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1CBI
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BU of 1cbi by Molmil
APO-CELLULAR RETINOIC ACID BINDING PROTEIN I
Descriptor: CELLULAR RETINOIC ACID BINDING PROTEIN I
Authors:Thompson, J.R, Bratt, J.M, Banaszak, L.J.
Deposit date:1995-07-12
Release date:1995-11-14
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of cellular retinoic acid binding protein I shows increased access to the binding cavity due to formation of an intermolecular beta-sheet.
J.Mol.Biol., 252, 1995
1YBA
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BU of 1yba by Molmil
The active form of phosphoglycerate dehydrogenase
Descriptor: 2-OXOGLUTARIC ACID, D-3-phosphoglycerate dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Thompson, J.R, Banaszak, L.J.
Deposit date:2004-12-20
Release date:2005-04-26
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Vmax Regulation through Domain and Subunit Changes. The Active Form of Phosphoglycerate Dehydrogenase
Biochemistry, 44, 2005
1LSH
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BU of 1lsh by Molmil
LIPID-PROTEIN INTERACTIONS IN LIPOVITELLIN
Descriptor: LIPOVITELLIN (LV-1N, LV-1C), LIPOVITELLIN (LV-2), ...
Authors:Thompson, J.R, Banaszak, L.J.
Deposit date:2002-05-17
Release date:2002-07-31
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Lipid-protein interactions in lipovitellin.
Biochemistry, 41, 2002
2GGM
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BU of 2ggm by Molmil
Human centrin 2 xeroderma pigmentosum group C protein complex
Descriptor: CALCIUM ION, Centrin-2, DNA-repair protein complementing XP-C cells
Authors:Thompson, J.R.
Deposit date:2006-03-24
Release date:2006-04-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:The structure of the human centrin 2-xeroderma pigmentosum group C protein complex.
J.Biol.Chem., 281, 2006
3DVI
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BU of 3dvi by Molmil
Crystal structure of kappa 1 amyloidogenic light chain variable domain
Descriptor: Amyloidogenic light chain variable domain AL-103
Authors:Thompson, J.R, Randles, E.G, Ramirez-Alvarado, M.
Deposit date:2008-07-18
Release date:2009-05-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural alterations within native amyloidogenic immunoglobulin light chains.
J.Mol.Biol., 389, 2009
4K07
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BU of 4k07 by Molmil
Crystal structure of the amyloid-forming immunoglobulin AL-103 cis-proline 95 mutant
Descriptor: Amyloidogenic immunoglobulin light chain protein AL-103, SULFATE ION
Authors:Thompson, J.R, Berkholz, D.S, Mahlum, E.W, Ramirez-Alvarado, M.
Deposit date:2013-04-03
Release date:2013-10-30
Last modified:2014-01-22
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:Kinetic control in protein folding for light chain amyloidosis and the differential effects of somatic mutations.
J.Mol.Biol., 426, 2014
2Q20
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BU of 2q20 by Molmil
Structure of the germline Vk1 O18/O8 light chain variable domain homodimer
Descriptor: Vk1 O18/O8 germline light chain variable domain
Authors:Thompson, J.R, Ramirez-Alvarado, M, Baden, E.M.
Deposit date:2007-05-25
Release date:2008-04-08
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Altered dimer interface decreases stability in an amyloidogenic protein.
J.Biol.Chem., 283, 2008
2Q1E
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BU of 2q1e by Molmil
Altered dimer interface decreases stability in an amyloidogenic kappa1 Bence Jones protein.
Descriptor: Amyloidogenic immunoglobulin light chain protein AL-09, SULFATE ION
Authors:Thompson, J.R, Ramirez-Alvarado, M, Baden, E.M.
Deposit date:2007-05-24
Release date:2008-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Altered dimer interface decreases stability in an amyloidogenic protein.
J.Biol.Chem., 283, 2008
4W8T
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BU of 4w8t by Molmil
Crystal structure of truncated hemolysin A Q125S from P. mirabilis at 1.5 Angstroms resolution
Descriptor: Hemolysin
Authors:Novak, W.R.P, Glasgow, E, Thompson, J.R, Weaver, T.M.
Deposit date:2014-08-26
Release date:2015-10-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.539 Å)
Cite:Crystal structure of truncated hemolysin A Q125S from P. mirabilis at 1.5 Angstroms resolution
To Be Published
4W8R
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BU of 4w8r by Molmil
Crystal structure of hemolysin A Y134F from P. mirabilis at 1.5 Angstroms resolution
Descriptor: Hemolysin
Authors:Novak, W.R.P, Glasgow, E, Thompson, J.R, Weaver, T.M.
Deposit date:2014-08-26
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.519 Å)
Cite:Crystal structure of hemolysin A Y134F from P. mirabilis at 1.5 Angstroms resolution
To Be Published
6CO2
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BU of 6co2 by Molmil
Structure of an engineered protein (NUDT16TI) in complex with 53BP1 Tudor domains
Descriptor: NUDT16-Tudor-interacting (NUDT16TI), TP53-binding protein 1
Authors:Botuyan, M.V, Thompson, J.R, Cui, G, Mer, G.
Deposit date:2018-03-10
Release date:2018-06-06
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Mechanism of 53BP1 activity regulation by RNA-binding TIRR and a designer protein.
Nat. Struct. Mol. Biol., 25, 2018
7RR9
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BU of 7rr9 by Molmil
Cryo-EM Structure of Nanodisc reconstituted ABCD1 in nucleotide bound outward open conformation
Descriptor: ATP-binding cassette sub-family D member 1, CHOLESTEROL, MAGNESIUM ION, ...
