainen, H, Raulinaitis, V, Permi, P.
Deposit date:2016-07-06
Release date:2017-08-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Identification and structural characterization of LytU, a unique peptidoglycan endopeptidase from the lysostaphin family.
Sci Rep, 7, 2017
5N9Q
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BU of 5n9q by Molmil
Structure of A. thaliana RCD1(468-567)
Descriptor: Inactive poly [ADP-ribose] polymerase RCD1
Authors:Tossavainen, H, Hellman, M, Vainonen, J, Kangasjarvi, J, Permi, P.
Deposit date:2017-02-27
Release date:2018-03-14
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors.
Elife, 8, 2019
2N1U
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BU of 2n1u by Molmil
Structure of SAP30L corepressor protein
Descriptor: Histone deacetylase complex subunit SAP30L, ZINC ION
Authors:Tossavainen, H, Permi, P.
Deposit date:2015-04-23
Release date:2015-11-25
Last modified:2016-03-23
Method:SOLUTION NMR
Cite:Redox-dependent disulfide bond formation in SAP30L corepressor protein: Implications for structure and function.
Protein Sci., 25, 2016
1VEX
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BU of 1vex by Molmil
F-spondin TSR domain 4
Descriptor: F-spondin
Authors:Paakkonen, K, Tossavainen, H, Permi, P, Kilpelainen, I, Guntert, P.
Deposit date:2004-04-06
Release date:2005-04-19
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structures of the first and fourth TSR domains of F-spondin
Proteins, 64, 2006
2V6Z
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BU of 2v6z by Molmil
Solution Structure of Amino-Terminal Domain of Human DNA Polymerase Epsilon Subunit B
Descriptor: DNA POLYMERASE EPSILON SUBUNIT 2
Authors:Nuutinen, T, Fredriksson, K, Tossavainen, H, Pospiech, H, Pirila, P, Permi, P, Annila, A, Syvaoja, J.E.
Deposit date:2007-07-24
Release date:2008-08-05
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Solution Structure of the Amino-Terminal Domain of Human DNA Polymerase Epsilon Subunit B is Homologous to C-Domains of Aaa+ Proteins.
Nucleic Acids Res., 36, 2008
2ALB
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BU of 2alb by Molmil
NMR structure of the N-terminal domain a of the glycoprotein chaperone ERp57
Descriptor: Protein disulfide-isomerase A3
Authors:Silvennoinen, L, Tossavainen, H, Myllyharju, J, Permi, P.
Deposit date:2005-08-05
Release date:2006-08-15
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:NMR structure of the N-terminal domain a of the glycoprotein chaperone ERp57
To be Published
2JZV
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BU of 2jzv by Molmil
Solution structure of S. aureus PrsA-PPIase
Descriptor: Foldase protein prsA
Authors:Seppala, R, Tossavainen, H, Heikkinen, S, Koskela, H, Kontinen, V, Permi, P.
Deposit date:2008-01-21
Release date:2009-01-20
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Solution structure of the parvulin-type PPIase domain of Staphylococcus aureus PrsA - Implications for the catalytic mechanism of parvulins.
Bmc Struct.Biol., 9, 2009
2ROL
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BU of 2rol by Molmil
Structural Basis of PxxDY motif recognition in SH3 binding
Descriptor: 12-meric peptide from T-cell surface glycoprotein CD3 epsilon chain, Epidermal growth factor receptor kinase substrate 8-like protein 1
Authors:Aitio, O, Hellman, M, Kesti, T, Kleino, I, Samuilova, O, Tossavainen, H, Paakkonen, K, Saksela, K, Permi, P.
Deposit date:2008-04-02
Release date:2009-03-03
Last modified:2020-02-26
Method:SOLUTION NMR
Cite:Structural basis of PxxDY motif recognition in SH3 binding
J.Mol.Biol., 382, 2008
2UUR
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BU of 2uur by Molmil
N-terminal NC4 domain of collagen IX
Descriptor: 1,2-ETHANEDIOL, COLLAGEN ALPHA-1(IX) CHAIN, SULFATE ION, ...
Authors:Leppanen, V.-M, Tossavainen, H, Permi, P, Lehtio, L, Ronnholm, G, Goldman, A, Kilpelainen, I, Pihlajamaa, T.
Deposit date:2007-03-07
Release date:2007-06-05
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of the N-Terminal Nc4 Domain of Collagen Ix, a Zinc Binding Member of the Laminin-Neurexin-Sex Hormone Binding Globulin (Lns) Domain Family.
J.Biol.Chem., 282, 2007
5KQB
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BU of 5kqb by Molmil
Identification and structural characterization of LytU
Descriptor: Peptidase M23, ZINC ION
Authors:Raulinaitis, V, Tossavainen, H, Permi, P.
Deposit date:2016-07-06
Release date:2017-08-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Identification and structural characterization of LytU, a unique peptidoglycan endopeptidase from the lysostaphin family.
Sci Rep, 7, 2017
5N9V
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BU of 5n9v by Molmil
NMR solution structure of ubl5 domain from polyubiquitin locus of T.thermophila.
Descriptor: NAD(P)(+)--arginine ADP-ribosyltransferase
Authors:Chiarini, V, Tossavainen, H.
Deposit date:2017-02-27
Release date:2018-03-21
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:NMR structure of a non-conjugatable, ADP-ribosylation associated, ubiquitin-like domain from Tetrahymena thermophila polyubiquitin locus.
Biochim Biophys Acta Gen Subj, 1863, 2019
2K2M
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BU of 2k2m by Molmil
Structural Basis of PxxDY Motif Recognition in SH3 Binding
Descriptor: Eps8-like protein 1
Authors:Aitio, O, Hellman, M, Kesti, T, Kleino, I, Samuilova, O, Tossavainen, H, Saksela, K, Permi, P.
Deposit date:2008-04-02
Release date:2009-02-17
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis of PxxDY motif recognition in SH3 binding.
J.Mol.Biol., 382, 2008
3V8O
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BU of 3v8o by Molmil
Human Filamin C Ig - like Domains 4 and 5
Descriptor: Filamin-C, POTASSIUM ION
Authors:Sethi, R, Ylanne, J.
Deposit date:2011-12-23
Release date:2013-07-17
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A novel structural unit in the N-terminal region of filamins.
J.Biol.Chem., 289, 2014
4MGX
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BU of 4mgx by Molmil
Crystal structure of human filamin C domains 4-5 and GPIB alpha cytoplasmic domain complex
Descriptor: Filamin-C, Platelet glycoprotein Ib alpha chain
Authors:Sethi, R, Ylanne, J.
Deposit date:2013-08-29
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:A Novel Structural Unit in the N-terminal Region of Filamins.
J.Biol.Chem., 289, 2014
4M9P
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BU of 4m9p by Molmil
Crystal structure of the human filamin A Ig-like domains 3-5
Descriptor: Filamin-A
Authors:Seppala, J, Pentikainen, U, Ylanne, J.
Deposit date:2013-08-15
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:A Novel Structural Unit in the N-terminal Region of Filamins.
J.Biol.Chem., 289, 2014

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