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4QDL
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BU of 4qdl by Molmil
Crystal structure of E.coli Cas1-Cas2 complex
Descriptor: CRISPR-associated endonuclease Cas1, CRISPR-associated endoribonuclease Cas2
Authors:Tamulaitiene, G, Sinkunas, T, Silanskas, A, Gasiunas, G, Grazulis, S, Siksnys, V.
Deposit date:2014-05-14
Release date:2014-05-28
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of E.coli Cas1-Cas2 complex
To be Published
8BTO
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BU of 8bto by Molmil
Helical structure of BcThsA in complex with 1''-3'gcADPR
Descriptor: (2R,3R,3aS,5S,6R,7S,8R,11R,13S,15aR)-2-(6-amino-9H-purin-9-yl)-3,6,7,11,13-pentahydroxyoctahydro-2H,5H,11H,13H-5,8-epoxy-11lambda~5~,13lambda~5~-furo[2,3-g][1,3,5,9,2,4]tetraoxadiphosphacyclotetradecine-11,13-dione, NAD(+) hydrolase ThsA, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Tamulaitiene, G, Sasnauskas, G, Sabonis, D.
Deposit date:2022-11-29
Release date:2024-02-21
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Activation of Thoeris antiviral system via SIR2 effector filament assembly.
Nature, 627, 2024
8BTP
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BU of 8btp by Molmil
Helical structure of BcThsA in complex with 1''-3'gc(etheno)ADPR
Descriptor: (1S,3S,4R,5R,7R,15R,16S,17R)-5-imidazo[2,1-f]purin-3-yl-10,12-bis(oxidanyl)-10,12-bis(oxidanylidene)-2,6,9,11,13,18-hexaoxa-10$l^{5},12$l^{5}-diphosphatricyclo[13.2.1.0^{3,7}]octadecane-4,16,17-triol, ETHENO-NAD, NAD(+) hydrolase ThsA
Authors:Tamulaitiene, G, Sasnauskas, G, Sabonis, D.
Deposit date:2022-11-29
Release date:2024-02-21
Last modified:2024-04-03
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:Activation of Thoeris antiviral system via SIR2 effector filament assembly.
Nature, 627, 2024
8BTN
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BU of 8btn by Molmil
Crystal structure of BcThsB
Descriptor: TIR domain-containing protein
Authors:Tamulaitiene, G, Sabonis, D.
Deposit date:2022-11-29
Release date:2024-02-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Activation of Thoeris antiviral system via SIR2 effector filament assembly.
Nature, 627, 2024
2IXS
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BU of 2ixs by Molmil
Structure of SdaI restriction endonuclease
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, SDAI RESTRICTION ENDONUCLEASE, ...
Authors:Tamulaitiene, G, Jakubauskas, A, Urbanke, C, Huber, R, Grazulis, S, Siksnys, V.
Deposit date:2006-07-11
Release date:2006-09-14
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:The Crystal Structure of the Rare-Cutting Restriction Enzyme Sdai Reveals Unexpected Domain Architecture
Structure, 14, 2006
5DWB
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BU of 5dwb by Molmil
Crystal structure of specific restriction endonuclease AgeI-DNA complex
Descriptor: DNA (5'-D(*TP*TP*CP*GP*AP*CP*CP*GP*GP*TP*CP*GP*A*)-3'), Type-2 restriction enzyme AgeI
Authors:Tamulaitiene, G, Jovaisaite, V, Grazulis, S, Siksnys, V.
Deposit date:2015-09-22
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Restriction endonuclease AgeI is a monomer which dimerizes to cleave DNA.
Nucleic Acids Res., 45, 2017
5DWA
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BU of 5dwa by Molmil
Crystal structure of pre-specific restriction endonuclease AgeI-DNA complex
Descriptor: DNA (5'-D(*TP*CP*GP*AP*CP*CP*GP*GP*TP*CP*G*)-3'), Type-2 restriction enzyme AgeI
Authors:Tamulaitiene, G, Jovaisaite, V, Grazulis, S, Siksnys, V.
Deposit date:2015-09-22
Release date:2016-10-05
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Restriction endonuclease AgeI is a monomer which dimerizes to cleave DNA.
Nucleic Acids Res., 45, 2017
5DWC
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BU of 5dwc by Molmil
Crystal structure of restriction endonuclease AgeI
Descriptor: Type-2 restriction enzyme AgeI
Authors:Tamulaitiene, G, Ramonaite, I, Grazulis, S, Siksnys, V.