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2021-08-09
Release date:2022-01-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structures of the human peroxisomal fatty acid transporter ABCD1 in a lipid environment
Commun Biol, 5, 2022
7RRA
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BU of 7rra by Molmil
Cryo-EM Structure of Nanodisc reconstituted ABCD1 in inward open conformation
Descriptor: ATP-binding cassette sub-family D member 1
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2021-08-09
Release date:2022-01-19
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structures of the human peroxisomal fatty acid transporter ABCD1 in a lipid environment
Commun Biol, 5, 2022
5KZ5
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BU of 5kz5 by Molmil
Architecture of the Human Mitochondrial Iron-Sulfur Cluster Assembly Machinery: the Complex Formed by the Iron Donor, the Sulfur Donor, and the Scaffold
Descriptor: Cysteine desulfurase, mitochondrial, Frataxin, ...
Authors:Gakh, O, Ranatunga, W, Smith, D.Y, Ahlgren, E.C, Al-Karadaghi, S, Thompson, J.R, Isaya, G.
Deposit date:2016-07-22
Release date:2016-08-31
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (14.3 Å)
Cite:Architecture of the Human Mitochondrial Iron-Sulfur Cluster Assembly Machinery.
J.Biol.Chem., 291, 2016
2B02
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BU of 2b02 by Molmil
Crystal Structure of ARNT PAS-B Domain
Descriptor: Aryl hydrocarbon receptor nuclear translocator
Authors:Lee, J, Botuyan, M.V, Nomine, Y, Ohh, M, Thompson, J.R, Mer, G.
Deposit date:2005-09-12
Release date:2006-10-24
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal Structure and Binding Properties of ARNT PAS-B Heterodimerization Domain
To be Published
8EEB
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BU of 8eeb by Molmil
Cryo-EM structure of human ABCA7 in Digitonin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Phospholipid-transporting ATPase ABCA7, ...
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2022-09-06
Release date:2022-12-21
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM structures of human ABCA7 provide insights into its phospholipid translocation mechanisms.
Embo J., 42, 2023
4W8S
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BU of 4w8s by Molmil
Crystal structure of truncated hemolysin A Q125S/Y134S from P. mirabilis at 1.5 Angstroms resolution
Descriptor: Hemolysin
Authors:Novak, W.R.P, Glasgow, E, Thompson, J.R, Weaver, T.M.
Deposit date:2014-08-26
Release date:2015-10-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.511 Å)
Cite:Crystal structure of truncated hemolysin A Q125S/Y134S from P. mirabilis at 1.5 Angstroms resolution
To Be Published
8EE6
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BU of 8ee6 by Molmil
Cryo-EM Structure of human ABCA7 in PE/Ch nanodiscs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, Phospholipid-transporting ATPase ABCA7, ...
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2022-09-06
Release date:2022-12-21
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Cryo-EM structures of human ABCA7 provide insights into its phospholipid translocation mechanisms.
Embo J., 42, 2023
8EDW
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BU of 8edw by Molmil
Cryo-EM Structure of human ABCA7 in BPL/Ch Nanodiscs
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, ...
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2022-09-06
Release date:2022-12-21
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Cryo-EM structures of human ABCA7 provide insights into its phospholipid translocation mechanisms.
Embo J., 42, 2023
8EOP
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BU of 8eop by Molmil
Cryo-EM Structure of Nanodisc reconstituted human ABCA7 EQ mutant in ATP bound closed state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Alam, A, Le, L.T.M, Thompson, J.R.
Deposit date:2022-10-04
Release date:2022-12-21
Last modified:2023-02-15
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Cryo-EM structures of human ABCA7 provide insights into its phospholipid translocation mechanisms.
Embo J., 42, 2023
3CDC
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BU of 3cdc by Molmil
kI O18/O8 N34I/Y87H immunoglobulin light chain variable domain
Descriptor: Light Chain Amyloidogenic
Authors:Baden, E.M, Randles, E.G, Thompson, J.R, Ramirez-Alvarado, M.
Deposit date:2008-02-26
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural insights into the role of mutations in amyloidogenesis.
J.Biol.Chem., 283, 2008
3CDY
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BU of 3cdy by Molmil
AL-09 H87Y, immunoglobulin light chain variable domain
Descriptor: IMMUNOGLOBULIN LIGHT CHAIN
Authors:Baden, E.M, Randles, E.G, Aboagye, A.K, Thompson, J.R, Ramirez-Alvarado, M.
Deposit date:2008-02-27
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Structural insights into the role of mutations in amyloidogenesis.
J.Biol.Chem., 283, 2008
3CDF
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BU of 3cdf by Molmil
kI O18/O8 Y87H immunoglobulin light chain variable domain
Descriptor: IMMUNOGLOBULIN LIGHT CHAIN
Authors:Baden, E.M, Randles, E.G, Thompson, J.R, Ramirez-Alvarado, M.
Deposit date:2008-02-26
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Structural insights into the role of mutations in amyloidogenesis.
J.Biol.Chem., 283, 2008
3DVF
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BU of 3dvf by Molmil
Structure of amyloidogenic kappa 1 Bence Jones protein
Descriptor: Amyloidogenic immunoglobulin light chain protein AL-12
Authors:Randles, E.G, Thompson, J.R, Ramirez-Alvarado, M.
Deposit date:2008-07-18
Release date:2009-05-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural alterations within native amyloidogenic immunoglobulin light chains.
J.Mol.Biol., 389, 2009
3SD4
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BU of 3sd4 by Molmil
Crystal structure of the first Tudor domain of human PHF20
Descriptor: PHD finger protein 20
Authors:Cui, G, Botuyan, M.V, Thompson, J.R, Mer, G.
Deposit date:2011-06-08
Release date:2011-06-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.928 Å)
Cite:PHF20 is an effector protein of p53 double lysine methylation that stabilizes and activates p53.
Nat.Struct.Mol.Biol., 19, 2012

 

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