Deposit date:2015-09-22
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Restriction endonuclease AgeI is a monomer which dimerizes to cleave DNA.
Nucleic Acids Res., 45, 2017
4RCT
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BU of 4rct by Molmil
Crystal structure of R-protein of NgoAVII restriction endonuclease
Descriptor: Restriction endonuclease R.NgoVII
Authors:Tamulaitiene, G, Silanskas, A, Grazulis, S, Zaremba, M, Siksnys, V.
Deposit date:2014-09-17
Release date:2014-12-24
Last modified:2014-12-31
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII.
Nucleic Acids Res., 42, 2014
4RD5
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BU of 4rd5 by Molmil
Crystal structure of R.NgoAVII restriction endonuclease B3 domain with cognate DNA
Descriptor: DNA (5'-D(*CP*CP*CP*TP*AP*AP*GP*CP*GP*GP*CP*AP*AP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*GP*AP*TP*TP*GP*CP*CP*GP*CP*TP*TP*AP*GP*G)-3'), Restriction endonuclease R.NgoVII
Authors:Tamulaitiene, G, Silanskas, A, Grazulis, S, Zaremba, M, Siksnys, V.
Deposit date:2014-09-18
Release date:2014-12-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII.
Nucleic Acids Res., 42, 2014
4RDM
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BU of 4rdm by Molmil
Crystal structure of R.NgoAVII restriction endonuclease B3 domain with cognate DNA
Descriptor: DNA (5'-D(*CP*CP*TP*AP*AP*GP*CP*GP*GP*CP*AP*AP*TP*CP*C)-3)', DNA (5'-D(*GP*GP*GP*AP*TP*TP*GP*CP*CP*GP*CP*TP*TP*AP*G)-3)', Restriction endonuclease R.NgoVII, ...
Authors:Tamulaitiene, G, Silanskas, A, Grazulis, S, Zaremba, M, Siksnys, V.
Deposit date:2014-09-19
Release date:2014-12-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of the R-protein of the multisubunit ATP-dependent restriction endonuclease NgoAVII.
Nucleic Acids Res., 42, 2014
6EKO
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BU of 6eko by Molmil
Crystal structure of Type IIP restriction endonuclease PfoI with cognate DNA
Descriptor: CALCIUM ION, DNA (5'-D(*CP*GP*CP*TP*CP*CP*CP*GP*GP*AP*GP*CP*GP*T)-3'), Restriction endonuclease PfoI
Authors:Tamulaitiene, G, Manakova, E, Jovaisaite, V, Grazulis, S, Siksnys, V.
Deposit date:2017-09-26
Release date:2018-10-10
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (2.284 Å)
Cite:Unique mechanism of target recognition by PfoI restriction endonuclease of the CCGG-family.
Nucleic Acids Res., 47, 2019
6EK1
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BU of 6ek1 by Molmil
Crystal structure of Type IIP restriction endonuclease PfoI
Descriptor: 1,2-ETHANEDIOL, restriction endonuclease PfoI
Authors:Tamulaitiene, G, Manakova, E, Jovaisaite, V, Grazulis, S, Siksnys, V.
Deposit date:2017-09-25
Release date:2018-10-10
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Unique mechanism of target recognition by PfoI restriction endonuclease of the CCGG-family.
Nucleic Acids Res., 47, 2019
6EKR
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BU of 6ekr by Molmil
Crystal structure of Type IIP restriction endonuclease Kpn2I
Descriptor: SULFATE ION, Type ii site-specific deoxyribonuclease
Authors:Tamulaitiene, G, Manakova, E, Grazulis, S, Siksnys, V.
Deposit date:2017-09-27
Release date:2018-10-10
Method:X-RAY DIFFRACTION (2.88 Å)
Cite:Crystal structure of Type IIP restriction endonuclease PfoI with cognate DNA
To Be Published
8PHJ
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BU of 8phj by Molmil
cA4-bound Cami1 in complex with 70S ribosome
Descriptor: 16S rRNA, 23S rRNA (2862-MER), 5S rRNA, ...
Authors:Tamulaitiene, G, Mogila, I, Sasnauskas, G, Tamulaitis, G.
Deposit date:2023-06-20
Release date:2023-12-13
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Ribosomal stalk-captured CARF-RelE ribonuclease inhibits translation following CRISPR signaling.
Science, 382, 2023
8PHB
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BU of 8phb by Molmil
Crystal structure of apo Cami1
Descriptor: CRISPR-associated protein, APE2256 family
Authors:Tamulaitiene, G, Tamulaitis, G, Mogila, I, Keda, K.
Deposit date:2023-06-19
Release date:2023-12-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Ribosomal stalk-captured CARF-RelE ribonuclease inhibits translation following CRISPR signaling.
Science, 382, 2023
5O63
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BU of 5o63 by Molmil
Crystal structure of UbaLAI restriction endonuclease B3 domain domain (mutant L24M L53M L95M) with cognate DNA
Descriptor: DNA (5'-D(*C*G*C*C*A*G*G*G*C*)-3'), DNA (5'-D(*G*C*C*C*T*G*G*C*G*)-3'), Restriction endonuclease UbaLAI
Authors:Tamulaitiene, G, Sasnauskas, G, Siksnys, V.
Deposit date:2017-06-05
Release date:2017-08-02
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:UbaLAI is a monomeric Type IIE restriction enzyme.
Nucleic Acids Res., 45, 2017
7ZOB
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BU of 7zob by Molmil
Metagenomic cytidine deaminase Cdd
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Metagenomic cytidine deaminase Cdd, SULFATE ION, ...
Authors:Tamulaitiene, G, Urbeliene, N, Meskys, R.
Deposit date:2022-04-25
Release date:2023-02-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Cytidine deaminases catalyze the conversion of N ( S , O ) 4 -substituted pyrimidine nucleosides.
Sci Adv, 9, 2023
7AER
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BU of 7aer by Molmil
Rebuilt and re-refined PDB entry 5yep: tri-AMPylated Shewanella oneidensis HEPN toxin in complex with MNT antitoxin
Descriptor: ADENOSINE MONOPHOSPHATE, Toxin-antitoxin system antidote Mnt family, Toxin-antitoxin system toxin HepN family
Authors:Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
Deposit date:2020-09-18
Release date:2020-12-30
Method:X-RAY DIFFRACTION (3 Å)
Cite:HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
4ZSF
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BU of 4zsf by Molmil
Crystal structure of pre-specific restriction endonuclease BsaWI-DNA complex
Descriptor: BsaWI endonuclease, CALCIUM ION, DNA, ...
Authors:Tamulaitiene, G, Rutkauskas, M, Grazulis, S, Siksnys, V.
Deposit date:2015-05-13
Release date:2015-10-07
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Functional significance of protein assemblies predicted by the crystal structure of the restriction endonuclease BsaWI.
Nucleic Acids Res., 43, 2015
7BB5
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BU of 7bb5 by Molmil
Crystal structure of anti-CRISPR protein AcrIF9
Descriptor: AcrIF9
Authors:Tamulaitiene, G, Sinkunas, T, Kupcinskaite, E.
Deposit date:2020-12-17
Release date:2021-11-24
Last modified:2022-12-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Disarming of type I-F CRISPR-Cas surveillance complex by anti-CRISPR proteins AcrIF6 and AcrIF9.
Sci Rep, 12, 2022
7AE9
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BU of 7ae9 by Molmil
Crystal structure of mono-AMPylated HEPN(R46E) toxin in complex with MNT antitoxin
Descriptor: 2',3'-DIDEOXYADENOSINE-5'-MONOPHOSPHATE, HEPN toxin, MNT ANTITOXIN
Authors:Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
Deposit date:2020-09-17
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
7AE8
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BU of 7ae8 by Molmil
Crystal structure of HEPN(R102A) toxin
Descriptor: ACETATE ION, HEPN toxin
Authors:Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
Deposit date:2020-09-17
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2 Å)
Cite:HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
7AE2
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BU of 7ae2 by Molmil
Crystal structure of HEPN(H107A-Y109F) toxin in complex with MNT antitoxin
Descriptor: HEPN toxin, MNT ANTITOXIN
Authors:Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
Deposit date:2020-09-17
Release date:2020-12-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020
7AE6
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BU of 7ae6 by Molmil
Crystal structure of di-AMPylated HEPN(R102A) toxin
Descriptor: 1,2-ETHANEDIOL, ADENOSINE MONOPHOSPHATE, HEPN toxin
Authors:Tamulaitiene, G, Sasnauskas, G, Songailiene, I, Juozapaitis, J, Siksnys, V.
Deposit date:2020-09-17
Release date:2020-12-30
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:HEPN-MNT Toxin-Antitoxin System: The HEPN Ribonuclease Is Neutralized by OligoAMPylation.
Mol.Cell, 80, 2020

 

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